RNA–Protein interactions for RNA: ENSMUST00000103220.3

Snrnp200-201, Transcript of U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp200, Length 6,745 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200-201ENSMUST00000103220 Rnf213E9Q555 5152 aaKnown RBP2.83□□□□□ -1.96
Snrnp200-201ENSMUST00000103220 Krtap6-3A0A087WQL6 57 aa2.82□□□□□ -1.96
Snrnp200-201ENSMUST00000103220 Krtap17-1A2A5X6 109 aa2.81□□□□□ -1.96
Snrnp200-201ENSMUST00000103220 Krtap4-1Q3UUY3 169 aa2.79□□□□□ -1.96
Snrnp200-201ENSMUST00000103220 Krtap31-2Q8CAY5 177 aa2.78□□□□□ -1.96
Snrnp200-201ENSMUST00000103220 Ush2AQ2QI47 5193 aa2.77□□□□□ -1.97
Snrnp200-201ENSMUST00000103220 2300003K06RikA2A4M0 262 aa2.75□□□□□ -1.97
Snrnp200-201ENSMUST00000103220 Gm11564A2A4L9 201 aa2.74□□□□□ -1.97
Snrnp200-201ENSMUST00000103220 Gm11563B1AQ90 168 aa2.74□□□□□ -1.97
Snrnp200-201ENSMUST00000103220 Gm11595B1AQA7 289 aa2.74□□□□□ -1.97
Snrnp200-201ENSMUST00000103220 Krtap4-8B1AQA8 209 aa2.74□□□□□ -1.97
Snrnp200-201ENSMUST00000103220 Krtap31-1Q9D644 177 aa2.74□□□□□ -1.97
Snrnp200-201ENSMUST00000103220 Krtap4-7Q9D732 168 aa2.73□□□□□ -1.97
Snrnp200-201ENSMUST00000103220 Krtap4-9B1AQA9 244 aa2.72□□□□□ -1.97
Snrnp200-201ENSMUST00000103220 Lce1a2Q9D1K4 149 aa2.72□□□□□ -1.97
Snrnp200-201ENSMUST00000103220 Sprr2hO70559 108 aa2.71□□□□□ -1.97
Snrnp200-201ENSMUST00000103220 SspoQ8CG65 4998 aa2.69□□□□□ -1.98
Snrnp200-201ENSMUST00000103220 Krtap4-13Q9D7P3 165 aa2.65□□□□□ -1.99
Snrnp200-201ENSMUST00000103220 Hmcn2A2AJ76 5100 aa2.65□□□□□ -1.99
Snrnp200-201ENSMUST00000103220 Syne2Q6ZWQ0 6874 aaKnown RBP2.65□□□□□ -1.99
Snrnp200-201ENSMUST00000103220 Gm11555B1AQ89 175 aa2.64□□□□□ -1.99
Snrnp200-201ENSMUST00000103220 Gm11938Q9D3H4 131 aa2.64□□□□□ -1.99
Snrnp200-201ENSMUST00000103220 Krtap4-16Q91W93 202 aa2.63□□□□□ -1.99
Snrnp200-201ENSMUST00000103220 Lce1kJ3QP15 125 aa2.62□□□□□ -1.99
Snrnp200-201ENSMUST00000103220 Mt3P28184 68 aa2.6□□□□□ -1.99
Snrnp200-201ENSMUST00000103220 Sprr2dO70555 85 aa2.6□□□□□ -1.99
Snrnp200-201ENSMUST00000103220 Krtap20-2E9Q0A8 60 aa2.54□□□□□ -2
Snrnp200-201ENSMUST00000103220 Lce1a1Q9CQH5 143 aa2.54□□□□□ -2
Snrnp200-201ENSMUST00000103220 Gpr98Q8VHN7 6298 aaKnown RBP2.49□□□□□ -2.01
Snrnp200-201ENSMUST00000103220 Sprr2bO70554 98 aa2.45□□□□□ -2.02
Snrnp200-201ENSMUST00000103220 Syne1Q6ZWR6 8799 aa2.43□□□□□ -2.02
Snrnp200-201ENSMUST00000103220 Fsip2A2ARZ3 6995 aa2.42□□□□□ -2.02
Snrnp200-201ENSMUST00000103220 Gm11554B1AQB2 190 aa2.42□□□□□ -2.02
Snrnp200-201ENSMUST00000103220 Mt1P02802 61 aaKnown RBP2.31□□□□□ -2.04
Snrnp200-201ENSMUST00000103220 Gm11639A0A1D5RLM8 5808 aa2.26□□□□□ -2.05
Snrnp200-201ENSMUST00000103220 Kmt2dQ6PDK2 5588 aa2.26□□□□□ -2.05
Snrnp200-201ENSMUST00000103220 A030005L19RikA0A1Y7VIU2 113 aa2.19□□□□□ -2.06
Snrnp200-201ENSMUST00000103220 Gm11559Q9D3H7 191 aa2.14□□□□□ -2.07
Snrnp200-201ENSMUST00000103220 ObscnA2AAJ9 8891 aaKnown RBP2.12□□□□□ -2.07
