RNA–Protein interactions for RNA: ENSMUST00000100640.4

Sqle-202, Transcript of Squalene monooxygenase, mousemouse

TSL 1 (best) BASIC

Gene Sqle, Length 2,636 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqle-202ENSMUST00000100640 Gm7544A0A1Y7VJ58 118 aa4.19□□□□□ -1.74
Sqle-202ENSMUST00000100640 Lce1cQ9D1C5 147 aa4.12□□□□□ -1.75
Sqle-202ENSMUST00000100640 A030014E15RikA0A1Y7VJV2 120 aa4.12□□□□□ -1.75
Sqle-202ENSMUST00000100640 Gm11564A2A4L9 201 aa4.05□□□□□ -1.76
Sqle-202ENSMUST00000100640 Gm11595B1AQA7 289 aa4.05□□□□□ -1.76
Sqle-202ENSMUST00000100640 Krtap4-8B1AQA8 209 aa4.05□□□□□ -1.76
Sqle-202ENSMUST00000100640 Gm10100J3QK64 120 aa4.04□□□□□ -1.76
Sqle-202ENSMUST00000100640 Krtap22-2J3QNX6 67 aa4.04□□□□□ -1.76
Sqle-202ENSMUST00000100640 Gm38119A0A0A6YX29 146 aa3.99□□□□□ -1.77
Sqle-202ENSMUST00000100640 Lce1fB9EJP6 147 aa3.98□□□□□ -1.77
Sqle-202ENSMUST00000100640 Lce1a1Q9CQH5 143 aa3.98□□□□□ -1.77
Sqle-202ENSMUST00000100640 Lce3bQ9CQM7 98 aa3.98□□□□□ -1.77
Sqle-202ENSMUST00000100640 Gm10142J3KMP7 120 aa3.97□□□□□ -1.77
Sqle-202ENSMUST00000100640 Sprr2iO70560 76 aa3.96□□□□□ -1.77
Sqle-202ENSMUST00000100640 Krtap19-4Q925H7 84 aa3.96□□□□□ -1.78
Sqle-202ENSMUST00000100640 Krtap4-9B1AQA9 244 aa3.94□□□□□ -1.78
Sqle-202ENSMUST00000100640 Mt4P47945 62 aa3.91□□□□□ -1.78
Sqle-202ENSMUST00000100640 Fsip2A2ARZ3 6995 aa3.9□□□□□ -1.79
Sqle-202ENSMUST00000100640 Lce3cQ91V05 98 aa3.85□□□□□ -1.79
Sqle-202ENSMUST00000100640 Lce3dE9Q8V1 98 aa3.83□□□□□ -1.8
Sqle-202ENSMUST00000100640 Sprr2hO70559 108 aa3.8□□□□□ -1.8
Sqle-202ENSMUST00000100640 Krtap4-13Q9D7P3 165 aa3.8□□□□□ -1.8
Sqle-202ENSMUST00000100640 Lce1bQ9D149 137 aa3.79□□□□□ -1.8
Sqle-202ENSMUST00000100640 Sprr2eO70556 76 aa3.76□□□□□ -1.81
Sqle-202ENSMUST00000100640 Sprr2fO70557 76 aa3.76□□□□□ -1.81
Sqle-202ENSMUST00000100640 Lce3eF8VQJ0 98 aa3.74□□□□□ -1.81
Sqle-202ENSMUST00000100640 Lce3fQ6PAI4 98 aa3.74□□□□□ -1.81
Sqle-202ENSMUST00000100640 Syne1Q6ZWR6 8799 aa3.71□□□□□ -1.81
Sqle-202ENSMUST00000100640 Sprr2kO70562 68 aa3.7□□□□□ -1.82
Sqle-202ENSMUST00000100640 2300003K06RikA2A4M0 262 aa3.7□□□□□ -1.82
Sqle-202ENSMUST00000100640 Lce3aQ497I5 98 aa3.69□□□□□ -1.82
Sqle-202ENSMUST00000100640 Krtap6-3A0A087WQL6 57 aa3.67□□□□□ -1.82
Sqle-202ENSMUST00000100640 A030003K21RikA0A1Y7VIM3 128 aa3.64□□□□□ -1.83
Sqle-202ENSMUST00000100640 Lce1lQ9D1G7 135 aa3.6□□□□□ -1.83
Sqle-202ENSMUST00000100640 Krtap4-16Q91W93 202 aa3.55□□□□□ -1.84
Sqle-202ENSMUST00000100640 ObscnA2AAJ9 8891 aaKnown RBP3.52□□□□□ -1.85
Sqle-202ENSMUST00000100640 Gm6217A0A1Y7VJK9 128 aa3.47□□□□□ -1.85
Sqle-202ENSMUST00000100640 Krtap20-2E9Q0A8 60 aa3.38□□□□□ -1.87
Sqle-202ENSMUST00000100640 A0A286YCP9 139 aa3.36□□□□□ -1.87
