RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Gm11564A2A4L9 201 aa3.97□□□□□ -1.77
Vamp1-203ENSMUST00000100942 Gm11563B1AQ90 168 aa3.97□□□□□ -1.77
Vamp1-203ENSMUST00000100942 Gm11595B1AQA7 289 aa3.97□□□□□ -1.77
Vamp1-203ENSMUST00000100942 Krtap4-8B1AQA8 209 aa3.97□□□□□ -1.77
Vamp1-203ENSMUST00000100942 Lce3bQ9CQM7 98 aa3.95□□□□□ -1.78
Vamp1-203ENSMUST00000100942 Mt4P47945 62 aa3.92□□□□□ -1.78
Vamp1-203ENSMUST00000100942 Fsip2A2ARZ3 6995 aa3.91□□□□□ -1.78
Vamp1-203ENSMUST00000100942 A030005L19RikA0A1Y7VIU2 113 aa3.9□□□□□ -1.78
Vamp1-203ENSMUST00000100942 Muc16A0A140LJ72 8478 aa3.9□□□□□ -1.78
Vamp1-203ENSMUST00000100942 Lce1bQ9D149 137 aa3.9□□□□□ -1.79
Vamp1-203ENSMUST00000100942 Gm10142J3KMP7 120 aa3.89□□□□□ -1.79
Vamp1-203ENSMUST00000100942 Krtap19-4Q925H7 84 aa3.88□□□□□ -1.79
Vamp1-203ENSMUST00000100942 Krtap4-9B1AQA9 244 aa3.88□□□□□ -1.79
Vamp1-203ENSMUST00000100942 Gm38119A0A0A6YX29 146 aa3.86□□□□□ -1.79
Vamp1-203ENSMUST00000100942 Sprr2fO70557 76 aa3.83□□□□□ -1.8
Vamp1-203ENSMUST00000100942 Lce3cQ91V05 98 aa3.83□□□□□ -1.8
Vamp1-203ENSMUST00000100942 Gm7544A0A1Y7VJ58 118 aa3.83□□□□□ -1.8
Vamp1-203ENSMUST00000100942 A0A1Y7VLE6 161 aa3.83□□□□□ -1.8
Vamp1-203ENSMUST00000100942 Lce3dE9Q8V1 98 aa3.79□□□□□ -1.8
Vamp1-203ENSMUST00000100942 Sprr2eO70556 76 aa3.79□□□□□ -1.8
Vamp1-203ENSMUST00000100942 A030005K14RikA0A1Y7VNY1 122 aa3.75□□□□□ -1.81
Vamp1-203ENSMUST00000100942 Sprr2kO70562 68 aa3.74□□□□□ -1.81
Vamp1-203ENSMUST00000100942 Krtap4-13Q9D7P3 165 aa3.74□□□□□ -1.81
Vamp1-203ENSMUST00000100942 Krtap28-13A0A087WQP5 138 aa3.74□□□□□ -1.81
Vamp1-203ENSMUST00000100942 Sprr2hO70559 108 aa3.73□□□□□ -1.81
Vamp1-203ENSMUST00000100942 2300003K06RikA2A4M0 262 aa3.73□□□□□ -1.81
Vamp1-203ENSMUST00000100942 Krtap4-16Q91W93 202 aa3.69□□□□□ -1.82
Vamp1-203ENSMUST00000100942 Lce3eF8VQJ0 98 aa3.66□□□□□ -1.82
Vamp1-203ENSMUST00000100942 Lce3fQ6PAI4 98 aa3.66□□□□□ -1.82
Vamp1-203ENSMUST00000100942 ObscnA2AAJ9 8891 aaKnown RBP3.65□□□□□ -1.82
Vamp1-203ENSMUST00000100942 Lce3aQ497I5 98 aa3.62□□□□□ -1.83
Vamp1-203ENSMUST00000100942 Krtap4-7Q9D732 168 aa3.6□□□□□ -1.83
Vamp1-203ENSMUST00000100942 Lce1kJ3QP15 125 aa3.59□□□□□ -1.83
Vamp1-203ENSMUST00000100942 Mt1P02802 61 aaKnown RBP3.56□□□□□ -1.84
Vamp1-203ENSMUST00000100942 Lce1lQ9D1G7 135 aa3.53□□□□□ -1.84
Vamp1-203ENSMUST00000100942 Gm11568A2A4M2 211 aa3.49□□□□□ -1.85
Vamp1-203ENSMUST00000100942 Krtap9-1Q64526 186 aa3.49□□□□□ -1.85
Vamp1-203ENSMUST00000100942 Krtap20-2E9Q0A8 60 aa3.45□□□□□ -1.86
Vamp1-203ENSMUST00000100942 Krtap5-2Q9D5Z7 189 aa3.44□□□□□ -1.86
Vamp1-203ENSMUST00000100942 Krtap6-3A0A087WQL6 57 aa3.44□□□□□ -1.86
