RNA–Protein interactions for RNA: ENSMUST00000109468.2

Top1-201, Transcript of DNA topoisomerase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Top1, Length 3,856 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Top1-201ENSMUST00000109468 Lce1eQ9D139 143 aa3.43□□□□□ -1.86
Top1-201ENSMUST00000109468 Gm11938Q9D3H4 131 aa3.43□□□□□ -1.86
Top1-201ENSMUST00000109468 Gm10142J3KMP7 120 aa3.42□□□□□ -1.86
Top1-201ENSMUST00000109468 Lce3cQ91V05 98 aa3.37□□□□□ -1.87
Top1-201ENSMUST00000109468 Fsip2A2ARZ3 6995 aa3.36□□□□□ -1.87
Top1-201ENSMUST00000109468 Lce1cQ9D1C5 147 aa3.36□□□□□ -1.87
Top1-201ENSMUST00000109468 Gm38119A0A0A6YX29 146 aa3.34□□□□□ -1.87
Top1-201ENSMUST00000109468 Sprr2dO70555 85 aa3.34□□□□□ -1.87
Top1-201ENSMUST00000109468 Lce3eF8VQJ0 98 aa3.32□□□□□ -1.88
Top1-201ENSMUST00000109468 Lce3fQ6PAI4 98 aa3.32□□□□□ -1.88
Top1-201ENSMUST00000109468 Lce3dE9Q8V1 98 aa3.31□□□□□ -1.88
Top1-201ENSMUST00000109468 Sprr2kO70562 68 aa3.3□□□□□ -1.88
Top1-201ENSMUST00000109468 Krtap4-6Q3V4B7 195 aa3.3□□□□□ -1.88
Top1-201ENSMUST00000109468 Gm11562A0PK51 136 aa3.29□□□□□ -1.88
Top1-201ENSMUST00000109468 Krtap19-4Q925H7 84 aa3.25□□□□□ -1.89
Top1-201ENSMUST00000109468 Lce1fB9EJP6 147 aa3.22□□□□□ -1.89
Top1-201ENSMUST00000109468 Lce1a1Q9CQH5 143 aa3.22□□□□□ -1.89
Top1-201ENSMUST00000109468 Mt4P47945 62 aa3.2□□□□□ -1.9
Top1-201ENSMUST00000109468 Syne2Q6ZWQ0 6874 aaKnown RBP3.18□□□□□ -1.9
Top1-201ENSMUST00000109468 Lce3aQ497I5 98 aa3.18□□□□□ -1.9
Top1-201ENSMUST00000109468 Lce1gQ9D195 139 aa3.13□□□□□ -1.91
Top1-201ENSMUST00000109468 Lce1bQ9D149 137 aa3.12□□□□□ -1.91
Top1-201ENSMUST00000109468 ObscnA2AAJ9 8891 aaKnown RBP3.12□□□□□ -1.91
Top1-201ENSMUST00000109468 Lce1lQ9D1G7 135 aa3.11□□□□□ -1.91
Top1-201ENSMUST00000109468 Gm11564A2A4L9 201 aa3.05□□□□□ -1.92
Top1-201ENSMUST00000109468 Gm11595B1AQA7 289 aa3.05□□□□□ -1.92
Top1-201ENSMUST00000109468 Krtap4-8B1AQA8 209 aa3.05□□□□□ -1.92
Top1-201ENSMUST00000109468 Krtap4-9B1AQA9 244 aa3.05□□□□□ -1.92
Top1-201ENSMUST00000109468 Sprr2iO70560 76 aa3.03□□□□□ -1.92
Top1-201ENSMUST00000109468 Gm11596B1AQB0 205 aa3.02□□□□□ -1.93
Top1-201ENSMUST00000109468 Sprr2hO70559 108 aa3.02□□□□□ -1.93
Top1-201ENSMUST00000109468 Krtap31-1Q9D644 177 aa3.02□□□□□ -1.93
Top1-201ENSMUST00000109468 2300003K06RikA2A4M0 262 aa2.99□□□□□ -1.93
Top1-201ENSMUST00000109468 Krtap4-13Q9D7P3 165 aa2.98□□□□□ -1.93
Top1-201ENSMUST00000109468 Lce1kJ3QP15 125 aa2.97□□□□□ -1.93
Top1-201ENSMUST00000109468 Krtap4-16Q91W93 202 aa2.96□□□□□ -1.93
Top1-201ENSMUST00000109468 Macf1Q9QXZ0 7354 aaKnown RBP2.95□□□□□ -1.94
Top1-201ENSMUST00000109468 Sprr2fO70557 76 aa2.93□□□□□ -1.94
Top1-201ENSMUST00000109468 Sprr2eO70556 76 aa2.9□□□□□ -1.95
