RNA–Protein interactions for RNA: ENSMUST00000118976.8

Ccdc9-202, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-202ENSMUST00000118976 Gm11596B1AQB0 205 aa7.87□□□□□ -1.15
Ccdc9-202ENSMUST00000118976 Sprr2fO70557 76 aa7.83□□□□□ -1.16
Ccdc9-202ENSMUST00000118976 Lce3eF8VQJ0 98 aa7.76□□□□□ -1.17
Ccdc9-202ENSMUST00000118976 Lce3fQ6PAI4 98 aa7.76□□□□□ -1.17
Ccdc9-202ENSMUST00000118976 Sprr2kO70562 68 aa7.74□□□□□ -1.17
Ccdc9-202ENSMUST00000118976 Syne1Q6ZWR6 8799 aa7.72□□□□□ -1.17
Ccdc9-202ENSMUST00000118976 Syne2Q6ZWQ0 6874 aaKnown RBP7.7□□□□□ -1.18
Ccdc9-202ENSMUST00000118976 Gm11564A2A4L9 201 aa7.7□□□□□ -1.18
Ccdc9-202ENSMUST00000118976 Gm11563B1AQ90 168 aa7.7□□□□□ -1.18
Ccdc9-202ENSMUST00000118976 Gm11595B1AQA7 289 aa7.7□□□□□ -1.18
Ccdc9-202ENSMUST00000118976 Krtap4-8B1AQA8 209 aa7.7□□□□□ -1.18
Ccdc9-202ENSMUST00000118976 2300003K06RikA2A4M0 262 aa7.67□□□□□ -1.18
Ccdc9-202ENSMUST00000118976 Lce3aQ497I5 98 aa7.63□□□□□ -1.19
Ccdc9-202ENSMUST00000118976 Krtap31-1Q9D644 177 aa7.58□□□□□ -1.2
Ccdc9-202ENSMUST00000118976 Mt4P47945 62 aa7.53□□□□□ -1.2
Ccdc9-202ENSMUST00000118976 Lce1bQ9D149 137 aa7.51□□□□□ -1.21
Ccdc9-202ENSMUST00000118976 Krtap4-9B1AQA9 244 aa7.5□□□□□ -1.21
Ccdc9-202ENSMUST00000118976 Gm38119A0A0A6YX29 146 aa7.35□□□□□ -1.23
Ccdc9-202ENSMUST00000118976 ObscnA2AAJ9 8891 aaKnown RBP7.34□□□□□ -1.23
Ccdc9-202ENSMUST00000118976 Krtap4-16Q91W93 202 aa7.22□□□□□ -1.25
Ccdc9-202ENSMUST00000118976 Krtap4-13Q9D7P3 165 aa7.21□□□□□ -1.26
Ccdc9-202ENSMUST00000118976 Fsip2A2ARZ3 6995 aa7.18□□□□□ -1.26
Ccdc9-202ENSMUST00000118976 Krtap4-7Q9D732 168 aa6.96□□□□□ -1.3
Ccdc9-202ENSMUST00000118976 Mt1P02802 61 aaKnown RBP6.95□□□□□ -1.3
Ccdc9-202ENSMUST00000118976 Krtap6-3A0A087WQL6 57 aa6.84□□□□□ -1.32
Ccdc9-202ENSMUST00000118976 Lce1kJ3QP15 125 aa6.79□□□□□ -1.32
Ccdc9-202ENSMUST00000118976 Lce1lQ9D1G7 135 aa6.79□□□□□ -1.32
Ccdc9-202ENSMUST00000118976 A0A1Y7VJH8 109 aa6.78□□□□□ -1.32
Ccdc9-202ENSMUST00000118976 Krtap5-2Q9D5Z7 189 aa6.62□□□□□ -1.35
Ccdc9-202ENSMUST00000118976 Krtap20-2E9Q0A8 60 aa6.6□□□□□ -1.35
Ccdc9-202ENSMUST00000118976 Gm11568A2A4M2 211 aa6.58□□□□□ -1.36
Ccdc9-202ENSMUST00000118976 Krtap9-1Q64526 186 aa6.58□□□□□ -1.36
Ccdc9-202ENSMUST00000118976 Gm10024A0A0A0MQA4 119 aa6.58□□□□□ -1.36
Ccdc9-202ENSMUST00000118976 Gm10153A0A1B0GRL1 320 aa6.24□□□□□ -1.41
Ccdc9-202ENSMUST00000118976 A0A1Y7VLE6 161 aa6.15□□□□□ -1.43
Ccdc9-202ENSMUST00000118976 Gm4553A0A1B0GSA9 284 aa6.14□□□□□ -1.43
Ccdc9-202ENSMUST00000118976 Gm11559Q9D3H7 191 aa6.11□□□□□ -1.43
Ccdc9-202ENSMUST00000118976 Gm45337A0A1B0GS71 263 aa6.07□□□□□ -1.44
Ccdc9-202ENSMUST00000118976 Mt3P28184 68 aa6.03□□□□□ -1.44
Ccdc9-202ENSMUST00000118976 Gm2431E9Q8S1 172 aa5.91□□□□□ -1.46
