RNA–Protein interactions for RNA: ENSMUST00000174387.1

Usp3-211, Transcript of Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

TSL 5 BASIC

Gene Usp3, Length 1,901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3-211ENSMUST00000174387 Krtap22-2J3QNX6 67 aa4.52□□□□□ -1.69
Usp3-211ENSMUST00000174387 Gm11559Q9D3H7 191 aa4.5□□□□□ -1.69
Usp3-211ENSMUST00000174387 Mdn1A2ANY6 5589 aaKnown RBP4.31□□□□□ -1.72
Usp3-211ENSMUST00000174387 Gm11562A0PK51 136 aa4.29□□□□□ -1.72
Usp3-211ENSMUST00000174387 Krtap4-6Q3V4B7 195 aa4.28□□□□□ -1.72
Usp3-211ENSMUST00000174387 Gm10272F7CZ33 110 aa4.22□□□□□ -1.73
Usp3-211ENSMUST00000174387 Sprr2gO70558 76 aa4.17□□□□□ -1.74
Usp3-211ENSMUST00000174387 Gm10100J3QK64 120 aa4.17□□□□□ -1.74
Usp3-211ENSMUST00000174387 Gm11596B1AQB0 205 aa4.15□□□□□ -1.74
Usp3-211ENSMUST00000174387 Gm11938Q9D3H4 131 aa4.15□□□□□ -1.75
Usp3-211ENSMUST00000174387 Sprr2dO70555 85 aa4.14□□□□□ -1.75
Usp3-211ENSMUST00000174387 Gm39115A0A1B0GSH7 232 aa4.07□□□□□ -1.76
Usp3-211ENSMUST00000174387 Gm11564A2A4L9 201 aa4.07□□□□□ -1.76
Usp3-211ENSMUST00000174387 Gm11595B1AQA7 289 aa4.07□□□□□ -1.76
Usp3-211ENSMUST00000174387 Krtap4-8B1AQA8 209 aa4.07□□□□□ -1.76
Usp3-211ENSMUST00000174387 Syne2Q6ZWQ0 6874 aaKnown RBP4.07□□□□□ -1.76
Usp3-211ENSMUST00000174387 4933428G20RikQ9D3X4 101 aa4.07□□□□□ -1.76
Usp3-211ENSMUST00000174387 Lce1kJ3QP15 125 aa4.04□□□□□ -1.76
Usp3-211ENSMUST00000174387 Mt4P47945 62 aa3.99□□□□□ -1.77
Usp3-211ENSMUST00000174387 Krtap4-9B1AQA9 244 aa3.97□□□□□ -1.77
Usp3-211ENSMUST00000174387 Krtap19-4Q925H7 84 aa3.96□□□□□ -1.78
Usp3-211ENSMUST00000174387 Lce3bQ9CQM7 98 aa3.95□□□□□ -1.78
Usp3-211ENSMUST00000174387 Gm11554B1AQB2 190 aa3.91□□□□□ -1.78
Usp3-211ENSMUST00000174387 Syne1Q6ZWR6 8799 aa3.89□□□□□ -1.79
Usp3-211ENSMUST00000174387 Gm29735A0A1B0GT06 219 aa3.84□□□□□ -1.79
Usp3-211ENSMUST00000174387 Lce1cQ9D1C5 147 aa3.83□□□□□ -1.8
Usp3-211ENSMUST00000174387 2300003K06RikA2A4M0 262 aa3.81□□□□□ -1.8
Usp3-211ENSMUST00000174387 Lce1fB9EJP6 147 aa3.81□□□□□ -1.8
Usp3-211ENSMUST00000174387 Krtap4-13Q9D7P3 165 aa3.81□□□□□ -1.8
Usp3-211ENSMUST00000174387 Fsip2A2ARZ3 6995 aa3.8□□□□□ -1.8
Usp3-211ENSMUST00000174387 Sprr2kO70562 68 aa3.8□□□□□ -1.8
Usp3-211ENSMUST00000174387 Lce3cQ91V05 98 aa3.74□□□□□ -1.81
Usp3-211ENSMUST00000174387 Lce3eF8VQJ0 98 aa3.7□□□□□ -1.82
Usp3-211ENSMUST00000174387 Lce3fQ6PAI4 98 aa3.7□□□□□ -1.82
Usp3-211ENSMUST00000174387 Gm2431E9Q8S1 172 aa3.69□□□□□ -1.82
Usp3-211ENSMUST00000174387 Lce3dE9Q8V1 98 aa3.69□□□□□ -1.82
Usp3-211ENSMUST00000174387 Sprr2iO70560 76 aa3.69□□□□□ -1.82
Usp3-211ENSMUST00000174387 Gm10142J3KMP7 120 aa3.68□□□□□ -1.82
Usp3-211ENSMUST00000174387 Krtap6-3A0A087WQL6 57 aa3.64□□□□□ -1.83
