RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Krtap4-1Q3UUY3 169 aa3.66□□□□□ -1.82
Trim9-202ENSMUST00000110522 SspoQ8CG65 4998 aa3.62□□□□□ -1.83
Trim9-202ENSMUST00000110522 Lce1eQ9D139 143 aa3.58□□□□□ -1.84
Trim9-202ENSMUST00000110522 Gm11596B1AQB0 205 aa3.56□□□□□ -1.84
Trim9-202ENSMUST00000110522 Krtap4-9B1AQA9 244 aa3.56□□□□□ -1.84
Trim9-202ENSMUST00000110522 Gm11564A2A4L9 201 aa3.56□□□□□ -1.84
Trim9-202ENSMUST00000110522 Gm11563B1AQ90 168 aa3.56□□□□□ -1.84
Trim9-202ENSMUST00000110522 Gm11595B1AQA7 289 aa3.56□□□□□ -1.84
Trim9-202ENSMUST00000110522 Krtap4-8B1AQA8 209 aa3.56□□□□□ -1.84
Trim9-202ENSMUST00000110522 Krtap19-4Q925H7 84 aa3.54□□□□□ -1.84
Trim9-202ENSMUST00000110522 Syne2Q6ZWQ0 6874 aaKnown RBP3.5□□□□□ -1.85
Trim9-202ENSMUST00000110522 2300003K06RikA2A4M0 262 aa3.48□□□□□ -1.85
Trim9-202ENSMUST00000110522 Krtap4-13Q9D7P3 165 aa3.46□□□□□ -1.86
Trim9-202ENSMUST00000110522 Gm11938Q9D3H4 131 aa3.45□□□□□ -1.86
Trim9-202ENSMUST00000110522 Sprr2dO70555 85 aa3.43□□□□□ -1.86
Trim9-202ENSMUST00000110522 Krtap4-7Q9D732 168 aa3.41□□□□□ -1.86
Trim9-202ENSMUST00000110522 Macf1Q9QXZ0 7354 aaKnown RBP3.37□□□□□ -1.87
Trim9-202ENSMUST00000110522 Gm11562A0PK51 136 aa3.37□□□□□ -1.87
Trim9-202ENSMUST00000110522 Gm10024A0A0A0MQA4 119 aa3.36□□□□□ -1.87
Trim9-202ENSMUST00000110522 Lce1kJ3QP15 125 aa3.36□□□□□ -1.87
Trim9-202ENSMUST00000110522 Sprr2eO70556 76 aa3.35□□□□□ -1.87
Trim9-202ENSMUST00000110522 ObscnA2AAJ9 8891 aaKnown RBP3.28□□□□□ -1.88
Trim9-202ENSMUST00000110522 Krtap31-1Q9D644 177 aa3.27□□□□□ -1.89
Trim9-202ENSMUST00000110522 Lce1a1Q9CQH5 143 aa3.21□□□□□ -1.9
Trim9-202ENSMUST00000110522 Sprr2fO70557 76 aa3.16□□□□□ -1.9
Trim9-202ENSMUST00000110522 Sprr2hO70559 108 aa3.16□□□□□ -1.9
Trim9-202ENSMUST00000110522 Krtap31-2Q8CAY5 177 aa3.15□□□□□ -1.91
Trim9-202ENSMUST00000110522 Gm11555B1AQ89 175 aa3.09□□□□□ -1.92
Trim9-202ENSMUST00000110522 Krtap20-2E9Q0A8 60 aa3.07□□□□□ -1.92
Trim9-202ENSMUST00000110522 Krtap4-16Q91W93 202 aa3.07□□□□□ -1.92
Trim9-202ENSMUST00000110522 Krtap6-3A0A087WQL6 57 aa3.03□□□□□ -1.93
Trim9-202ENSMUST00000110522 Mt3P28184 68 aa3.02□□□□□ -1.93
Trim9-202ENSMUST00000110522 Gm11554B1AQB2 190 aa3.02□□□□□ -1.93
Trim9-202ENSMUST00000110522 Mt1P02802 61 aaKnown RBP3.01□□□□□ -1.93
Trim9-202ENSMUST00000110522 Muc19Q6PZE0 7524 aa2.99□□□□□ -1.93
Trim9-202ENSMUST00000110522 DstQ91ZU6 7393 aaKnown RBP2.96□□□□□ -1.94
Trim9-202ENSMUST00000110522 NebE9Q1W3 7152 aa2.91□□□□□ -1.94
Trim9-202ENSMUST00000110522 A0A1Y7VLE6 161 aa2.85□□□□□ -1.95
Trim9-202ENSMUST00000110522 A0A1Y7VJH8 109 aa2.79□□□□□ -1.96
Trim9-202ENSMUST00000110522 Kmt2dQ6PDK2 5588 aa2.79□□□□□ -1.96
Trim9-202ENSMUST00000110522 Krtap28-10A0A1Y7VP58 119 aa2.69□□□□□ -1.98