Top1-201ENSMUST00000109468 Gm10024A0A0A0MQA4 119 aa2.88□□□□□ -1.95
Top1-201ENSMUST00000109468 Mt1P02802 61 aaKnown RBP2.79□□□□□ -1.96
Top1-201ENSMUST00000109468 Muc19Q6PZE0 7524 aa2.72□□□□□ -1.97
Top1-201ENSMUST00000109468 Gm45618A0A1B0GSA0 219 aa2.71□□□□□ -1.97
Top1-201ENSMUST00000109468 Krtap20-2E9Q0A8 60 aa2.71□□□□□ -1.98
Top1-201ENSMUST00000109468 Krtap31-2Q8CAY5 177 aa2.67□□□□□ -1.98
Top1-201ENSMUST00000109468 Mt3P28184 68 aa2.59□□□□□ -1.99
Top1-201ENSMUST00000109468 DstQ91ZU6 7393 aaKnown RBP2.58□□□□□ -2
Top1-201ENSMUST00000109468 Gm11568A2A4M2 211 aa2.54□□□□□ -2
Top1-201ENSMUST00000109468 Krtap9-1Q64526 186 aa2.54□□□□□ -2
Top1-201ENSMUST00000109468 Gm39115A0A1B0GSH7 232 aa2.53□□□□□ -2
Top1-201ENSMUST00000109468 Gm11554B1AQB2 190 aa2.52□□□□□ -2.01
Top1-201ENSMUST00000109468 Krtap6-3A0A087WQL6 57 aa2.47□□□□□ -2.01
Top1-201ENSMUST00000109468 Kmt2dQ6PDK2 5588 aa2.47□□□□□ -2.01
Top1-201ENSMUST00000109468 Hmcn1D3YXG0 5634 aa2.42□□□□□ -2.02
Top1-201ENSMUST00000109468 NebE9Q1W3 7152 aa2.38□□□□□ -2.03
Top1-201ENSMUST00000109468 Gm29735A0A1B0GT06 219 aa2.37□□□□□ -2.03
Top1-201ENSMUST00000109468 Eppk1Q8R0W0 6548 aa2.35□□□□□ -2.03
Top1-201ENSMUST00000109468 Gm2431E9Q8S1 172 aa2.31□□□□□ -2.04
Top1-201ENSMUST00000109468 Krtap5-2Q9D5Z7 189 aa2.3□□□□□ -2.04
Top1-201ENSMUST00000109468 Gm11559Q9D3H7 191 aa2.21□□□□□ -2.06
Top1-201ENSMUST00000109468 Gm10153A0A1B0GRL1 320 aa2.21□□□□□ -2.06
Top1-201ENSMUST00000109468 1110025L11RikO09048 78 aa2.2□□□□□ -2.06
Top1-201ENSMUST00000109468 Krtap6-5Q925H3 78 aa2.2□□□□□ -2.06
Top1-201ENSMUST00000109468 Gm11567Q9D141 195 aa2.18□□□□□ -2.06
Top1-201ENSMUST00000109468 Gm45337A0A1B0GS71 263 aa2.13□□□□□ -2.07
Top1-201ENSMUST00000109468 Gm11639A0A1D5RLM8 5808 aa2.11□□□□□ -2.07
Top1-201ENSMUST00000109468 Gm4553A0A1B0GSA9 284 aa2.09□□□□□ -2.07
Top1-201ENSMUST00000109468 Sprr2bO70554 98 aa2.03□□□□□ -2.08
Top1-201ENSMUST00000109468 Krtap5-4Q62220 223 aa2.01□□□□□ -2.09
Top1-201ENSMUST00000109468 Gm10229O08631 77 aa1.98□□□□□ -2.09
Top1-201ENSMUST00000109468 AhnakE9Q616 5656 aaKnown RBP1.96□□□□□ -2.1
Top1-201ENSMUST00000109468 Gm40460A0A1B0GR10 244 aa1.93□□□□□ -2.1
Top1-201ENSMUST00000109468 Gm7579A0A1B0GRJ4 243 aa1.93□□□□□ -2.1
Top1-201ENSMUST00000109468 Krtap5-5Q2TA51 241 aa1.93□□□□□ -2.1
Top1-201ENSMUST00000109468 Gpr98Q8VHN7 6298 aaKnown RBP1.91□□□□□ -2.1
Top1-201ENSMUST00000109468 Phgr1Q8K0G7 91 aa1.88□□□□□ -2.11
Top1-201ENSMUST00000109468 Krtap5-1Q64507 230 aa1.85□□□□□ -2.11
Top1-201ENSMUST00000109468 Gm4559A4IF42 199 aa1.77□□□□□ -2.13
Top1-201ENSMUST00000109468 Krtap21-1Q925H4 128 aa1.74□□□□□ -2.13
Top1-201ENSMUST00000109468 Krtap6-2O08884 159 aa1.65□□□□□ -2.15
Retrieved 80 of 22,080 RNA–protein pairs in 140.9 ms