RNA–Protein interactions for RNA: ENSMUST00000113697.7

Tpm1-213, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 2 BASIC

Gene Tpm1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-213ENSMUST00000113697 Lce1kJ3QP15 125 aa4.25□□□□□ -1.73
Tpm1-213ENSMUST00000113697 Gm6358A0A087WPH4 74 aa4.21□□□□□ -1.73
Tpm1-213ENSMUST00000113697 Lce1iQ9D6P5 149 aa4.19□□□□□ -1.74
Tpm1-213ENSMUST00000113697 Mdn1A2ANY6 5589 aaKnown RBP4.18□□□□□ -1.74
Tpm1-213ENSMUST00000113697 Krtap9-1Q64526 186 aa4.18□□□□□ -1.74
Tpm1-213ENSMUST00000113697 Lce1a2Q9D1K4 149 aa4.12□□□□□ -1.75
Tpm1-213ENSMUST00000113697 Gm11564A2A4L9 201 aa4.12□□□□□ -1.75
Tpm1-213ENSMUST00000113697 Gm11595B1AQA7 289 aa4.12□□□□□ -1.75
Tpm1-213ENSMUST00000113697 Krtap4-8B1AQA8 209 aa4.12□□□□□ -1.75
Tpm1-213ENSMUST00000113697 Tnp1P10856 55 aa4.07□□□□□ -1.76
Tpm1-213ENSMUST00000113697 Mt2P02798 61 aa4.04□□□□□ -1.76
Tpm1-213ENSMUST00000113697 Krtap4-9B1AQA9 244 aa3.99□□□□□ -1.77
Tpm1-213ENSMUST00000113697 Krtap8-1O08633 61 aa3.99□□□□□ -1.77
Tpm1-213ENSMUST00000113697 Gm45618A0A1B0GSA0 219 aa3.96□□□□□ -1.78
Tpm1-213ENSMUST00000113697 Krtap19-9bQ99NG9 58 aa3.95□□□□□ -1.78
Tpm1-213ENSMUST00000113697 Fsip2A2ARZ3 6995 aa3.95□□□□□ -1.78
Tpm1-213ENSMUST00000113697 Mt4P47945 62 aa3.92□□□□□ -1.78
Tpm1-213ENSMUST00000113697 Krtap4-13Q9D7P3 165 aa3.86□□□□□ -1.79
Tpm1-213ENSMUST00000113697 Krtap9-3Q3V2C1 136 aa3.85□□□□□ -1.79
Tpm1-213ENSMUST00000113697 Krtap22-2J3QNX6 67 aa3.84□□□□□ -1.8
Tpm1-213ENSMUST00000113697 2310046K23RikA0A0A6YVW6 87 aa3.83□□□□□ -1.8
Tpm1-213ENSMUST00000113697 Krtap6-3A0A087WQL6 57 aa3.82□□□□□ -1.8
Tpm1-213ENSMUST00000113697 Lce1fB9EJP6 147 aa3.81□□□□□ -1.8
Tpm1-213ENSMUST00000113697 Lce1cQ9D1C5 147 aa3.78□□□□□ -1.8
Tpm1-213ENSMUST00000113697 Sprr2kO70562 68 aa3.75□□□□□ -1.81
Tpm1-213ENSMUST00000113697 Gm39115A0A1B0GSH7 232 aa3.65□□□□□ -1.82
Tpm1-213ENSMUST00000113697 4933428G20RikQ9D3X4 101 aa3.65□□□□□ -1.82
Tpm1-213ENSMUST00000113697 Gm11568A2A4M2 211 aa3.61□□□□□ -1.83
Tpm1-213ENSMUST00000113697 Gm11554B1AQB2 190 aa3.54□□□□□ -1.84
Tpm1-213ENSMUST00000113697 Sprr2gO70558 76 aa3.5□□□□□ -1.85
Tpm1-213ENSMUST00000113697 Krtap20-2E9Q0A8 60 aa3.47□□□□□ -1.85
Tpm1-213ENSMUST00000113697 Gm29735A0A1B0GT06 219 aa3.46□□□□□ -1.86
Tpm1-213ENSMUST00000113697 Gm11567Q9D141 195 aa3.39□□□□□ -1.87
Tpm1-213ENSMUST00000113697 Sprr2dO70555 85 aa3.36□□□□□ -1.87
Tpm1-213ENSMUST00000113697 Gm2431E9Q8S1 172 aa3.36□□□□□ -1.87
Tpm1-213ENSMUST00000113697 Eppk1Q8R0W0 6548 aa3.32□□□□□ -1.88
Tpm1-213ENSMUST00000113697 Lce3bQ9CQM7 98 aa3.32□□□□□ -1.88
Tpm1-213ENSMUST00000113697 Syne1Q6ZWR6 8799 aa3.32□□□□□ -1.88
Tpm1-213ENSMUST00000113697 Gm11938Q9D3H4 131 aa3.31□□□□□ -1.88
