RNA–Protein interactions for RNA: ENSMUST00000113685.9

Tpm1-205, Transcript of Tropomyosin alpha-1 chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Tpm1, Length 1,208 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-205ENSMUST00000113685 Krtap8-1O08633 61 aa4.3□□□□□ -1.72
Tpm1-205ENSMUST00000113685 Krtap9-3Q3V2C1 136 aa4.24□□□□□ -1.73
Tpm1-205ENSMUST00000113685 Krtap4-13Q9D7P3 165 aa4.24□□□□□ -1.73
Tpm1-205ENSMUST00000113685 H2al1mQ9DAD9 105 aa4.24□□□□□ -1.73
Tpm1-205ENSMUST00000113685 Camk2n1Q6QWF9 78 aa4.23□□□□□ -1.73
Tpm1-205ENSMUST00000113685 Fsip2A2ARZ3 6995 aa4.19□□□□□ -1.74
Tpm1-205ENSMUST00000113685 Krtap22-2J3QNX6 67 aa4.17□□□□□ -1.74
Tpm1-205ENSMUST00000113685 Sprr2kO70562 68 aa4.17□□□□□ -1.74
Tpm1-205ENSMUST00000113685 Gm3880A0A1B0GSB3 72 aa4.16□□□□□ -1.74
Tpm1-205ENSMUST00000113685 Krtap6-3A0A087WQL6 57 aa4.15□□□□□ -1.75
Tpm1-205ENSMUST00000113685 Krtap19-9bQ99NG9 58 aa4.15□□□□□ -1.75
Tpm1-205ENSMUST00000113685 Ndufs5Q99LY9 106 aa4.14□□□□□ -1.75
Tpm1-205ENSMUST00000113685 4933415A04RikQ9D443 101 aa4.13□□□□□ -1.75
Tpm1-205ENSMUST00000113685 Gm12216A0A1W2P827 62 aa4.11□□□□□ -1.75
Tpm1-205ENSMUST00000113685 Gm10153A0A1B0GRL1 320 aa4.08□□□□□ -1.76
Tpm1-205ENSMUST00000113685 2300003K06RikA2A4M0 262 aa4.07□□□□□ -1.76
Tpm1-205ENSMUST00000113685 Romo1P60603 79 aa3.99□□□□□ -1.77
Tpm1-205ENSMUST00000113685 Gm3646F6S692 53 aa3.96□□□□□ -1.78
Tpm1-205ENSMUST00000113685 Gm10337F7DEP7 55 aa3.96□□□□□ -1.78
Tpm1-205ENSMUST00000113685 Sprr2gO70558 76 aa3.92□□□□□ -1.78
Tpm1-205ENSMUST00000113685 Krtap5-4Q62220 223 aa3.91□□□□□ -1.78
Tpm1-205ENSMUST00000113685 Gm45337A0A1B0GS71 263 aa3.88□□□□□ -1.79
Tpm1-205ENSMUST00000113685 2310046K23RikA0A0A6YVW6 87 aa3.81□□□□□ -1.8
Tpm1-205ENSMUST00000113685 Krtap20-2E9Q0A8 60 aa3.8□□□□□ -1.8
Tpm1-205ENSMUST00000113685 Krtap7-1Q9D3I6 87 aa3.75□□□□□ -1.81
Tpm1-205ENSMUST00000113685 Tnp1P10856 55 aa3.73□□□□□ -1.81
Tpm1-205ENSMUST00000113685 Gm40193A0A1B0GT39 78 aa3.72□□□□□ -1.81
Tpm1-205ENSMUST00000113685 Gm10142J3KMP7 120 aa3.66□□□□□ -1.82
Tpm1-205ENSMUST00000113685 Sprr2iO70560 76 aa3.61□□□□□ -1.83
Tpm1-205ENSMUST00000113685 Lce3bQ9CQM7 98 aa3.59□□□□□ -1.83
Tpm1-205ENSMUST00000113685 Gm10272F7CZ33 110 aa3.58□□□□□ -1.84
Tpm1-205ENSMUST00000113685 Krtap5-2Q9D5Z7 189 aa3.57□□□□□ -1.84
Tpm1-205ENSMUST00000113685 Eppk1Q8R0W0 6548 aa3.51□□□□□ -1.85
Tpm1-205ENSMUST00000113685 Mt3P28184 68 aa3.48□□□□□ -1.85
Tpm1-205ENSMUST00000113685 Syne1Q6ZWR6 8799 aa3.43□□□□□ -1.86
Tpm1-205ENSMUST00000113685 Gm11568A2A4M2 211 aa3.42□□□□□ -1.86
Tpm1-205ENSMUST00000113685 Krtap9-1Q64526 186 aa3.42□□□□□ -1.86
Tpm1-205ENSMUST00000113685 Gm11938Q9D3H4 131 aa3.42□□□□□ -1.86
Tpm1-205ENSMUST00000113685 Gm4553A0A1B0GSA9 284 aa3.39□□□□□ -1.87
