RNA–Protein interactions for RNA: ENSMUST00000115318.3

Synpo-202, Transcript of Synaptopodin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Synpo, Length 4,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo-202ENSMUST00000115318 Krtap31-1Q9D644 177 aa3.57□□□□□ -1.84
Synpo-202ENSMUST00000115318 Krtap4-6Q3V4B7 195 aa3.56□□□□□ -1.84
Synpo-202ENSMUST00000115318 Krtap17-1A2A5X6 109 aa3.56□□□□□ -1.84
Synpo-202ENSMUST00000115318 Sprr2hO70559 108 aa3.52□□□□□ -1.85
Synpo-202ENSMUST00000115318 Rnf213E9Q555 5152 aaKnown RBP3.5□□□□□ -1.85
Synpo-202ENSMUST00000115318 Gm11562A0PK51 136 aa3.48□□□□□ -1.85
Synpo-202ENSMUST00000115318 Gm11938Q9D3H4 131 aa3.48□□□□□ -1.85
Synpo-202ENSMUST00000115318 Muc5bE9Q5I3 4800 aa3.45□□□□□ -1.86
Synpo-202ENSMUST00000115318 Krtap4-1Q3UUY3 169 aa3.43□□□□□ -1.86
Synpo-202ENSMUST00000115318 Gm11596B1AQB0 205 aa3.38□□□□□ -1.87
Synpo-202ENSMUST00000115318 Gm11564A2A4L9 201 aa3.37□□□□□ -1.87
Synpo-202ENSMUST00000115318 Gm11563B1AQ90 168 aa3.37□□□□□ -1.87
Synpo-202ENSMUST00000115318 Gm11595B1AQA7 289 aa3.37□□□□□ -1.87
Synpo-202ENSMUST00000115318 Krtap4-8B1AQA8 209 aa3.37□□□□□ -1.87
Synpo-202ENSMUST00000115318 Krtap4-9B1AQA9 244 aa3.36□□□□□ -1.87
Synpo-202ENSMUST00000115318 2300003K06RikA2A4M0 262 aa3.34□□□□□ -1.87
Synpo-202ENSMUST00000115318 Krtap4-7Q9D732 168 aa3.31□□□□□ -1.88
Synpo-202ENSMUST00000115318 Lce1kJ3QP15 125 aa3.27□□□□□ -1.89
Synpo-202ENSMUST00000115318 Krtap31-2Q8CAY5 177 aa3.27□□□□□ -1.89
Synpo-202ENSMUST00000115318 SspoQ8CG65 4998 aa3.26□□□□□ -1.89
Synpo-202ENSMUST00000115318 Mt3P28184 68 aa3.26□□□□□ -1.89
Synpo-202ENSMUST00000115318 Krtap4-13Q9D7P3 165 aa3.23□□□□□ -1.89
Synpo-202ENSMUST00000115318 Fsip2A2ARZ3 6995 aa3.21□□□□□ -1.9
Synpo-202ENSMUST00000115318 Muc16A0A140LJ72 8478 aa3.2□□□□□ -1.9
Synpo-202ENSMUST00000115318 Mt1P02802 61 aaKnown RBP3.15□□□□□ -1.9
Synpo-202ENSMUST00000115318 ObscnA2AAJ9 8891 aaKnown RBP3.12□□□□□ -1.91
Synpo-202ENSMUST00000115318 Syne2Q6ZWQ0 6874 aaKnown RBP3.09□□□□□ -1.91
Synpo-202ENSMUST00000115318 Krtap6-3A0A087WQL6 57 aa3.08□□□□□ -1.92
Synpo-202ENSMUST00000115318 Macf1Q9QXZ0 7354 aaKnown RBP3.07□□□□□ -1.92
Synpo-202ENSMUST00000115318 Lce1a1Q9CQH5 143 aa3.01□□□□□ -1.93
Synpo-202ENSMUST00000115318 Krtap4-16Q91W93 202 aa2.99□□□□□ -1.93
Synpo-202ENSMUST00000115318 Krtap20-2E9Q0A8 60 aa2.88□□□□□ -1.95
Synpo-202ENSMUST00000115318 Gm11554B1AQB2 190 aa2.87□□□□□ -1.95
Synpo-202ENSMUST00000115318 Sprr2bO70554 98 aa2.87□□□□□ -1.95
Synpo-202ENSMUST00000115318 DstQ91ZU6 7393 aaKnown RBP2.83□□□□□ -1.96
Synpo-202ENSMUST00000115318 Eppk1Q8R0W0 6548 aa2.79□□□□□ -1.96
Synpo-202ENSMUST00000115318 Gpr98Q8VHN7 6298 aaKnown RBP2.75□□□□□ -1.97
Synpo-202ENSMUST00000115318 Gm11555B1AQ89 175 aa2.75□□□□□ -1.97
Synpo-202ENSMUST00000115318 Kmt2dQ6PDK2 5588 aa2.74□□□□□ -1.97