Ccdc9-202ENSMUST00000118976 Krtap31-2Q8CAY5 177 aa5.9□□□□□ -1.46
Ccdc9-202ENSMUST00000118976 Gm40460A0A1B0GR10 244 aa5.9□□□□□ -1.47
Ccdc9-202ENSMUST00000118976 Gm7579A0A1B0GRJ4 243 aa5.9□□□□□ -1.47
Ccdc9-202ENSMUST00000118976 Krtap5-5Q2TA51 241 aa5.9□□□□□ -1.47
Ccdc9-202ENSMUST00000118976 Krtap5-4Q62220 223 aa5.9□□□□□ -1.47
Ccdc9-202ENSMUST00000118976 Muc16A0A140LJ72 8478 aa5.87□□□□□ -1.47
Ccdc9-202ENSMUST00000118976 Gm11554B1AQB2 190 aa5.84□□□□□ -1.47
Ccdc9-202ENSMUST00000118976 Macf1Q9QXZ0 7354 aaKnown RBP5.83□□□□□ -1.48
Ccdc9-202ENSMUST00000118976 Hmcn1D3YXG0 5634 aa5.7□□□□□ -1.5
Ccdc9-202ENSMUST00000118976 A030005L19RikA0A1Y7VIU2 113 aa5.63□□□□□ -1.51
Ccdc9-202ENSMUST00000118976 Kmt2dQ6PDK2 5588 aa5.63□□□□□ -1.51
Ccdc9-202ENSMUST00000118976 Gm39115A0A1B0GSH7 232 aa5.51□□□□□ -1.53
Ccdc9-202ENSMUST00000118976 1110025L11RikO09048 78 aa5.45□□□□□ -1.54
Ccdc9-202ENSMUST00000118976 Krtap6-5Q925H3 78 aa5.45□□□□□ -1.54
Ccdc9-202ENSMUST00000118976 Eppk1Q8R0W0 6548 aa5.33□□□□□ -1.56
Ccdc9-202ENSMUST00000118976 Sprr2bO70554 98 aa5.26□□□□□ -1.57
Ccdc9-202ENSMUST00000118976 DstQ91ZU6 7393 aaKnown RBP5.1□□□□□ -1.59
Ccdc9-202ENSMUST00000118976 Gm11639A0A1D5RLM8 5808 aa5.08□□□□□ -1.6
Ccdc9-202ENSMUST00000118976 Gpr98Q8VHN7 6298 aaKnown RBP5.06□□□□□ -1.6
Ccdc9-202ENSMUST00000118976 Muc19Q6PZE0 7524 aa4.99□□□□□ -1.61
Ccdc9-202ENSMUST00000118976 AhnakE9Q616 5656 aaKnown RBP4.85□□□□□ -1.63
Ccdc9-202ENSMUST00000118976 Gm45618A0A1B0GSA0 219 aa4.84□□□□□ -1.64
Ccdc9-202ENSMUST00000118976 Gm10229O08631 77 aa4.79□□□□□ -1.64
Ccdc9-202ENSMUST00000118976 A0A1Y7VJ07 166 aa4.75□□□□□ -1.65
Ccdc9-202ENSMUST00000118976 Phgr1Q8K0G7 91 aa4.65□□□□□ -1.67
Ccdc9-202ENSMUST00000118976 A0A286YCP9 139 aa4.6□□□□□ -1.67
Ccdc9-202ENSMUST00000118976 NebE9Q1W3 7152 aa4.56□□□□□ -1.68
Ccdc9-202ENSMUST00000118976 Krtap21-1Q925H4 128 aa4.53□□□□□ -1.68
Ccdc9-202ENSMUST00000118976 Gm29735A0A1B0GT06 219 aa4.44□□□□□ -1.7
Ccdc9-202ENSMUST00000118976 Gm11567Q9D141 195 aa4.38□□□□□ -1.71
Ccdc9-202ENSMUST00000118976 Krtap6-2O08884 159 aa3.95□□□□□ -1.78
Ccdc9-202ENSMUST00000118976 Krtap28-10A0A1Y7VP58 119 aa2.93□□□□□ -1.94
Ccdc9-202ENSMUST00000118976 A030003K21RikA0A1Y7VIM3 128 aa2.84□□□□□ -1.96
Ccdc9-202ENSMUST00000118976 Krtap5-1Q64507 230 aa2.81□□□□□ -1.96
Ccdc9-202ENSMUST00000118976 Krtap28-13A0A087WQP5 138 aa2.69□□□□□ -1.98
Ccdc9-202ENSMUST00000118976 Gm4559A4IF42 199 aa2.54□□□□□ -2
Ccdc9-202ENSMUST00000118976 Gm6217A0A1Y7VJK9 128 aa2.13□□□□□ -2.07
Ccdc9-202ENSMUST00000118976 A030005K14RikA0A1Y7VNY1 122 aa1.95□□□□□ -2.1
Ccdc9-202ENSMUST00000118976 A030014E15RikA0A1Y7VJV2 120 aa1.75□□□□□ -2.13
Ccdc9-202ENSMUST00000118976 Gm7544A0A1Y7VJ58 118 aa1.49□□□□□ -2.17
Retrieved 80 of 22,080 RNA–protein pairs in 5.9 ms