RNA–Protein interactions for RNA: ENSMUST00000110053.8

Use1-202, Transcript of Vesicle transport protein USE1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Use1, Length 1,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Use1-202ENSMUST00000110053 Camk2n1Q6QWF9 78 aa4.28□□□□□ -1.72
Use1-202ENSMUST00000110053 4933415A04RikQ9D443 101 aa4.25□□□□□ -1.73
Use1-202ENSMUST00000110053 Krtap5-2Q9D5Z7 189 aa4.2□□□□□ -1.74
Use1-202ENSMUST00000110053 Gm6217A0A1Y7VJK9 128 aa4.18□□□□□ -1.74
Use1-202ENSMUST00000110053 Lce1kJ3QP15 125 aa4.16□□□□□ -1.74
Use1-202ENSMUST00000110053 Gm11559Q9D3H7 191 aa4.16□□□□□ -1.74
Use1-202ENSMUST00000110053 Sprr2iO70560 76 aa4.15□□□□□ -1.75
Use1-202ENSMUST00000110053 Gm11554B1AQB2 190 aa4.11□□□□□ -1.75
Use1-202ENSMUST00000110053 Syne1Q6ZWR6 8799 aa4.07□□□□□ -1.76
Use1-202ENSMUST00000110053 Gm3646F6S692 53 aa4.06□□□□□ -1.76
Use1-202ENSMUST00000110053 Ndufs5Q99LY9 106 aa4.06□□□□□ -1.76
Use1-202ENSMUST00000110053 Gm11639A0A1D5RLM8 5808 aa4.05□□□□□ -1.76
Use1-202ENSMUST00000110053 Kmt2dQ6PDK2 5588 aa4.05□□□□□ -1.76
Use1-202ENSMUST00000110053 Gm11568A2A4M2 211 aa4.05□□□□□ -1.76
Use1-202ENSMUST00000110053 Krtap9-1Q64526 186 aa4.05□□□□□ -1.76
Use1-202ENSMUST00000110053 Macf1Q9QXZ0 7354 aaKnown RBP4.05□□□□□ -1.76
Use1-202ENSMUST00000110053 Gm3880A0A1B0GSB3 72 aa4.03□□□□□ -1.76
Use1-202ENSMUST00000110053 Gm4553A0A1B0GSA9 284 aa4.02□□□□□ -1.77
Use1-202ENSMUST00000110053 Lce3bQ9CQM7 98 aa4□□□□□ -1.77
Use1-202ENSMUST00000110053 Gm20538F6Z9R1 75 aa3.98□□□□□ -1.77
Use1-202ENSMUST00000110053 Gm10272F7CZ33 110 aa3.96□□□□□ -1.78
Use1-202ENSMUST00000110053 Gm2431E9Q8S1 172 aa3.93□□□□□ -1.78
Use1-202ENSMUST00000110053 Gm12216A0A1W2P827 62 aa3.91□□□□□ -1.78
Use1-202ENSMUST00000110053 Krtap7-1Q9D3I6 87 aa3.91□□□□□ -1.78
Use1-202ENSMUST00000110053 Lce1fB9EJP6 147 aa3.87□□□□□ -1.79
Use1-202ENSMUST00000110053 Lce1cQ9D1C5 147 aa3.87□□□□□ -1.79
Use1-202ENSMUST00000110053 Gm45337A0A1B0GS71 263 aa3.84□□□□□ -1.79
Use1-202ENSMUST00000110053 Mp68P56379 58 aa3.84□□□□□ -1.79
Use1-202ENSMUST00000110053 Gpr98Q8VHN7 6298 aaKnown RBP3.84□□□□□ -1.8
Use1-202ENSMUST00000110053 A0A286YCP9 139 aa3.82□□□□□ -1.8
Use1-202ENSMUST00000110053 Muc19Q6PZE0 7524 aa3.8□□□□□ -1.8
Use1-202ENSMUST00000110053 Romo1P60603 79 aa3.79□□□□□ -1.8
Use1-202ENSMUST00000110053 Hmcn1D3YXG0 5634 aa3.75□□□□□ -1.81
Use1-202ENSMUST00000110053 Gm10153A0A1B0GRL1 320 aa3.74□□□□□ -1.81
Use1-202ENSMUST00000110053 Gm11938Q9D3H4 131 aa3.71□□□□□ -1.82
Use1-202ENSMUST00000110053 Gm40460A0A1B0GR10 244 aa3.7□□□□□ -1.82
Use1-202ENSMUST00000110053 Gm7579A0A1B0GRJ4 243 aa3.7□□□□□ -1.82
Use1-202ENSMUST00000110053 Mt1P02802 61 aaKnown RBP3.7□□□□□ -1.82
Use1-202ENSMUST00000110053 Krtap5-5Q2TA51 241 aa3.7□□□□□ -1.82