Usp3-211ENSMUST00000174387 Mt1P02802 61 aaKnown RBP3.64□□□□□ -1.83
Usp3-211ENSMUST00000174387 Gm11567Q9D141 195 aa3.63□□□□□ -1.83
Usp3-211ENSMUST00000174387 ObscnA2AAJ9 8891 aaKnown RBP3.58□□□□□ -1.84
Usp3-211ENSMUST00000174387 Sprr2hO70559 108 aa3.58□□□□□ -1.84
Usp3-211ENSMUST00000174387 Krtap5-2Q9D5Z7 189 aa3.58□□□□□ -1.84
Usp3-211ENSMUST00000174387 Lce3aQ497I5 98 aa3.54□□□□□ -1.84
Usp3-211ENSMUST00000174387 Gm11568A2A4M2 211 aa3.54□□□□□ -1.84
Usp3-211ENSMUST00000174387 Krtap9-1Q64526 186 aa3.54□□□□□ -1.84
Usp3-211ENSMUST00000174387 Krtap20-2E9Q0A8 60 aa3.51□□□□□ -1.85
Usp3-211ENSMUST00000174387 Gm45337A0A1B0GS71 263 aa3.49□□□□□ -1.85
Usp3-211ENSMUST00000174387 Sprr2eO70556 76 aa3.45□□□□□ -1.86
Usp3-211ENSMUST00000174387 Gm10153A0A1B0GRL1 320 aa3.38□□□□□ -1.87
Usp3-211ENSMUST00000174387 Krtap5-4Q62220 223 aa3.32□□□□□ -1.88
Usp3-211ENSMUST00000174387 Gm4553A0A1B0GSA9 284 aa3.31□□□□□ -1.88
Usp3-211ENSMUST00000174387 Sprr2fO70557 76 aa3.31□□□□□ -1.88
Usp3-211ENSMUST00000174387 Mt3P28184 68 aa3.28□□□□□ -1.88
Usp3-211ENSMUST00000174387 Krtap5-1Q64507 230 aa3.24□□□□□ -1.89
Usp3-211ENSMUST00000174387 Gm40460A0A1B0GR10 244 aa3.2□□□□□ -1.9
Usp3-211ENSMUST00000174387 Gm7579A0A1B0GRJ4 243 aa3.2□□□□□ -1.9
Usp3-211ENSMUST00000174387 Krtap5-5Q2TA51 241 aa3.2□□□□□ -1.9
Usp3-211ENSMUST00000174387 Gm4559A4IF42 199 aa3.13□□□□□ -1.91
Usp3-211ENSMUST00000174387 Macf1Q9QXZ0 7354 aaKnown RBP3.11□□□□□ -1.91
Usp3-211ENSMUST00000174387 Gm10024A0A0A0MQA4 119 aa3.08□□□□□ -1.92
Usp3-211ENSMUST00000174387 Hmcn1D3YXG0 5634 aa3.05□□□□□ -1.92
Usp3-211ENSMUST00000174387 Kmt2dQ6PDK2 5588 aa2.98□□□□□ -1.93
Usp3-211ENSMUST00000174387 Krtap4-16Q91W93 202 aa2.89□□□□□ -1.95
Usp3-211ENSMUST00000174387 Eppk1Q8R0W0 6548 aa2.88□□□□□ -1.95
Usp3-211ENSMUST00000174387 1110025L11RikO09048 78 aa2.77□□□□□ -1.97
Usp3-211ENSMUST00000174387 Krtap6-5Q925H3 78 aa2.77□□□□□ -1.97
Usp3-211ENSMUST00000174387 Gm11639A0A1D5RLM8 5808 aa2.75□□□□□ -1.97
Usp3-211ENSMUST00000174387 DstQ91ZU6 7393 aaKnown RBP2.73□□□□□ -1.97
Usp3-211ENSMUST00000174387 Muc19Q6PZE0 7524 aa2.62□□□□□ -1.99
Usp3-211ENSMUST00000174387 Gpr98Q8VHN7 6298 aaKnown RBP2.62□□□□□ -1.99
Usp3-211ENSMUST00000174387 Muc16A0A140LJ72 8478 aa2.61□□□□□ -1.99
Usp3-211ENSMUST00000174387 AhnakE9Q616 5656 aaKnown RBP2.56□□□□□ -2
Usp3-211ENSMUST00000174387 Sprr2bO70554 98 aa2.55□□□□□ -2
Usp3-211ENSMUST00000174387 Gm10229O08631 77 aa2.45□□□□□ -2.02
Usp3-211ENSMUST00000174387 NebE9Q1W3 7152 aa2.4□□□□□ -2.03
Usp3-211ENSMUST00000174387 Krtap21-1Q925H4 128 aa2.27□□□□□ -2.05
Usp3-211ENSMUST00000174387 Phgr1Q8K0G7 91 aa2.12□□□□□ -2.07
Usp3-211ENSMUST00000174387 Krtap6-2O08884 159 aa2.09□□□□□ -2.08
Retrieved 80 of 22,080 RNA–protein pairs in 8.6 ms