Snrnp200-201ENSMUST00000103220 Krtap5-2Q9D5Z7 189 aa2.12□□□□□ -2.07
Snrnp200-201ENSMUST00000103220 Gm4553A0A1B0GSA9 284 aa2.08□□□□□ -2.08
Snrnp200-201ENSMUST00000103220 Hmcn1D3YXG0 5634 aa2.07□□□□□ -2.08
Snrnp200-201ENSMUST00000103220 Krtap9-1Q64526 186 aa2.01□□□□□ -2.09
Snrnp200-201ENSMUST00000103220 Macf1Q9QXZ0 7354 aaKnown RBP1.99□□□□□ -2.09
Snrnp200-201ENSMUST00000103220 DstQ91ZU6 7393 aaKnown RBP1.98□□□□□ -2.09
Snrnp200-201ENSMUST00000103220 Muc16A0A140LJ72 8478 aa1.95□□□□□ -2.1
Snrnp200-201ENSMUST00000103220 Gm40460A0A1B0GR10 244 aa1.92□□□□□ -2.1
Snrnp200-201ENSMUST00000103220 Gm7579A0A1B0GRJ4 243 aa1.92□□□□□ -2.1
Snrnp200-201ENSMUST00000103220 Krtap5-5Q2TA51 241 aa1.92□□□□□ -2.1
Snrnp200-201ENSMUST00000103220 Krtap5-4Q62220 223 aa1.92□□□□□ -2.1
Snrnp200-201ENSMUST00000103220 Gm45337A0A1B0GS71 263 aa1.9□□□□□ -2.1
Snrnp200-201ENSMUST00000103220 1110025L11RikO09048 78 aa1.9□□□□□ -2.11
Snrnp200-201ENSMUST00000103220 Krtap6-5Q925H3 78 aa1.9□□□□□ -2.11
Snrnp200-201ENSMUST00000103220 NebE9Q1W3 7152 aa1.89□□□□□ -2.11
Snrnp200-201ENSMUST00000103220 Gm11568A2A4M2 211 aa1.88□□□□□ -2.11
Snrnp200-201ENSMUST00000103220 Gm39115A0A1B0GSH7 232 aa1.84□□□□□ -2.11
Snrnp200-201ENSMUST00000103220 AhnakE9Q616 5656 aaKnown RBP1.84□□□□□ -2.11
Snrnp200-201ENSMUST00000103220 Gm10229O08631 77 aa1.83□□□□□ -2.12
Snrnp200-201ENSMUST00000103220 Gm2431E9Q8S1 172 aa1.8□□□□□ -2.12
Snrnp200-201ENSMUST00000103220 Gm45618A0A1B0GSA0 219 aa1.78□□□□□ -2.13
Snrnp200-201ENSMUST00000103220 A0A1Y7VJH8 109 aa1.76□□□□□ -2.13
Snrnp200-201ENSMUST00000103220 Gm10153A0A1B0GRL1 320 aa1.74□□□□□ -2.13
Snrnp200-201ENSMUST00000103220 Phgr1Q8K0G7 91 aa1.72□□□□□ -2.13
Snrnp200-201ENSMUST00000103220 Muc19Q6PZE0 7524 aa1.65□□□□□ -2.14
Snrnp200-201ENSMUST00000103220 Gm29735A0A1B0GT06 219 aa1.46□□□□□ -2.18
Snrnp200-201ENSMUST00000103220 Krtap6-2O08884 159 aa1.46□□□□□ -2.18
Snrnp200-201ENSMUST00000103220 Gm11567Q9D141 195 aa1.43□□□□□ -2.18
Snrnp200-201ENSMUST00000103220 Krtap21-1Q925H4 128 aa1.29□□□□□ -2.2
Snrnp200-201ENSMUST00000103220 A0A1Y7VLE6 161 aa1.17□□□□□ -2.22
Snrnp200-201ENSMUST00000103220 Krtap5-1Q64507 230 aa0.97□□□□□ -2.25
Snrnp200-201ENSMUST00000103220 A0A286YCP9 139 aa0.85□□□□□ -2.27
Snrnp200-201ENSMUST00000103220 A030003K21RikA0A1Y7VIM3 128 aa0.81□□□□□ -2.28
Snrnp200-201ENSMUST00000103220 Krtap28-10A0A1Y7VP58 119 aa0.8□□□□□ -2.28
Snrnp200-201ENSMUST00000103220 A0A1Y7VJ07 166 aa0.79□□□□□ -2.28
Snrnp200-201ENSMUST00000103220 Gm6217A0A1Y7VJK9 128 aa0.78□□□□□ -2.28
Snrnp200-201ENSMUST00000103220 Gm4559A4IF42 199 aa0.77□□□□□ -2.29
Snrnp200-201ENSMUST00000103220 A030014E15RikA0A1Y7VJV2 120 aa0.7□□□□□ -2.3
Snrnp200-201ENSMUST00000103220 A030005K14RikA0A1Y7VNY1 122 aa0.69□□□□□ -2.3
Snrnp200-201ENSMUST00000103220 Krtap28-13A0A087WQP5 138 aa0.68□□□□□ -2.3
Snrnp200-201ENSMUST00000103220 Gm7544A0A1Y7VJ58 118 aa0.62□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 121.4 ms