Tpm1-205ENSMUST00000113685 Mp68P56379 58 aa3.38□□□□□ -1.87
Tpm1-205ENSMUST00000113685 Macf1Q9QXZ0 7354 aaKnown RBP3.31□□□□□ -1.88
Tpm1-205ENSMUST00000113685 Mt1P02802 61 aaKnown RBP3.29□□□□□ -1.88
Tpm1-205ENSMUST00000113685 Gm11639A0A1D5RLM8 5808 aa3.29□□□□□ -1.88
Tpm1-205ENSMUST00000113685 Lce3cQ91V05 98 aa3.27□□□□□ -1.89
Tpm1-205ENSMUST00000113685 Kmt2dQ6PDK2 5588 aa3.27□□□□□ -1.89
Tpm1-205ENSMUST00000113685 Gm20538F6Z9R1 75 aa3.24□□□□□ -1.89
Tpm1-205ENSMUST00000113685 Krtap19-4Q925H7 84 aa3.24□□□□□ -1.89
Tpm1-205ENSMUST00000113685 Lce3dE9Q8V1 98 aa3.23□□□□□ -1.89
Tpm1-205ENSMUST00000113685 Gm40460A0A1B0GR10 244 aa3.17□□□□□ -1.9
Tpm1-205ENSMUST00000113685 Gm7579A0A1B0GRJ4 243 aa3.17□□□□□ -1.9
Tpm1-205ENSMUST00000113685 Krtap5-5Q2TA51 241 aa3.17□□□□□ -1.9
Tpm1-205ENSMUST00000113685 Muc19Q6PZE0 7524 aa3.15□□□□□ -1.9
Tpm1-205ENSMUST00000113685 Sprr2dO70555 85 aa3.15□□□□□ -1.91
Tpm1-205ENSMUST00000113685 Lce3eF8VQJ0 98 aa3.14□□□□□ -1.91
Tpm1-205ENSMUST00000113685 Lce3fQ6PAI4 98 aa3.14□□□□□ -1.91
Tpm1-205ENSMUST00000113685 Gpr98Q8VHN7 6298 aaKnown RBP3.14□□□□□ -1.91
Tpm1-205ENSMUST00000113685 Krtap5-1Q64507 230 aa3.13□□□□□ -1.91
Tpm1-205ENSMUST00000113685 4933428G20RikQ9D3X4 101 aa3.12□□□□□ -1.91
Tpm1-205ENSMUST00000113685 Hmcn1D3YXG0 5634 aa3.09□□□□□ -1.91
Tpm1-205ENSMUST00000113685 Gm4559A4IF42 199 aa3.02□□□□□ -1.93
Tpm1-205ENSMUST00000113685 Sprr2fO70557 76 aa3.02□□□□□ -1.93
Tpm1-205ENSMUST00000113685 Lce3aQ497I5 98 aa3.01□□□□□ -1.93
Tpm1-205ENSMUST00000113685 Krtap4-16Q91W93 202 aa2.98□□□□□ -1.93
Tpm1-205ENSMUST00000113685 DstQ91ZU6 7393 aaKnown RBP2.96□□□□□ -1.94
Tpm1-205ENSMUST00000113685 ObscnA2AAJ9 8891 aaKnown RBP2.96□□□□□ -1.94
Tpm1-205ENSMUST00000113685 NebE9Q1W3 7152 aa2.93□□□□□ -1.94
Tpm1-205ENSMUST00000113685 AhnakE9Q616 5656 aaKnown RBP2.73□□□□□ -1.97
Tpm1-205ENSMUST00000113685 Ndufaf8A2AMZ4 74 aa2.72□□□□□ -1.97
Tpm1-205ENSMUST00000113685 Sprr2eO70556 76 aa2.72□□□□□ -1.97
Tpm1-205ENSMUST00000113685 Sprr2hO70559 108 aa2.69□□□□□ -1.98
Tpm1-205ENSMUST00000113685 Gm10024A0A0A0MQA4 119 aa2.66□□□□□ -1.98
Tpm1-205ENSMUST00000113685 Gm9112A2AI92 75 aa2.58□□□□□ -2
Tpm1-205ENSMUST00000113685 1110025L11RikO09048 78 aa2.42□□□□□ -2.02
Tpm1-205ENSMUST00000113685 Krtap6-5Q925H3 78 aa2.42□□□□□ -2.02
Tpm1-205ENSMUST00000113685 Muc16A0A140LJ72 8478 aa2.26□□□□□ -2.05
Tpm1-205ENSMUST00000113685 Gm10229O08631 77 aa2.17□□□□□ -2.06
Tpm1-205ENSMUST00000113685 Sprr2bO70554 98 aa2.03□□□□□ -2.08
Tpm1-205ENSMUST00000113685 Krtap21-1Q925H4 128 aa1.94□□□□□ -2.1
Tpm1-205ENSMUST00000113685 Krtap6-2O08884 159 aa1.9□□□□□ -2.11
Tpm1-205ENSMUST00000113685 Phgr1Q8K0G7 91 aa1.62□□□□□ -2.15
Retrieved 80 of 22,080 RNA–protein pairs in 62 ms