Sqle-202ENSMUST00000100640 Lce1kJ3QP15 125 aa3.35□□□□□ -1.87
Sqle-202ENSMUST00000100640 Krtap5-2Q9D5Z7 189 aa3.31□□□□□ -1.88
Sqle-202ENSMUST00000100640 Mt1P02802 61 aaKnown RBP3.27□□□□□ -1.89
Sqle-202ENSMUST00000100640 Gm11568A2A4M2 211 aa3.25□□□□□ -1.89
Sqle-202ENSMUST00000100640 Krtap9-1Q64526 186 aa3.25□□□□□ -1.89
Sqle-202ENSMUST00000100640 Gm11559Q9D3H7 191 aa3.23□□□□□ -1.89
Sqle-202ENSMUST00000100640 Macf1Q9QXZ0 7354 aaKnown RBP3.21□□□□□ -1.9
Sqle-202ENSMUST00000100640 Gm10024A0A0A0MQA4 119 aa3.18□□□□□ -1.9
Sqle-202ENSMUST00000100640 Gm4553A0A1B0GSA9 284 aa3.12□□□□□ -1.91
Sqle-202ENSMUST00000100640 Gpr98Q8VHN7 6298 aaKnown RBP3.11□□□□□ -1.91
Sqle-202ENSMUST00000100640 Gm11554B1AQB2 190 aa3.1□□□□□ -1.91
Sqle-202ENSMUST00000100640 Gm2431E9Q8S1 172 aa3.04□□□□□ -1.92
Sqle-202ENSMUST00000100640 Gm10153A0A1B0GRL1 320 aa3.03□□□□□ -1.92
Sqle-202ENSMUST00000100640 Muc16A0A140LJ72 8478 aa3.03□□□□□ -1.92
Sqle-202ENSMUST00000100640 Gm45337A0A1B0GS71 263 aa3.03□□□□□ -1.93
Sqle-202ENSMUST00000100640 Kmt2dQ6PDK2 5588 aa2.99□□□□□ -1.93
Sqle-202ENSMUST00000100640 Eppk1Q8R0W0 6548 aa2.96□□□□□ -1.94
Sqle-202ENSMUST00000100640 Hmcn1D3YXG0 5634 aa2.92□□□□□ -1.94
Sqle-202ENSMUST00000100640 Gm40460A0A1B0GR10 244 aa2.92□□□□□ -1.94
Sqle-202ENSMUST00000100640 Gm7579A0A1B0GRJ4 243 aa2.92□□□□□ -1.94
Sqle-202ENSMUST00000100640 Krtap5-5Q2TA51 241 aa2.92□□□□□ -1.94
Sqle-202ENSMUST00000100640 Krtap5-4Q62220 223 aa2.92□□□□□ -1.94
Sqle-202ENSMUST00000100640 Mt3P28184 68 aa2.85□□□□□ -1.95
Sqle-202ENSMUST00000100640 Muc19Q6PZE0 7524 aa2.84□□□□□ -1.95
Sqle-202ENSMUST00000100640 Gm39115A0A1B0GSH7 232 aa2.81□□□□□ -1.96
Sqle-202ENSMUST00000100640 Gm45618A0A1B0GSA0 219 aa2.8□□□□□ -1.96
Sqle-202ENSMUST00000100640 Gm11639A0A1D5RLM8 5808 aa2.79□□□□□ -1.96
Sqle-202ENSMUST00000100640 DstQ91ZU6 7393 aaKnown RBP2.74□□□□□ -1.97
Sqle-202ENSMUST00000100640 Gm11567Q9D141 195 aa2.7□□□□□ -1.98
Sqle-202ENSMUST00000100640 NebE9Q1W3 7152 aa2.69□□□□□ -1.98
Sqle-202ENSMUST00000100640 Gm29735A0A1B0GT06 219 aa2.67□□□□□ -1.98
Sqle-202ENSMUST00000100640 1110025L11RikO09048 78 aa2.58□□□□□ -2
Sqle-202ENSMUST00000100640 Krtap6-5Q925H3 78 aa2.58□□□□□ -2
Sqle-202ENSMUST00000100640 AhnakE9Q616 5656 aaKnown RBP2.54□□□□□ -2
Sqle-202ENSMUST00000100640 Sprr2bO70554 98 aa2.48□□□□□ -2.01
Sqle-202ENSMUST00000100640 Gm10229O08631 77 aa2.27□□□□□ -2.05
Sqle-202ENSMUST00000100640 Phgr1Q8K0G7 91 aa2.23□□□□□ -2.05
Sqle-202ENSMUST00000100640 Krtap21-1Q925H4 128 aa2.13□□□□□ -2.07
Sqle-202ENSMUST00000100640 Krtap6-2O08884 159 aa1.87□□□□□ -2.11
Sqle-202ENSMUST00000100640 Krtap5-1Q64507 230 aa1.85□□□□□ -2.11
Sqle-202ENSMUST00000100640 Gm4559A4IF42 199 aa1.76□□□□□ -2.13
Retrieved 80 of 22,080 RNA–protein pairs in 122.6 ms