RNA–Protein interactions for RNA: ENSMUST00000102823.9

Ttc39b-203, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ttc39b, Length 8,831 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-203ENSMUST00000102823 Syne1Q6ZWR6 8799 aa3.01□□□□□ -1.93
Ttc39b-203ENSMUST00000102823 Krtap4-1Q3UUY3 169 aa3□□□□□ -1.93
Ttc39b-203ENSMUST00000102823 Fsip2A2ARZ3 6995 aa2.99□□□□□ -1.93
Ttc39b-203ENSMUST00000102823 Lce1a2Q9D1K4 149 aa2.98□□□□□ -1.93
Ttc39b-203ENSMUST00000102823 A0A1Y7VLE6 161 aa2.98□□□□□ -1.93
Ttc39b-203ENSMUST00000102823 Gm10024A0A0A0MQA4 119 aa2.98□□□□□ -1.93
Ttc39b-203ENSMUST00000102823 Gm11564A2A4L9 201 aa2.97□□□□□ -1.93
Ttc39b-203ENSMUST00000102823 Gm11563B1AQ90 168 aa2.97□□□□□ -1.93
Ttc39b-203ENSMUST00000102823 Gm11595B1AQA7 289 aa2.97□□□□□ -1.93
Ttc39b-203ENSMUST00000102823 Krtap4-8B1AQA8 209 aa2.97□□□□□ -1.93
Ttc39b-203ENSMUST00000102823 Syne2Q6ZWQ0 6874 aaKnown RBP2.96□□□□□ -1.94
Ttc39b-203ENSMUST00000102823 Krtap4-9B1AQA9 244 aa2.94□□□□□ -1.94
Ttc39b-203ENSMUST00000102823 Krtap4-7Q9D732 168 aa2.92□□□□□ -1.94
Ttc39b-203ENSMUST00000102823 Sprr2dO70555 85 aa2.89□□□□□ -1.95
Ttc39b-203ENSMUST00000102823 2300003K06RikA2A4M0 262 aa2.88□□□□□ -1.95
Ttc39b-203ENSMUST00000102823 Gm11938Q9D3H4 131 aa2.87□□□□□ -1.95
Ttc39b-203ENSMUST00000102823 Krtap4-13Q9D7P3 165 aa2.84□□□□□ -1.95
Ttc39b-203ENSMUST00000102823 Sprr2hO70559 108 aa2.83□□□□□ -1.96
Ttc39b-203ENSMUST00000102823 Krtap6-3A0A087WQL6 57 aa2.83□□□□□ -1.96
Ttc39b-203ENSMUST00000102823 A030003K21RikA0A1Y7VIM3 128 aa2.78□□□□□ -1.96
Ttc39b-203ENSMUST00000102823 Lce1kJ3QP15 125 aa2.76□□□□□ -1.97
Ttc39b-203ENSMUST00000102823 Mt3P28184 68 aa2.75□□□□□ -1.97
Ttc39b-203ENSMUST00000102823 Lce1a1Q9CQH5 143 aa2.73□□□□□ -1.97
Ttc39b-203ENSMUST00000102823 Hmcn2A2AJ76 5100 aa2.73□□□□□ -1.97
Ttc39b-203ENSMUST00000102823 SspoQ8CG65 4998 aa2.71□□□□□ -1.98
Ttc39b-203ENSMUST00000102823 Macf1Q9QXZ0 7354 aaKnown RBP2.67□□□□□ -1.98
Ttc39b-203ENSMUST00000102823 ObscnA2AAJ9 8891 aaKnown RBP2.66□□□□□ -1.98
Ttc39b-203ENSMUST00000102823 Mt1P02802 61 aaKnown RBP2.64□□□□□ -1.99
Ttc39b-203ENSMUST00000102823 Gm11555B1AQ89 175 aa2.62□□□□□ -1.99
Ttc39b-203ENSMUST00000102823 Eppk1Q8R0W0 6548 aa2.6□□□□□ -1.99
Ttc39b-203ENSMUST00000102823 Muc16A0A140LJ72 8478 aa2.6□□□□□ -1.99
Ttc39b-203ENSMUST00000102823 Krtap17-1A2A5X6 109 aa2.59□□□□□ -1.99
Ttc39b-203ENSMUST00000102823 A030005K14RikA0A1Y7VNY1 122 aa2.58□□□□□ -2
Ttc39b-203ENSMUST00000102823 Krtap20-2E9Q0A8 60 aa2.57□□□□□ -2
Ttc39b-203ENSMUST00000102823 Gm6217A0A1Y7VJK9 128 aa2.56□□□□□ -2
Ttc39b-203ENSMUST00000102823 Krtap28-10A0A1Y7VP58 119 aa2.55□□□□□ -2
Ttc39b-203ENSMUST00000102823 Krtap31-1Q9D644 177 aa2.55□□□□□ -2
Ttc39b-203ENSMUST00000102823 Gm11554B1AQB2 190 aa2.49□□□□□ -2.01
Ttc39b-203ENSMUST00000102823 A0A1Y7VJ07 166 aa2.45□□□□□ -2.02