Vamp1-203ENSMUST00000100942 Macf1Q9QXZ0 7354 aaKnown RBP3.4□□□□□ -1.87
Vamp1-203ENSMUST00000100942 A030003K21RikA0A1Y7VIM3 128 aa3.31□□□□□ -1.88
Vamp1-203ENSMUST00000100942 Gm6217A0A1Y7VJK9 128 aa3.31□□□□□ -1.88
Vamp1-203ENSMUST00000100942 Gm10153A0A1B0GRL1 320 aa3.3□□□□□ -1.88
Vamp1-203ENSMUST00000100942 Muc19Q6PZE0 7524 aa3.2□□□□□ -1.9
Vamp1-203ENSMUST00000100942 Gm10024A0A0A0MQA4 119 aa3.17□□□□□ -1.9
Vamp1-203ENSMUST00000100942 A0A286YCP9 139 aa3.17□□□□□ -1.9
Vamp1-203ENSMUST00000100942 Gm4553A0A1B0GSA9 284 aa3.16□□□□□ -1.9
Vamp1-203ENSMUST00000100942 Gm45337A0A1B0GS71 263 aa3.15□□□□□ -1.91
Vamp1-203ENSMUST00000100942 Mt3P28184 68 aa3.15□□□□□ -1.91
Vamp1-203ENSMUST00000100942 Gm11559Q9D3H7 191 aa3.14□□□□□ -1.91
Vamp1-203ENSMUST00000100942 Kmt2dQ6PDK2 5588 aa3.13□□□□□ -1.91
Vamp1-203ENSMUST00000100942 A0A1Y7VJ07 166 aa3.13□□□□□ -1.91
Vamp1-203ENSMUST00000100942 Gm2431E9Q8S1 172 aa3.07□□□□□ -1.92
Vamp1-203ENSMUST00000100942 Hmcn1D3YXG0 5634 aa3.07□□□□□ -1.92
Vamp1-203ENSMUST00000100942 Gm40460A0A1B0GR10 244 aa3.06□□□□□ -1.92
Vamp1-203ENSMUST00000100942 Gm7579A0A1B0GRJ4 243 aa3.06□□□□□ -1.92
Vamp1-203ENSMUST00000100942 Krtap5-5Q2TA51 241 aa3.06□□□□□ -1.92
Vamp1-203ENSMUST00000100942 Krtap5-4Q62220 223 aa3.06□□□□□ -1.92
Vamp1-203ENSMUST00000100942 Gm11554B1AQB2 190 aa3.02□□□□□ -1.93
Vamp1-203ENSMUST00000100942 A030014E15RikA0A1Y7VJV2 120 aa2.98□□□□□ -1.93
Vamp1-203ENSMUST00000100942 DstQ91ZU6 7393 aaKnown RBP2.95□□□□□ -1.94
Vamp1-203ENSMUST00000100942 NebE9Q1W3 7152 aa2.84□□□□□ -1.96
Vamp1-203ENSMUST00000100942 Gm39115A0A1B0GSH7 232 aa2.83□□□□□ -1.96
Vamp1-203ENSMUST00000100942 1110025L11RikO09048 78 aa2.7□□□□□ -1.98
Vamp1-203ENSMUST00000100942 Krtap6-5Q925H3 78 aa2.7□□□□□ -1.98
Vamp1-203ENSMUST00000100942 Eppk1Q8R0W0 6548 aa2.69□□□□□ -1.98
Vamp1-203ENSMUST00000100942 Gm11639A0A1D5RLM8 5808 aa2.66□□□□□ -1.98
Vamp1-203ENSMUST00000100942 AhnakE9Q616 5656 aaKnown RBP2.54□□□□□ -2
Vamp1-203ENSMUST00000100942 Sprr2bO70554 98 aa2.5□□□□□ -2.01
Vamp1-203ENSMUST00000100942 Gpr98Q8VHN7 6298 aaKnown RBP2.45□□□□□ -2.02
Vamp1-203ENSMUST00000100942 Gm45618A0A1B0GSA0 219 aa2.43□□□□□ -2.02
Vamp1-203ENSMUST00000100942 Gm10229O08631 77 aa2.39□□□□□ -2.03
Vamp1-203ENSMUST00000100942 Gm11567Q9D141 195 aa2.33□□□□□ -2.04
Vamp1-203ENSMUST00000100942 Gm29735A0A1B0GT06 219 aa2.31□□□□□ -2.04
Vamp1-203ENSMUST00000100942 Krtap21-1Q925H4 128 aa2.22□□□□□ -2.05
Vamp1-203ENSMUST00000100942 Phgr1Q8K0G7 91 aa2.22□□□□□ -2.05
Vamp1-203ENSMUST00000100942 Krtap6-2O08884 159 aa2.02□□□□□ -2.09
Vamp1-203ENSMUST00000100942 Krtap5-1Q64507 230 aa1.55□□□□□ -2.16
Vamp1-203ENSMUST00000100942 Gm4559A4IF42 199 aa1.43□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 6.2 ms