Tpm1-213ENSMUST00000113697 Sprr2iO70560 76 aa3.3□□□□□ -1.88
Tpm1-213ENSMUST00000113697 Krtap5-2Q9D5Z7 189 aa3.24□□□□□ -1.89
Tpm1-213ENSMUST00000113697 Krtap19-4Q925H7 84 aa3.21□□□□□ -1.9
Tpm1-213ENSMUST00000113697 Macf1Q9QXZ0 7354 aaKnown RBP3.13□□□□□ -1.91
Tpm1-213ENSMUST00000113697 Gm11639A0A1D5RLM8 5808 aa3.09□□□□□ -1.92
Tpm1-213ENSMUST00000113697 Gm4553A0A1B0GSA9 284 aa3.06□□□□□ -1.92
Tpm1-213ENSMUST00000113697 Kmt2dQ6PDK2 5588 aa3.06□□□□□ -1.92
Tpm1-213ENSMUST00000113697 Gm45337A0A1B0GS71 263 aa3.05□□□□□ -1.92
Tpm1-213ENSMUST00000113697 Mt1P02802 61 aaKnown RBP3.05□□□□□ -1.92
Tpm1-213ENSMUST00000113697 Lce3cQ91V05 98 aa3.03□□□□□ -1.92
Tpm1-213ENSMUST00000113697 Gpr98Q8VHN7 6298 aaKnown RBP2.98□□□□□ -1.93
Tpm1-213ENSMUST00000113697 Lce3dE9Q8V1 98 aa2.98□□□□□ -1.93
Tpm1-213ENSMUST00000113697 Muc19Q6PZE0 7524 aa2.98□□□□□ -1.93
Tpm1-213ENSMUST00000113697 Krtap5-4Q62220 223 aa2.97□□□□□ -1.93
Tpm1-213ENSMUST00000113697 Gm10153A0A1B0GRL1 320 aa2.96□□□□□ -1.93
Tpm1-213ENSMUST00000113697 Lce3aQ497I5 98 aa2.96□□□□□ -1.94
Tpm1-213ENSMUST00000113697 Lce3eF8VQJ0 98 aa2.94□□□□□ -1.94
Tpm1-213ENSMUST00000113697 Lce3fQ6PAI4 98 aa2.94□□□□□ -1.94
Tpm1-213ENSMUST00000113697 Sprr2hO70559 108 aa2.9□□□□□ -1.95
Tpm1-213ENSMUST00000113697 ObscnA2AAJ9 8891 aaKnown RBP2.89□□□□□ -1.95
Tpm1-213ENSMUST00000113697 Gm40460A0A1B0GR10 244 aa2.87□□□□□ -1.95
Tpm1-213ENSMUST00000113697 Gm7579A0A1B0GRJ4 243 aa2.87□□□□□ -1.95
Tpm1-213ENSMUST00000113697 Krtap5-5Q2TA51 241 aa2.87□□□□□ -1.95
Tpm1-213ENSMUST00000113697 Hmcn1D3YXG0 5634 aa2.87□□□□□ -1.95
Tpm1-213ENSMUST00000113697 Sprr2eO70556 76 aa2.85□□□□□ -1.95
Tpm1-213ENSMUST00000113697 DstQ91ZU6 7393 aaKnown RBP2.81□□□□□ -1.96
Tpm1-213ENSMUST00000113697 Gm10024A0A0A0MQA4 119 aa2.79□□□□□ -1.96
Tpm1-213ENSMUST00000113697 NebE9Q1W3 7152 aa2.76□□□□□ -1.97
Tpm1-213ENSMUST00000113697 Sprr2fO70557 76 aa2.74□□□□□ -1.97
Tpm1-213ENSMUST00000113697 Krtap4-16Q91W93 202 aa2.72□□□□□ -1.97
Tpm1-213ENSMUST00000113697 Krtap5-1Q64507 230 aa2.69□□□□□ -1.98
Tpm1-213ENSMUST00000113697 Gm4559A4IF42 199 aa2.62□□□□□ -1.99
Tpm1-213ENSMUST00000113697 Gm10229O08631 77 aa2.6□□□□□ -1.99
Tpm1-213ENSMUST00000113697 AhnakE9Q616 5656 aaKnown RBP2.55□□□□□ -2
Tpm1-213ENSMUST00000113697 1110025L11RikO09048 78 aa2.24□□□□□ -2.05
Tpm1-213ENSMUST00000113697 Krtap6-5Q925H3 78 aa2.24□□□□□ -2.05
Tpm1-213ENSMUST00000113697 Muc16A0A140LJ72 8478 aa2.18□□□□□ -2.06
Tpm1-213ENSMUST00000113697 Sprr2bO70554 98 aa2.12□□□□□ -2.07
Tpm1-213ENSMUST00000113697 Krtap21-1Q925H4 128 aa1.85□□□□□ -2.11
Tpm1-213ENSMUST00000113697 Krtap6-2O08884 159 aa1.74□□□□□ -2.13
Tpm1-213ENSMUST00000113697 Phgr1Q8K0G7 91 aa1.71□□□□□ -2.13
Retrieved 80 of 22,080 RNA–protein pairs in 178.2 ms