Ttc39b-203ENSMUST00000102823 A030005L19RikA0A1Y7VIU2 113 aa2.45□□□□□ -2.02
Ttc39b-203ENSMUST00000102823 Sprr2bO70554 98 aa2.41□□□□□ -2.02
Ttc39b-203ENSMUST00000102823 DstQ91ZU6 7393 aaKnown RBP2.38□□□□□ -2.03
Ttc39b-203ENSMUST00000102823 NebE9Q1W3 7152 aa2.36□□□□□ -2.03
Ttc39b-203ENSMUST00000102823 Krtap28-13A0A087WQP5 138 aa2.35□□□□□ -2.03
Ttc39b-203ENSMUST00000102823 Gm11639A0A1D5RLM8 5808 aa2.32□□□□□ -2.04
Ttc39b-203ENSMUST00000102823 A0A1Y7VJH8 109 aa2.32□□□□□ -2.04
Ttc39b-203ENSMUST00000102823 Gm7544A0A1Y7VJ58 118 aa2.3□□□□□ -2.04
Ttc39b-203ENSMUST00000102823 Muc19Q6PZE0 7524 aa2.26□□□□□ -2.05
Ttc39b-203ENSMUST00000102823 Gpr98Q8VHN7 6298 aaKnown RBP2.22□□□□□ -2.05
Ttc39b-203ENSMUST00000102823 Gm11559Q9D3H7 191 aa2.17□□□□□ -2.06
Ttc39b-203ENSMUST00000102823 Kmt2dQ6PDK2 5588 aa2.16□□□□□ -2.06
Ttc39b-203ENSMUST00000102823 Krtap31-2Q8CAY5 177 aa2.15□□□□□ -2.07
Ttc39b-203ENSMUST00000102823 Krtap4-16Q91W93 202 aa2.15□□□□□ -2.07
Ttc39b-203ENSMUST00000102823 Krtap5-2Q9D5Z7 189 aa2.12□□□□□ -2.07
Ttc39b-203ENSMUST00000102823 1110025L11RikO09048 78 aa2.11□□□□□ -2.07
Ttc39b-203ENSMUST00000102823 Krtap6-5Q925H3 78 aa2.11□□□□□ -2.07
Ttc39b-203ENSMUST00000102823 A030014E15RikA0A1Y7VJV2 120 aa2.08□□□□□ -2.08
Ttc39b-203ENSMUST00000102823 Gm11568A2A4M2 211 aa2.07□□□□□ -2.08
Ttc39b-203ENSMUST00000102823 Krtap9-1Q64526 186 aa2.07□□□□□ -2.08
Ttc39b-203ENSMUST00000102823 Gm4553A0A1B0GSA9 284 aa2□□□□□ -2.09
Ttc39b-203ENSMUST00000102823 Hmcn1D3YXG0 5634 aa2□□□□□ -2.09
Ttc39b-203ENSMUST00000102823 Gm10229O08631 77 aa1.98□□□□□ -2.09
Ttc39b-203ENSMUST00000102823 A0A286YCP9 139 aa1.86□□□□□ -2.11
Ttc39b-203ENSMUST00000102823 AhnakE9Q616 5656 aaKnown RBP1.86□□□□□ -2.11
Ttc39b-203ENSMUST00000102823 Gm10153A0A1B0GRL1 320 aa1.8□□□□□ -2.12
Ttc39b-203ENSMUST00000102823 Gm45337A0A1B0GS71 263 aa1.79□□□□□ -2.12
Ttc39b-203ENSMUST00000102823 Gm2431E9Q8S1 172 aa1.78□□□□□ -2.12
Ttc39b-203ENSMUST00000102823 Gm40460A0A1B0GR10 244 aa1.74□□□□□ -2.13
Ttc39b-203ENSMUST00000102823 Gm7579A0A1B0GRJ4 243 aa1.74□□□□□ -2.13
Ttc39b-203ENSMUST00000102823 Krtap5-5Q2TA51 241 aa1.74□□□□□ -2.13
Ttc39b-203ENSMUST00000102823 Krtap5-4Q62220 223 aa1.74□□□□□ -2.13
Ttc39b-203ENSMUST00000102823 Gm39115A0A1B0GSH7 232 aa1.74□□□□□ -2.13
Ttc39b-203ENSMUST00000102823 Phgr1Q8K0G7 91 aa1.66□□□□□ -2.14
Ttc39b-203ENSMUST00000102823 Krtap6-2O08884 159 aa1.64□□□□□ -2.15
Ttc39b-203ENSMUST00000102823 Gm45618A0A1B0GSA0 219 aa1.54□□□□□ -2.16
Ttc39b-203ENSMUST00000102823 Krtap21-1Q925H4 128 aa1.51□□□□□ -2.17
Ttc39b-203ENSMUST00000102823 Gm29735A0A1B0GT06 219 aa1.35□□□□□ -2.19
Ttc39b-203ENSMUST00000102823 Gm11567Q9D141 195 aa1.32□□□□□ -2.2
Ttc39b-203ENSMUST00000102823 Krtap5-1Q64507 230 aa0.99□□□□□ -2.25
Ttc39b-203ENSMUST00000102823 Gm4559A4IF42 199 aa0.72□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 96.3 ms