Trim9-202ENSMUST00000110522 Krtap28-13A0A087WQP5 138 aa2.69□□□□□ -1.98
Trim9-202ENSMUST00000110522 A030005K14RikA0A1Y7VNY1 122 aa2.69□□□□□ -1.98
Trim9-202ENSMUST00000110522 Gm11568A2A4M2 211 aa2.65□□□□□ -1.99
Trim9-202ENSMUST00000110522 Krtap9-1Q64526 186 aa2.65□□□□□ -1.99
Trim9-202ENSMUST00000110522 A030003K21RikA0A1Y7VIM3 128 aa2.64□□□□□ -1.99
Trim9-202ENSMUST00000110522 A0A1Y7VJ07 166 aa2.6□□□□□ -1.99
Trim9-202ENSMUST00000110522 Gm7544A0A1Y7VJ58 118 aa2.51□□□□□ -2.01
Trim9-202ENSMUST00000110522 Gm6217A0A1Y7VJK9 128 aa2.5□□□□□ -2.01
Trim9-202ENSMUST00000110522 Eppk1Q8R0W0 6548 aa2.5□□□□□ -2.01
Trim9-202ENSMUST00000110522 Hmcn1D3YXG0 5634 aa2.5□□□□□ -2.01
Trim9-202ENSMUST00000110522 Gm11559Q9D3H7 191 aa2.5□□□□□ -2.01
Trim9-202ENSMUST00000110522 Gm11639A0A1D5RLM8 5808 aa2.46□□□□□ -2.02
Trim9-202ENSMUST00000110522 Gpr98Q8VHN7 6298 aaKnown RBP2.44□□□□□ -2.02
Trim9-202ENSMUST00000110522 A030005L19RikA0A1Y7VIU2 113 aa2.43□□□□□ -2.02
Trim9-202ENSMUST00000110522 Sprr2bO70554 98 aa2.42□□□□□ -2.02
Trim9-202ENSMUST00000110522 1110025L11RikO09048 78 aa2.41□□□□□ -2.02
Trim9-202ENSMUST00000110522 Krtap6-5Q925H3 78 aa2.41□□□□□ -2.02
Trim9-202ENSMUST00000110522 Krtap5-2Q9D5Z7 189 aa2.41□□□□□ -2.02
Trim9-202ENSMUST00000110522 A030014E15RikA0A1Y7VJV2 120 aa2.4□□□□□ -2.02
Trim9-202ENSMUST00000110522 Gm4553A0A1B0GSA9 284 aa2.24□□□□□ -2.05
Trim9-202ENSMUST00000110522 Gm10229O08631 77 aa2.22□□□□□ -2.05
Trim9-202ENSMUST00000110522 Gm10153A0A1B0GRL1 320 aa2.18□□□□□ -2.06
Trim9-202ENSMUST00000110522 Gm2431E9Q8S1 172 aa2.18□□□□□ -2.06
Trim9-202ENSMUST00000110522 AhnakE9Q616 5656 aaKnown RBP2.1□□□□□ -2.07
Trim9-202ENSMUST00000110522 Gm45337A0A1B0GS71 263 aa2.04□□□□□ -2.08
Trim9-202ENSMUST00000110522 A0A286YCP9 139 aa2.04□□□□□ -2.08
Trim9-202ENSMUST00000110522 Phgr1Q8K0G7 91 aa2.03□□□□□ -2.08
Trim9-202ENSMUST00000110522 Gm40460A0A1B0GR10 244 aa1.98□□□□□ -2.09
Trim9-202ENSMUST00000110522 Gm7579A0A1B0GRJ4 243 aa1.98□□□□□ -2.09
Trim9-202ENSMUST00000110522 Krtap5-5Q2TA51 241 aa1.98□□□□□ -2.09
Trim9-202ENSMUST00000110522 Krtap5-4Q62220 223 aa1.98□□□□□ -2.09
Trim9-202ENSMUST00000110522 Krtap6-2O08884 159 aa1.85□□□□□ -2.11
Trim9-202ENSMUST00000110522 Gm39115A0A1B0GSH7 232 aa1.83□□□□□ -2.12
Trim9-202ENSMUST00000110522 Krtap21-1Q925H4 128 aa1.81□□□□□ -2.12
Trim9-202ENSMUST00000110522 Gm11567Q9D141 195 aa1.74□□□□□ -2.13
Trim9-202ENSMUST00000110522 Gm45618A0A1B0GSA0 219 aa1.54□□□□□ -2.16
Trim9-202ENSMUST00000110522 Gm29735A0A1B0GT06 219 aa1.48□□□□□ -2.17
Trim9-202ENSMUST00000110522 Krtap5-1Q64507 230 aa1.11□□□□□ -2.23
Trim9-202ENSMUST00000110522 Gm4559A4IF42 199 aa0.86□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 99.7 ms