Use1-202ENSMUST00000110053 Krtap5-4Q62220 223 aa3.7□□□□□ -1.82
Use1-202ENSMUST00000110053 Krtap19-4Q925H7 84 aa3.7□□□□□ -1.82
Use1-202ENSMUST00000110053 DstQ91ZU6 7393 aaKnown RBP3.67□□□□□ -1.82
Use1-202ENSMUST00000110053 Gm39115A0A1B0GSH7 232 aa3.66□□□□□ -1.82
Use1-202ENSMUST00000110053 Tnp1P10856 55 aa3.65□□□□□ -1.83
Use1-202ENSMUST00000110053 NebE9Q1W3 7152 aa3.57□□□□□ -1.84
Use1-202ENSMUST00000110053 Lce3cQ91V05 98 aa3.55□□□□□ -1.84
Use1-202ENSMUST00000110053 Gm40193A0A1B0GT39 78 aa3.54□□□□□ -1.84
Use1-202ENSMUST00000110053 Krtap4-16Q91W93 202 aa3.5□□□□□ -1.85
Use1-202ENSMUST00000110053 Lce3dE9Q8V1 98 aa3.49□□□□□ -1.85
Use1-202ENSMUST00000110053 Gm45618A0A1B0GSA0 219 aa3.43□□□□□ -1.86
Use1-202ENSMUST00000110053 AhnakE9Q616 5656 aaKnown RBP3.43□□□□□ -1.86
Use1-202ENSMUST00000110053 Sprr2fO70557 76 aa3.42□□□□□ -1.86
Use1-202ENSMUST00000110053 Mt3P28184 68 aa3.41□□□□□ -1.86
Use1-202ENSMUST00000110053 ObscnA2AAJ9 8891 aaKnown RBP3.39□□□□□ -1.87
Use1-202ENSMUST00000110053 Lce3eF8VQJ0 98 aa3.36□□□□□ -1.87
Use1-202ENSMUST00000110053 Lce3fQ6PAI4 98 aa3.36□□□□□ -1.87
Use1-202ENSMUST00000110053 Gm9112A2AI92 75 aa3.34□□□□□ -1.87
Use1-202ENSMUST00000110053 Ndufaf8A2AMZ4 74 aa3.33□□□□□ -1.88
Use1-202ENSMUST00000110053 4933428G20RikQ9D3X4 101 aa3.25□□□□□ -1.89
Use1-202ENSMUST00000110053 Gm10100J3QK64 120 aa3.22□□□□□ -1.89
Use1-202ENSMUST00000110053 Lce3aQ497I5 98 aa3.21□□□□□ -1.9
Use1-202ENSMUST00000110053 Sprr2dO70555 85 aa3.14□□□□□ -1.91
Use1-202ENSMUST00000110053 Sprr2eO70556 76 aa3.02□□□□□ -1.93
Use1-202ENSMUST00000110053 Gm29735A0A1B0GT06 219 aa2.93□□□□□ -1.94
Use1-202ENSMUST00000110053 Krtap31-2Q8CAY5 177 aa2.91□□□□□ -1.94
Use1-202ENSMUST00000110053 Gm10024A0A0A0MQA4 119 aa2.89□□□□□ -1.95
Use1-202ENSMUST00000110053 Krtap31-1Q9D644 177 aa2.83□□□□□ -1.96
Use1-202ENSMUST00000110053 Gm10142J3KMP7 120 aa2.79□□□□□ -1.96
Use1-202ENSMUST00000110053 Gm11567Q9D141 195 aa2.78□□□□□ -1.96
Use1-202ENSMUST00000110053 Muc16A0A140LJ72 8478 aa2.77□□□□□ -1.97
Use1-202ENSMUST00000110053 Sprr2hO70559 108 aa2.75□□□□□ -1.97
Use1-202ENSMUST00000110053 1110025L11RikO09048 78 aa2.62□□□□□ -1.99
Use1-202ENSMUST00000110053 Krtap6-5Q925H3 78 aa2.62□□□□□ -1.99
Use1-202ENSMUST00000110053 Gm10229O08631 77 aa2.36□□□□□ -2.03
Use1-202ENSMUST00000110053 Sprr2bO70554 98 aa2.15□□□□□ -2.07
Use1-202ENSMUST00000110053 Krtap5-1Q64507 230 aa2.14□□□□□ -2.07
Use1-202ENSMUST00000110053 Krtap6-2O08884 159 aa2.11□□□□□ -2.07
Use1-202ENSMUST00000110053 Krtap21-1Q925H4 128 aa2.11□□□□□ -2.07
Use1-202ENSMUST00000110053 Gm4559A4IF42 199 aa2.1□□□□□ -2.07
Use1-202ENSMUST00000110053 Phgr1Q8K0G7 91 aa1.7□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 65.7 ms