RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Gm11595B1AQA7 289 aa3.1□□□□□ -1.91
Trim9-201ENSMUST00000110520 Krtap4-8B1AQA8 209 aa3.1□□□□□ -1.91
Trim9-201ENSMUST00000110520 Krtap4-9B1AQA9 244 aa3.08□□□□□ -1.92
Trim9-201ENSMUST00000110520 Lce3dE9Q8V1 98 aa3.07□□□□□ -1.92
Trim9-201ENSMUST00000110520 Lce1bQ9D149 137 aa3.05□□□□□ -1.92
Trim9-201ENSMUST00000110520 Lce1lQ9D1G7 135 aa3.04□□□□□ -1.92
Trim9-201ENSMUST00000110520 Gm11938Q9D3H4 131 aa3.03□□□□□ -1.92
Trim9-201ENSMUST00000110520 Lce3aQ497I5 98 aa3.02□□□□□ -1.93
Trim9-201ENSMUST00000110520 Sprr2iO70560 76 aa3.02□□□□□ -1.93
Trim9-201ENSMUST00000110520 Lce1cQ9D1C5 147 aa3.02□□□□□ -1.93
Trim9-201ENSMUST00000110520 Lce1fB9EJP6 147 aa3.02□□□□□ -1.93
Trim9-201ENSMUST00000110520 Lce1eQ9D139 143 aa3.02□□□□□ -1.93
Trim9-201ENSMUST00000110520 Sprr2dO70555 85 aa3.01□□□□□ -1.93
Trim9-201ENSMUST00000110520 Krtap4-13Q9D7P3 165 aa2.99□□□□□ -1.93
Trim9-201ENSMUST00000110520 Gm11562A0PK51 136 aa2.97□□□□□ -1.93
Trim9-201ENSMUST00000110520 2300003K06RikA2A4M0 262 aa2.96□□□□□ -1.94
Trim9-201ENSMUST00000110520 Krtap19-4Q925H7 84 aa2.95□□□□□ -1.94
Trim9-201ENSMUST00000110520 Krtap4-7Q9D732 168 aa2.93□□□□□ -1.94
Trim9-201ENSMUST00000110520 ObscnA2AAJ9 8891 aaKnown RBP2.92□□□□□ -1.94
Trim9-201ENSMUST00000110520 Lce1a1Q9CQH5 143 aa2.89□□□□□ -1.95
Trim9-201ENSMUST00000110520 Lce1kJ3QP15 125 aa2.86□□□□□ -1.95
Trim9-201ENSMUST00000110520 DstQ91ZU6 7393 aaKnown RBP2.84□□□□□ -1.95
Trim9-201ENSMUST00000110520 Sprr2fO70557 76 aa2.82□□□□□ -1.96
Trim9-201ENSMUST00000110520 Gm11555B1AQ89 175 aa2.79□□□□□ -1.96
Trim9-201ENSMUST00000110520 Sprr2eO70556 76 aa2.79□□□□□ -1.96
Trim9-201ENSMUST00000110520 Krtap6-3A0A087WQL6 57 aa2.75□□□□□ -1.97
Trim9-201ENSMUST00000110520 Muc19Q6PZE0 7524 aa2.74□□□□□ -1.97
Trim9-201ENSMUST00000110520 Krtap31-1Q9D644 177 aa2.73□□□□□ -1.97
Trim9-201ENSMUST00000110520 Gm10024A0A0A0MQA4 119 aa2.73□□□□□ -1.97
Trim9-201ENSMUST00000110520 NebE9Q1W3 7152 aa2.71□□□□□ -1.98
Trim9-201ENSMUST00000110520 Krtap4-16Q91W93 202 aa2.7□□□□□ -1.98
Trim9-201ENSMUST00000110520 Sprr2hO70559 108 aa2.69□□□□□ -1.98
Trim9-201ENSMUST00000110520 A0A1Y7VJH8 109 aa2.64□□□□□ -1.99
Trim9-201ENSMUST00000110520 Krtap20-2E9Q0A8 60 aa2.64□□□□□ -1.99
Trim9-201ENSMUST00000110520 Gm11554B1AQB2 190 aa2.6□□□□□ -1.99
Trim9-201ENSMUST00000110520 A0A1Y7VLE6 161 aa2.58□□□□□ -2
Trim9-201ENSMUST00000110520 Mt1P02802 61 aaKnown RBP2.58□□□□□ -2
Trim9-201ENSMUST00000110520 Krtap28-10A0A1Y7VP58 119 aa2.53□□□□□ -2
Trim9-201ENSMUST00000110520 Mt3P28184 68 aa2.47□□□□□ -2.01
Trim9-201ENSMUST00000110520 Kmt2dQ6PDK2 5588 aa2.45□□□□□ -2.02
Trim9-201ENSMUST00000110520 Krtap31-2Q8CAY5 177 aa2.44□□□□□ -2.02
