RNA–Protein interactions for RNA: ENSMUST00000113701.7

Tpm1-214, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,677 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-214ENSMUST00000113701 A030014E15RikA0A1Y7VJV2 120 aa5.82□□□□□ -1.48
Tpm1-214ENSMUST00000113701 Gm10100J3QK64 120 aa5.75□□□□□ -1.49
Tpm1-214ENSMUST00000113701 Krtap4-13Q9D7P3 165 aa5.75□□□□□ -1.49
Tpm1-214ENSMUST00000113701 A0A286YCP9 139 aa5.72□□□□□ -1.49
Tpm1-214ENSMUST00000113701 Gm6217A0A1Y7VJK9 128 aa5.69□□□□□ -1.5
Tpm1-214ENSMUST00000113701 Krtap6-3A0A087WQL6 57 aa5.63□□□□□ -1.51
Tpm1-214ENSMUST00000113701 Sprr2kO70562 68 aa5.61□□□□□ -1.51
Tpm1-214ENSMUST00000113701 Gm40193A0A1B0GT39 78 aa5.59□□□□□ -1.51
Tpm1-214ENSMUST00000113701 2300003K06RikA2A4M0 262 aa5.55□□□□□ -1.52
Tpm1-214ENSMUST00000113701 Gm20538F6Z9R1 75 aa5.55□□□□□ -1.52
Tpm1-214ENSMUST00000113701 Krtap7-1Q9D3I6 87 aa5.55□□□□□ -1.52
Tpm1-214ENSMUST00000113701 Tnp1P10856 55 aa5.48□□□□□ -1.53
Tpm1-214ENSMUST00000113701 2310046K23RikA0A0A6YVW6 87 aa5.24□□□□□ -1.57
Tpm1-214ENSMUST00000113701 Gm10142J3KMP7 120 aa5.22□□□□□ -1.57
Tpm1-214ENSMUST00000113701 Sprr2gO70558 76 aa5.21□□□□□ -1.58
Tpm1-214ENSMUST00000113701 Gm10272F7CZ33 110 aa5.19□□□□□ -1.58
Tpm1-214ENSMUST00000113701 Mp68P56379 58 aa5.17□□□□□ -1.58
Tpm1-214ENSMUST00000113701 Krtap20-2E9Q0A8 60 aa5.12□□□□□ -1.59
Tpm1-214ENSMUST00000113701 Lce1dQ9D731 133 aa5.11□□□□□ -1.59
Tpm1-214ENSMUST00000113701 Lce3bQ9CQM7 98 aa5.05□□□□□ -1.6
Tpm1-214ENSMUST00000113701 Gm11938Q9D3H4 131 aa5.03□□□□□ -1.6
Tpm1-214ENSMUST00000113701 Krtap5-2Q9D5Z7 189 aa5.01□□□□□ -1.61
Tpm1-214ENSMUST00000113701 Sprr2iO70560 76 aa4.96□□□□□ -1.61
Tpm1-214ENSMUST00000113701 Syne1Q6ZWR6 8799 aa4.96□□□□□ -1.62
Tpm1-214ENSMUST00000113701 Lce1kJ3QP15 125 aa4.93□□□□□ -1.62
Tpm1-214ENSMUST00000113701 Mt3P28184 68 aa4.88□□□□□ -1.63
Tpm1-214ENSMUST00000113701 Gm11568A2A4M2 211 aa4.83□□□□□ -1.64
Tpm1-214ENSMUST00000113701 Krtap9-1Q64526 186 aa4.83□□□□□ -1.64
Tpm1-214ENSMUST00000113701 Sprr2dO70555 85 aa4.76□□□□□ -1.65
Tpm1-214ENSMUST00000113701 Lce1fB9EJP6 147 aa4.74□□□□□ -1.65
Tpm1-214ENSMUST00000113701 Lce1cQ9D1C5 147 aa4.74□□□□□ -1.65
Tpm1-214ENSMUST00000113701 Gm11554B1AQB2 190 aa4.73□□□□□ -1.65
Tpm1-214ENSMUST00000113701 Gm4553A0A1B0GSA9 284 aa4.72□□□□□ -1.65
Tpm1-214ENSMUST00000113701 Mt1P02802 61 aaKnown RBP4.7□□□□□ -1.66
Tpm1-214ENSMUST00000113701 Gm9112A2AI92 75 aa4.67□□□□□ -1.66
Tpm1-214ENSMUST00000113701 Eppk1Q8R0W0 6548 aa4.67□□□□□ -1.66
Tpm1-214ENSMUST00000113701 Ndufaf8A2AMZ4 74 aa4.67□□□□□ -1.66
Tpm1-214ENSMUST00000113701 Krtap19-4Q925H7 84 aa4.67□□□□□ -1.66
Tpm1-214ENSMUST00000113701 Macf1Q9QXZ0 7354 aaKnown RBP4.66□□□□□ -1.66
