RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Lce1fB9EJP6 147 aa3.47□□□□□ -1.85
Trim40-203ENSMUST00000172711 Krtap20-2E9Q0A8 60 aa3.47□□□□□ -1.85
Trim40-203ENSMUST00000172711 Gm20537G3UYK7 97 aa3.42□□□□□ -1.86
Trim40-203ENSMUST00000172711 Krtap22-2J3QNX6 67 aa3.41□□□□□ -1.86
Trim40-203ENSMUST00000172711 Spink7Q6IE32 76 aa3.41□□□□□ -1.86
Trim40-203ENSMUST00000172711 Sprr2gO70558 76 aa3.4□□□□□ -1.86
Trim40-203ENSMUST00000172711 Gm3880A0A1B0GSB3 72 aa3.39□□□□□ -1.87
Trim40-203ENSMUST00000172711 CriptO70333 101 aa3.39□□□□□ -1.87
Trim40-203ENSMUST00000172711 Defb1P56386 69 aa3.39□□□□□ -1.87
Trim40-203ENSMUST00000172711 BC029722A0A0N4SW31 51 aa3.38□□□□□ -1.87
Trim40-203ENSMUST00000172711 4930507D05RikQ8C9C9 103 aa3.38□□□□□ -1.87
Trim40-203ENSMUST00000172711 Eppk1Q8R0W0 6548 aa3.34□□□□□ -1.87
Trim40-203ENSMUST00000172711 2310046K23RikA0A0A6YVW6 87 aa3.34□□□□□ -1.88
Trim40-203ENSMUST00000172711 Cox6b2Q80ZN9 88 aa3.34□□□□□ -1.88
Trim40-203ENSMUST00000172711 Gm10382Q3V0T5 144 aa3.31□□□□□ -1.88
Trim40-203ENSMUST00000172711 Gm17606F6ZL36 78 aa3.28□□□□□ -1.88
Trim40-203ENSMUST00000172711 Gm9955Q8CEJ8 102 aa3.25□□□□□ -1.89
Trim40-203ENSMUST00000172711 Gm11639A0A1D5RLM8 5808 aa3.22□□□□□ -1.89
Trim40-203ENSMUST00000172711 Gm40193A0A1B0GT39 78 aa3.21□□□□□ -1.9
Trim40-203ENSMUST00000172711 Gm2431E9Q8S1 172 aa3.21□□□□□ -1.9
Trim40-203ENSMUST00000172711 Gm11567Q9D141 195 aa3.21□□□□□ -1.9
Trim40-203ENSMUST00000172711 Macf1Q9QXZ0 7354 aaKnown RBP3.2□□□□□ -1.9
Trim40-203ENSMUST00000172711 A030003K21RikA0A1Y7VIM3 128 aa3.2□□□□□ -1.9
Trim40-203ENSMUST00000172711 Krtap7-1Q9D3I6 87 aa3.19□□□□□ -1.9
Trim40-203ENSMUST00000172711 Gm11554B1AQB2 190 aa3.18□□□□□ -1.9
Trim40-203ENSMUST00000172711 Krtap5-2Q9D5Z7 189 aa3.17□□□□□ -1.9
Trim40-203ENSMUST00000172711 Sprr2a3Q4KL71 83 aa3.14□□□□□ -1.91
Trim40-203ENSMUST00000172711 Sprr2a1Q9CQK8 83 aa3.14□□□□□ -1.91
Trim40-203ENSMUST00000172711 Gpr98Q8VHN7 6298 aaKnown RBP3.1□□□□□ -1.91
Trim40-203ENSMUST00000172711 Kmt2dQ6PDK2 5588 aa3.1□□□□□ -1.91
Trim40-203ENSMUST00000172711 Gm6217A0A1Y7VJK9 128 aa3.09□□□□□ -1.92
Trim40-203ENSMUST00000172711 Muc19Q6PZE0 7524 aa3.08□□□□□ -1.92
Trim40-203ENSMUST00000172711 Gm4553A0A1B0GSA9 284 aa3.05□□□□□ -1.92
Trim40-203ENSMUST00000172711 Sprr2iO70560 76 aa3.05□□□□□ -1.92
Trim40-203ENSMUST00000172711 Gm11568A2A4M2 211 aa3.03□□□□□ -1.92
Trim40-203ENSMUST00000172711 Krtap9-1Q64526 186 aa3.03□□□□□ -1.92
Trim40-203ENSMUST00000172711 Syne1Q6ZWR6 8799 aa3.03□□□□□ -1.93
Trim40-203ENSMUST00000172711 Krtap19-9bQ99NG9 58 aa2.99□□□□□ -1.93
Trim40-203ENSMUST00000172711 Gm39115A0A1B0GSH7 232 aa2.94□□□□□ -1.94
Trim40-203ENSMUST00000172711 Gm17402F6Z0L5 76 aa2.91□□□□□ -1.94
