RNA–Protein interactions for RNA: ENSMUST00000113717.7

Sptan1-204, Transcript of Spectrin alpha chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptan1, Length 7,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1-204ENSMUST00000113717 Herc1E9PZP8 4859 aa2.98□□□□□ -1.93
Sptan1-204ENSMUST00000113717 Krtap4-7Q9D732 168 aa2.96□□□□□ -1.93
Sptan1-204ENSMUST00000113717 Mt3P28184 68 aa2.96□□□□□ -1.94
Sptan1-204ENSMUST00000113717 Krtap4-1Q3UUY3 169 aa2.96□□□□□ -1.94
Sptan1-204ENSMUST00000113717 Hmcn2A2AJ76 5100 aa2.96□□□□□ -1.94
Sptan1-204ENSMUST00000113717 Lce1kJ3QP15 125 aa2.95□□□□□ -1.94
Sptan1-204ENSMUST00000113717 Birc6O88738 4882 aa2.91□□□□□ -1.94
Sptan1-204ENSMUST00000113717 Krtap4-9B1AQA9 244 aa2.91□□□□□ -1.94
Sptan1-204ENSMUST00000113717 Ubr4A2AN08 5180 aa2.91□□□□□ -1.94
Sptan1-204ENSMUST00000113717 Gm11564A2A4L9 201 aa2.9□□□□□ -1.95
Sptan1-204ENSMUST00000113717 Gm11563B1AQ90 168 aa2.9□□□□□ -1.95
Sptan1-204ENSMUST00000113717 Gm11595B1AQA7 289 aa2.9□□□□□ -1.95
Sptan1-204ENSMUST00000113717 Krtap4-8B1AQA8 209 aa2.9□□□□□ -1.95
Sptan1-204ENSMUST00000113717 Gm11596B1AQB0 205 aa2.89□□□□□ -1.95
Sptan1-204ENSMUST00000113717 Syne2Q6ZWQ0 6874 aaKnown RBP2.87□□□□□ -1.95
Sptan1-204ENSMUST00000113717 Krtap17-1A2A5X6 109 aa2.85□□□□□ -1.95
Sptan1-204ENSMUST00000113717 Krtap4-13Q9D7P3 165 aa2.84□□□□□ -1.95
Sptan1-204ENSMUST00000113717 Fsip2A2ARZ3 6995 aa2.83□□□□□ -1.96
Sptan1-204ENSMUST00000113717 Abca13Q5SSE9 5034 aa2.79□□□□□ -1.96
Sptan1-204ENSMUST00000113717 Mt1P02802 61 aaKnown RBP2.77□□□□□ -1.97
Sptan1-204ENSMUST00000113717 Lce1a1Q9CQH5 143 aa2.77□□□□□ -1.97
Sptan1-204ENSMUST00000113717 Muc5bE9Q5I3 4800 aa2.73□□□□□ -1.97
Sptan1-204ENSMUST00000113717 Sprr2bO70554 98 aa2.72□□□□□ -1.97
Sptan1-204ENSMUST00000113717 ObscnA2AAJ9 8891 aaKnown RBP2.7□□□□□ -1.98
Sptan1-204ENSMUST00000113717 Muc16A0A140LJ72 8478 aa2.68□□□□□ -1.98
Sptan1-204ENSMUST00000113717 Fat4Q2PZL6 4981 aa2.66□□□□□ -1.98
Sptan1-204ENSMUST00000113717 4932415D10RikA0A1W2P6U8 4986 aa2.66□□□□□ -1.98
Sptan1-204ENSMUST00000113717 Gm11554B1AQB2 190 aa2.58□□□□□ -2
Sptan1-204ENSMUST00000113717 Krtap6-3A0A087WQL6 57 aa2.55□□□□□ -2
Sptan1-204ENSMUST00000113717 Rnf213E9Q555 5152 aaKnown RBP2.52□□□□□ -2.01
Sptan1-204ENSMUST00000113717 Krtap20-2E9Q0A8 60 aa2.48□□□□□ -2.01
Sptan1-204ENSMUST00000113717 SspoQ8CG65 4998 aa2.46□□□□□ -2.02
Sptan1-204ENSMUST00000113717 Ush2AQ2QI47 5193 aa2.4□□□□□ -2.03
Sptan1-204ENSMUST00000113717 1110025L11RikO09048 78 aa2.27□□□□□ -2.05
Sptan1-204ENSMUST00000113717 Krtap6-5Q925H3 78 aa2.27□□□□□ -2.05
Sptan1-204ENSMUST00000113717 Macf1Q9QXZ0 7354 aaKnown RBP2.21□□□□□ -2.06
Sptan1-204ENSMUST00000113717 Gm10229O08631 77 aa2.16□□□□□ -2.06
Sptan1-204ENSMUST00000113717 Muc19Q6PZE0 7524 aa2.16□□□□□ -2.06
Sptan1-204ENSMUST00000113717 DstQ91ZU6 7393 aaKnown RBP2.15□□□□□ -2.06