Tpm1-214ENSMUST00000113701 Lce3cQ91V05 98 aa4.64□□□□□ -1.67
Tpm1-214ENSMUST00000113701 Gm45337A0A1B0GS71 263 aa4.61□□□□□ -1.67
Tpm1-214ENSMUST00000113701 Gm10153A0A1B0GRL1 320 aa4.6□□□□□ -1.67
Tpm1-214ENSMUST00000113701 Lce3dE9Q8V1 98 aa4.59□□□□□ -1.67
Tpm1-214ENSMUST00000113701 Kmt2dQ6PDK2 5588 aa4.57□□□□□ -1.68
Tpm1-214ENSMUST00000113701 Gm2431E9Q8S1 172 aa4.54□□□□□ -1.68
Tpm1-214ENSMUST00000113701 Lce3eF8VQJ0 98 aa4.51□□□□□ -1.69
Tpm1-214ENSMUST00000113701 Lce3fQ6PAI4 98 aa4.51□□□□□ -1.69
Tpm1-214ENSMUST00000113701 Gm40460A0A1B0GR10 244 aa4.47□□□□□ -1.69
Tpm1-214ENSMUST00000113701 Gm7579A0A1B0GRJ4 243 aa4.47□□□□□ -1.69
Tpm1-214ENSMUST00000113701 Krtap5-5Q2TA51 241 aa4.47□□□□□ -1.69
Tpm1-214ENSMUST00000113701 Krtap5-4Q62220 223 aa4.47□□□□□ -1.69
Tpm1-214ENSMUST00000113701 Gm11639A0A1D5RLM8 5808 aa4.42□□□□□ -1.7
Tpm1-214ENSMUST00000113701 ObscnA2AAJ9 8891 aaKnown RBP4.41□□□□□ -1.7
Tpm1-214ENSMUST00000113701 4933428G20RikQ9D3X4 101 aa4.38□□□□□ -1.71
Tpm1-214ENSMUST00000113701 Hmcn1D3YXG0 5634 aa4.35□□□□□ -1.71
Tpm1-214ENSMUST00000113701 Lce3aQ497I5 98 aa4.32□□□□□ -1.72
Tpm1-214ENSMUST00000113701 Muc19Q6PZE0 7524 aa4.29□□□□□ -1.72
Tpm1-214ENSMUST00000113701 Gm39115A0A1B0GSH7 232 aa4.29□□□□□ -1.72
Tpm1-214ENSMUST00000113701 DstQ91ZU6 7393 aaKnown RBP4.16□□□□□ -1.74
Tpm1-214ENSMUST00000113701 Gpr98Q8VHN7 6298 aaKnown RBP4.12□□□□□ -1.75
Tpm1-214ENSMUST00000113701 Gm45618A0A1B0GSA0 219 aa4.11□□□□□ -1.75
Tpm1-214ENSMUST00000113701 Sprr2hO70559 108 aa4.09□□□□□ -1.76
Tpm1-214ENSMUST00000113701 NebE9Q1W3 7152 aa3.97□□□□□ -1.77
Tpm1-214ENSMUST00000113701 Krtap4-16Q91W93 202 aa3.96□□□□□ -1.78
Tpm1-214ENSMUST00000113701 Sprr2fO70557 76 aa3.94□□□□□ -1.78
Tpm1-214ENSMUST00000113701 AhnakE9Q616 5656 aaKnown RBP3.88□□□□□ -1.79
Tpm1-214ENSMUST00000113701 Gm10024A0A0A0MQA4 119 aa3.78□□□□□ -1.81
Tpm1-214ENSMUST00000113701 Sprr2eO70556 76 aa3.77□□□□□ -1.81
Tpm1-214ENSMUST00000113701 Gm29735A0A1B0GT06 219 aa3.71□□□□□ -1.81
Tpm1-214ENSMUST00000113701 Gm11567Q9D141 195 aa3.66□□□□□ -1.82
Tpm1-214ENSMUST00000113701 1110025L11RikO09048 78 aa3.48□□□□□ -1.85
Tpm1-214ENSMUST00000113701 Krtap6-5Q925H3 78 aa3.48□□□□□ -1.85
Tpm1-214ENSMUST00000113701 Muc16A0A140LJ72 8478 aa3.27□□□□□ -1.89
Tpm1-214ENSMUST00000113701 Gm10229O08631 77 aa3.1□□□□□ -1.91
Tpm1-214ENSMUST00000113701 Sprr2bO70554 98 aa2.95□□□□□ -1.94
Tpm1-214ENSMUST00000113701 Krtap5-1Q64507 230 aa2.88□□□□□ -1.95
Tpm1-214ENSMUST00000113701 Krtap21-1Q925H4 128 aa2.83□□□□□ -1.96
Tpm1-214ENSMUST00000113701 Gm4559A4IF42 199 aa2.77□□□□□ -1.97
Tpm1-214ENSMUST00000113701 Krtap6-2O08884 159 aa2.7□□□□□ -1.98
Tpm1-214ENSMUST00000113701 Phgr1Q8K0G7 91 aa2.44□□□□□ -2.02
Retrieved 80 of 22,080 RNA–protein pairs in 171.7 ms