Synpo-202ENSMUST00000115318 NebE9Q1W3 7152 aa2.71□□□□□ -1.98
Synpo-202ENSMUST00000115318 Muc19Q6PZE0 7524 aa2.58□□□□□ -2
Synpo-202ENSMUST00000115318 1110025L11RikO09048 78 aa2.52□□□□□ -2.01
Synpo-202ENSMUST00000115318 Krtap6-5Q925H3 78 aa2.52□□□□□ -2.01
Synpo-202ENSMUST00000115318 Gm11559Q9D3H7 191 aa2.38□□□□□ -2.03
Synpo-202ENSMUST00000115318 Gm11568A2A4M2 211 aa2.36□□□□□ -2.03
Synpo-202ENSMUST00000115318 Krtap9-1Q64526 186 aa2.36□□□□□ -2.03
Synpo-202ENSMUST00000115318 Gm11639A0A1D5RLM8 5808 aa2.36□□□□□ -2.03
Synpo-202ENSMUST00000115318 Gm10229O08631 77 aa2.36□□□□□ -2.03
Synpo-202ENSMUST00000115318 Krtap5-2Q9D5Z7 189 aa2.23□□□□□ -2.05
Synpo-202ENSMUST00000115318 Hmcn1D3YXG0 5634 aa2.14□□□□□ -2.07
Synpo-202ENSMUST00000115318 Phgr1Q8K0G7 91 aa2.14□□□□□ -2.07
Synpo-202ENSMUST00000115318 Gm4553A0A1B0GSA9 284 aa2.11□□□□□ -2.07
Synpo-202ENSMUST00000115318 Gm10153A0A1B0GRL1 320 aa2.03□□□□□ -2.08
Synpo-202ENSMUST00000115318 A0A1Y7VJH8 109 aa2.01□□□□□ -2.09
Synpo-202ENSMUST00000115318 A030005L19RikA0A1Y7VIU2 113 aa1.93□□□□□ -2.1
Synpo-202ENSMUST00000115318 Gm2431E9Q8S1 172 aa1.91□□□□□ -2.1
Synpo-202ENSMUST00000115318 Krtap6-2O08884 159 aa1.91□□□□□ -2.1
Synpo-202ENSMUST00000115318 AhnakE9Q616 5656 aaKnown RBP1.9□□□□□ -2.11
Synpo-202ENSMUST00000115318 Gm45337A0A1B0GS71 263 aa1.88□□□□□ -2.11
Synpo-202ENSMUST00000115318 Gm40460A0A1B0GR10 244 aa1.86□□□□□ -2.11
Synpo-202ENSMUST00000115318 Gm7579A0A1B0GRJ4 243 aa1.86□□□□□ -2.11
Synpo-202ENSMUST00000115318 Krtap5-5Q2TA51 241 aa1.86□□□□□ -2.11
Synpo-202ENSMUST00000115318 Krtap5-4Q62220 223 aa1.86□□□□□ -2.11
Synpo-202ENSMUST00000115318 A0A1Y7VLE6 161 aa1.85□□□□□ -2.11
Synpo-202ENSMUST00000115318 Krtap21-1Q925H4 128 aa1.81□□□□□ -2.12
Synpo-202ENSMUST00000115318 Gm39115A0A1B0GSH7 232 aa1.7□□□□□ -2.14
Synpo-202ENSMUST00000115318 Krtap28-10A0A1Y7VP58 119 aa1.62□□□□□ -2.15
Synpo-202ENSMUST00000115318 Gm7544A0A1Y7VJ58 118 aa1.57□□□□□ -2.16
Synpo-202ENSMUST00000115318 Gm11567Q9D141 195 aa1.56□□□□□ -2.16
Synpo-202ENSMUST00000115318 A0A1Y7VJ07 166 aa1.51□□□□□ -2.17
Synpo-202ENSMUST00000115318 A0A286YCP9 139 aa1.51□□□□□ -2.17
Synpo-202ENSMUST00000115318 A030005K14RikA0A1Y7VNY1 122 aa1.5□□□□□ -2.17
Synpo-202ENSMUST00000115318 Krtap28-13A0A087WQP5 138 aa1.48□□□□□ -2.17
Synpo-202ENSMUST00000115318 Gm45618A0A1B0GSA0 219 aa1.48□□□□□ -2.17
Synpo-202ENSMUST00000115318 Gm29735A0A1B0GT06 219 aa1.41□□□□□ -2.18
Synpo-202ENSMUST00000115318 A030003K21RikA0A1Y7VIM3 128 aa1.38□□□□□ -2.19
Synpo-202ENSMUST00000115318 Gm6217A0A1Y7VJK9 128 aa1.38□□□□□ -2.19
Synpo-202ENSMUST00000115318 A030014E15RikA0A1Y7VJV2 120 aa1.22□□□□□ -2.21
Synpo-202ENSMUST00000115318 Krtap5-1Q64507 230 aa0.99□□□□□ -2.25
Synpo-202ENSMUST00000115318 Gm4559A4IF42 199 aa0.77□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 90.4 ms