Sptan1-204ENSMUST00000113717 Phgr1Q8K0G7 91 aa2.11□□□□□ -2.07
Sptan1-204ENSMUST00000113717 NebE9Q1W3 7152 aa2.1□□□□□ -2.07
Sptan1-204ENSMUST00000113717 Eppk1Q8R0W0 6548 aa2.06□□□□□ -2.08
Sptan1-204ENSMUST00000113717 Gm11555B1AQ89 175 aa2.06□□□□□ -2.08
Sptan1-204ENSMUST00000113717 Kmt2dQ6PDK2 5588 aa2.01□□□□□ -2.09
Sptan1-204ENSMUST00000113717 Gm11568A2A4M2 211 aa1.94□□□□□ -2.1
Sptan1-204ENSMUST00000113717 Krtap9-1Q64526 186 aa1.94□□□□□ -2.1
Sptan1-204ENSMUST00000113717 Gm11559Q9D3H7 191 aa1.92□□□□□ -2.1
Sptan1-204ENSMUST00000113717 Krtap6-2O08884 159 aa1.71□□□□□ -2.14
Sptan1-204ENSMUST00000113717 Krtap5-2Q9D5Z7 189 aa1.67□□□□□ -2.14
Sptan1-204ENSMUST00000113717 Gm11567Q9D141 195 aa1.67□□□□□ -2.14
Sptan1-204ENSMUST00000113717 Krtap21-1Q925H4 128 aa1.58□□□□□ -2.16
Sptan1-204ENSMUST00000113717 Hmcn1D3YXG0 5634 aa1.57□□□□□ -2.16
Sptan1-204ENSMUST00000113717 Gm11639A0A1D5RLM8 5808 aa1.57□□□□□ -2.16
Sptan1-204ENSMUST00000113717 Gm4553A0A1B0GSA9 284 aa1.55□□□□□ -2.16
Sptan1-204ENSMUST00000113717 Gpr98Q8VHN7 6298 aaKnown RBP1.45□□□□□ -2.18
Sptan1-204ENSMUST00000113717 Gm10153A0A1B0GRL1 320 aa1.42□□□□□ -2.18
Sptan1-204ENSMUST00000113717 Gm2431E9Q8S1 172 aa1.41□□□□□ -2.18
Sptan1-204ENSMUST00000113717 A030005L19RikA0A1Y7VIU2 113 aa1.34□□□□□ -2.19
Sptan1-204ENSMUST00000113717 Gm45337A0A1B0GS71 263 aa1.3□□□□□ -2.2
Sptan1-204ENSMUST00000113717 Gm40460A0A1B0GR10 244 aa1.27□□□□□ -2.21
Sptan1-204ENSMUST00000113717 Gm7579A0A1B0GRJ4 243 aa1.27□□□□□ -2.21
Sptan1-204ENSMUST00000113717 Krtap5-5Q2TA51 241 aa1.27□□□□□ -2.21
Sptan1-204ENSMUST00000113717 Krtap5-4Q62220 223 aa1.27□□□□□ -2.21
Sptan1-204ENSMUST00000113717 AhnakE9Q616 5656 aaKnown RBP1.27□□□□□ -2.21
Sptan1-204ENSMUST00000113717 A0A1Y7VLE6 161 aa1.22□□□□□ -2.21
Sptan1-204ENSMUST00000113717 Gm39115A0A1B0GSH7 232 aa1.2□□□□□ -2.22
Sptan1-204ENSMUST00000113717 A030003K21RikA0A1Y7VIM3 128 aa1.12□□□□□ -2.23
Sptan1-204ENSMUST00000113717 A0A1Y7VJH8 109 aa1.05□□□□□ -2.24
Sptan1-204ENSMUST00000113717 Gm6217A0A1Y7VJK9 128 aa1.05□□□□□ -2.24
Sptan1-204ENSMUST00000113717 Krtap28-10A0A1Y7VP58 119 aa1.04□□□□□ -2.24
Sptan1-204ENSMUST00000113717 Krtap28-13A0A087WQP5 138 aa1□□□□□ -2.25
Sptan1-204ENSMUST00000113717 A030005K14RikA0A1Y7VNY1 122 aa1□□□□□ -2.25
Sptan1-204ENSMUST00000113717 Gm7544A0A1Y7VJ58 118 aa0.99□□□□□ -2.25
Sptan1-204ENSMUST00000113717 Gm29735A0A1B0GT06 219 aa0.98□□□□□ -2.25
Sptan1-204ENSMUST00000113717 A0A1Y7VJ07 166 aa0.98□□□□□ -2.25
Sptan1-204ENSMUST00000113717 A0A286YCP9 139 aa0.94□□□□□ -2.26
Sptan1-204ENSMUST00000113717 Gm45618A0A1B0GSA0 219 aa0.92□□□□□ -2.26
Sptan1-204ENSMUST00000113717 A030014E15RikA0A1Y7VJV2 120 aa0.9□□□□□ -2.26
Sptan1-204ENSMUST00000113717 Krtap5-1Q64507 230 aa0.8□□□□□ -2.28
Sptan1-204ENSMUST00000113717 Gm4559A4IF42 199 aa0.49□□□□□ -2.33
Retrieved 80 of 22,080 RNA–protein pairs in 99.9 ms