Trim40-203ENSMUST00000172711 Gm29735A0A1B0GT06 219 aa2.9□□□□□ -1.95
Trim40-203ENSMUST00000172711 Gm45337A0A1B0GS71 263 aa2.89□□□□□ -1.95
Trim40-203ENSMUST00000172711 Hmcn1D3YXG0 5634 aa2.88□□□□□ -1.95
Trim40-203ENSMUST00000172711 Lce3bQ9CQM7 98 aa2.88□□□□□ -1.95
Trim40-203ENSMUST00000172711 NebE9Q1W3 7152 aa2.83□□□□□ -1.96
Trim40-203ENSMUST00000172711 DstQ91ZU6 7393 aaKnown RBP2.82□□□□□ -1.96
Trim40-203ENSMUST00000172711 Gm10153A0A1B0GRL1 320 aa2.79□□□□□ -1.96
Trim40-203ENSMUST00000172711 Gm45618A0A1B0GSA0 219 aa2.79□□□□□ -1.96
Trim40-203ENSMUST00000172711 4933428G20RikQ9D3X4 101 aa2.79□□□□□ -1.96
Trim40-203ENSMUST00000172711 Gm40460A0A1B0GR10 244 aa2.78□□□□□ -1.97
Trim40-203ENSMUST00000172711 Gm7579A0A1B0GRJ4 243 aa2.78□□□□□ -1.97
Trim40-203ENSMUST00000172711 Krtap5-5Q2TA51 241 aa2.78□□□□□ -1.97
Trim40-203ENSMUST00000172711 Krtap5-4Q62220 223 aa2.78□□□□□ -1.97
Trim40-203ENSMUST00000172711 Krtap19-4Q925H7 84 aa2.73□□□□□ -1.97
Trim40-203ENSMUST00000172711 Krtap4-16Q91W93 202 aa2.72□□□□□ -1.97
Trim40-203ENSMUST00000172711 Mt1P02802 61 aaKnown RBP2.68□□□□□ -1.98
Trim40-203ENSMUST00000172711 Gm11938Q9D3H4 131 aa2.66□□□□□ -1.98
Trim40-203ENSMUST00000172711 Tnp1P10856 55 aa2.64□□□□□ -1.99
Trim40-203ENSMUST00000172711 AhnakE9Q616 5656 aaKnown RBP2.6□□□□□ -1.99
Trim40-203ENSMUST00000172711 Sprr2fO70557 76 aa2.57□□□□□ -2
Trim40-203ENSMUST00000172711 Lce3cQ91V05 98 aa2.5□□□□□ -2.01
Trim40-203ENSMUST00000172711 ObscnA2AAJ9 8891 aaKnown RBP2.46□□□□□ -2.02
Trim40-203ENSMUST00000172711 Lce3dE9Q8V1 98 aa2.44□□□□□ -2.02
Trim40-203ENSMUST00000172711 Lce3aQ497I5 98 aa2.4□□□□□ -2.03
Trim40-203ENSMUST00000172711 Lce3eF8VQJ0 98 aa2.34□□□□□ -2.03
Trim40-203ENSMUST00000172711 Lce3fQ6PAI4 98 aa2.34□□□□□ -2.03
Trim40-203ENSMUST00000172711 Gm4559A4IF42 199 aa2.21□□□□□ -2.06
Trim40-203ENSMUST00000172711 Sprr2dO70555 85 aa2.18□□□□□ -2.06
Trim40-203ENSMUST00000172711 Sprr2eO70556 76 aa2.17□□□□□ -2.06
Trim40-203ENSMUST00000172711 Muc16A0A140LJ72 8478 aa2.15□□□□□ -2.06
Trim40-203ENSMUST00000172711 Gm10024A0A0A0MQA4 119 aa2.12□□□□□ -2.07
Trim40-203ENSMUST00000172711 Krtap5-1Q64507 230 aa2.11□□□□□ -2.07
Trim40-203ENSMUST00000172711 Gm10229O08631 77 aa2.09□□□□□ -2.07
Trim40-203ENSMUST00000172711 Sprr2hO70559 108 aa2.06□□□□□ -2.08
Trim40-203ENSMUST00000172711 1110025L11RikO09048 78 aa1.85□□□□□ -2.11
Trim40-203ENSMUST00000172711 Krtap6-5Q925H3 78 aa1.85□□□□□ -2.11
Trim40-203ENSMUST00000172711 Sprr2bO70554 98 aa1.6□□□□□ -2.15
Trim40-203ENSMUST00000172711 Krtap6-2O08884 159 aa1.53□□□□□ -2.16
Trim40-203ENSMUST00000172711 Krtap21-1Q925H4 128 aa1.49□□□□□ -2.17
Trim40-203ENSMUST00000172711 Phgr1Q8K0G7 91 aa1.19□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 76.8 ms