Trim9-201ENSMUST00000110520 Krtap28-13A0A087WQP5 138 aa2.41□□□□□ -2.02
Trim9-201ENSMUST00000110520 Eppk1Q8R0W0 6548 aa2.39□□□□□ -2.03
Trim9-201ENSMUST00000110520 Gm11568A2A4M2 211 aa2.38□□□□□ -2.03
Trim9-201ENSMUST00000110520 Krtap9-1Q64526 186 aa2.38□□□□□ -2.03
Trim9-201ENSMUST00000110520 A030005L19RikA0A1Y7VIU2 113 aa2.36□□□□□ -2.03
Trim9-201ENSMUST00000110520 Hmcn1D3YXG0 5634 aa2.34□□□□□ -2.03
Trim9-201ENSMUST00000110520 Gm7544A0A1Y7VJ58 118 aa2.34□□□□□ -2.03
Trim9-201ENSMUST00000110520 A030005K14RikA0A1Y7VNY1 122 aa2.34□□□□□ -2.04
Trim9-201ENSMUST00000110520 A030003K21RikA0A1Y7VIM3 128 aa2.3□□□□□ -2.04
Trim9-201ENSMUST00000110520 Gpr98Q8VHN7 6298 aaKnown RBP2.27□□□□□ -2.05
Trim9-201ENSMUST00000110520 Gm11639A0A1D5RLM8 5808 aa2.26□□□□□ -2.05
Trim9-201ENSMUST00000110520 Sprr2bO70554 98 aa2.21□□□□□ -2.05
Trim9-201ENSMUST00000110520 Gm11559Q9D3H7 191 aa2.21□□□□□ -2.06
Trim9-201ENSMUST00000110520 A0A1Y7VJ07 166 aa2.18□□□□□ -2.06
Trim9-201ENSMUST00000110520 Gm6217A0A1Y7VJK9 128 aa2.15□□□□□ -2.06
Trim9-201ENSMUST00000110520 Krtap5-2Q9D5Z7 189 aa2.15□□□□□ -2.06
Trim9-201ENSMUST00000110520 Gm10153A0A1B0GRL1 320 aa2.05□□□□□ -2.08
Trim9-201ENSMUST00000110520 1110025L11RikO09048 78 aa2.03□□□□□ -2.08
Trim9-201ENSMUST00000110520 Krtap6-5Q925H3 78 aa2.03□□□□□ -2.08
Trim9-201ENSMUST00000110520 A030014E15RikA0A1Y7VJV2 120 aa2.01□□□□□ -2.09
Trim9-201ENSMUST00000110520 Gm4553A0A1B0GSA9 284 aa1.99□□□□□ -2.09
Trim9-201ENSMUST00000110520 Gm2431E9Q8S1 172 aa1.99□□□□□ -2.09
Trim9-201ENSMUST00000110520 Gm45337A0A1B0GS71 263 aa1.89□□□□□ -2.11
Trim9-201ENSMUST00000110520 Gm40460A0A1B0GR10 244 aa1.86□□□□□ -2.11
Trim9-201ENSMUST00000110520 Gm7579A0A1B0GRJ4 243 aa1.86□□□□□ -2.11
Trim9-201ENSMUST00000110520 Krtap5-5Q2TA51 241 aa1.86□□□□□ -2.11
Trim9-201ENSMUST00000110520 Krtap5-4Q62220 223 aa1.86□□□□□ -2.11
Trim9-201ENSMUST00000110520 Gm10229O08631 77 aa1.85□□□□□ -2.11
Trim9-201ENSMUST00000110520 AhnakE9Q616 5656 aaKnown RBP1.83□□□□□ -2.12
Trim9-201ENSMUST00000110520 A0A286YCP9 139 aa1.81□□□□□ -2.12
Trim9-201ENSMUST00000110520 Phgr1Q8K0G7 91 aa1.73□□□□□ -2.13
Trim9-201ENSMUST00000110520 Gm39115A0A1B0GSH7 232 aa1.67□□□□□ -2.14
Trim9-201ENSMUST00000110520 Gm11567Q9D141 195 aa1.6□□□□□ -2.15
Trim9-201ENSMUST00000110520 Krtap21-1Q925H4 128 aa1.57□□□□□ -2.16
Trim9-201ENSMUST00000110520 Krtap6-2O08884 159 aa1.55□□□□□ -2.16
Trim9-201ENSMUST00000110520 Gm45618A0A1B0GSA0 219 aa1.49□□□□□ -2.17
Trim9-201ENSMUST00000110520 Gm29735A0A1B0GT06 219 aa1.43□□□□□ -2.18
Trim9-201ENSMUST00000110520 Krtap5-1Q64507 230 aa1.05□□□□□ -2.24
Trim9-201ENSMUST00000110520 Gm4559A4IF42 199 aa0.85□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 109.7 ms