RNA–Protein interactions for RNA: ENSMUST00000088973.10

Smarca1-202, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-202ENSMUST00000088973 Fat4Q2PZL6 4981 aa3.26□□□□□ -1.89
Smarca1-202ENSMUST00000088973 Gm10024A0A0A0MQA4 119 aa3.25□□□□□ -1.89
Smarca1-202ENSMUST00000088973 Krtap19-4Q925H7 84 aa3.22□□□□□ -1.89
Smarca1-202ENSMUST00000088973 Mt4P47945 62 aa3.2□□□□□ -1.9
Smarca1-202ENSMUST00000088973 Lce1a2Q9D1K4 149 aa3.2□□□□□ -1.9
Smarca1-202ENSMUST00000088973 Krtap4-6Q3V4B7 195 aa3.16□□□□□ -1.9
Smarca1-202ENSMUST00000088973 ZanO88799 5376 aa3.16□□□□□ -1.9
Smarca1-202ENSMUST00000088973 Pkhd1l1Q80ZA4 4249 aa3.15□□□□□ -1.9
Smarca1-202ENSMUST00000088973 Sprr2fO70557 76 aa3.14□□□□□ -1.91
Smarca1-202ENSMUST00000088973 Krtap4-2B1AQ85 167 aa3.13□□□□□ -1.91
Smarca1-202ENSMUST00000088973 Fsip2A2ARZ3 6995 aa3.12□□□□□ -1.91
Smarca1-202ENSMUST00000088973 Ush2AQ2QI47 5193 aa3.06□□□□□ -1.92
Smarca1-202ENSMUST00000088973 Krtap17-1A2A5X6 109 aa3.06□□□□□ -1.92
Smarca1-202ENSMUST00000088973 Hmcn2A2AJ76 5100 aa3.05□□□□□ -1.92
Smarca1-202ENSMUST00000088973 A030014E15RikA0A1Y7VJV2 120 aa3.02□□□□□ -1.93
Smarca1-202ENSMUST00000088973 Krtap4-1Q3UUY3 169 aa3.02□□□□□ -1.93
Smarca1-202ENSMUST00000088973 Muc5bE9Q5I3 4800 aa3.01□□□□□ -1.93
Smarca1-202ENSMUST00000088973 ObscnA2AAJ9 8891 aaKnown RBP3.01□□□□□ -1.93
Smarca1-202ENSMUST00000088973 Krtap4-9B1AQA9 244 aa2.97□□□□□ -1.93
Smarca1-202ENSMUST00000088973 Syne2Q6ZWQ0 6874 aaKnown RBP2.96□□□□□ -1.94
Smarca1-202ENSMUST00000088973 2300003K06RikA2A4M0 262 aa2.96□□□□□ -1.94
Smarca1-202ENSMUST00000088973 Sprr2dO70555 85 aa2.95□□□□□ -1.94
Smarca1-202ENSMUST00000088973 Gm11564A2A4L9 201 aa2.95□□□□□ -1.94
Smarca1-202ENSMUST00000088973 Gm11563B1AQ90 168 aa2.95□□□□□ -1.94
Smarca1-202ENSMUST00000088973 Gm11595B1AQA7 289 aa2.95□□□□□ -1.94
Smarca1-202ENSMUST00000088973 Krtap4-8B1AQA8 209 aa2.95□□□□□ -1.94
Smarca1-202ENSMUST00000088973 Gm11596B1AQB0 205 aa2.94□□□□□ -1.94
Smarca1-202ENSMUST00000088973 Macf1Q9QXZ0 7354 aaKnown RBP2.94□□□□□ -1.94
Smarca1-202ENSMUST00000088973 Krtap31-1Q9D644 177 aa2.93□□□□□ -1.94
Smarca1-202ENSMUST00000088973 Sprr2hO70559 108 aa2.93□□□□□ -1.94
Smarca1-202ENSMUST00000088973 Gm11938Q9D3H4 131 aa2.93□□□□□ -1.94
Smarca1-202ENSMUST00000088973 Gm11562A0PK51 136 aa2.92□□□□□ -1.94
Smarca1-202ENSMUST00000088973 Krtap4-7Q9D732 168 aa2.92□□□□□ -1.94
Smarca1-202ENSMUST00000088973 Krtap4-13Q9D7P3 165 aa2.89□□□□□ -1.95
Smarca1-202ENSMUST00000088973 Lce1kJ3QP15 125 aa2.88□□□□□ -1.95
Smarca1-202ENSMUST00000088973 SspoQ8CG65 4998 aa2.86□□□□□ -1.95
Smarca1-202ENSMUST00000088973 A0A286YCP9 139 aa2.84□□□□□ -1.96
Smarca1-202ENSMUST00000088973 DstQ91ZU6 7393 aaKnown RBP2.75□□□□□ -1.97
Smarca1-202ENSMUST00000088973 Krtap4-16Q91W93 202 aa2.75□□□□□ -1.97
Smarca1-202ENSMUST00000088973 Mt3P28184 68 aa2.74□□□□□ -1.97
Smarca1-202ENSMUST00000088973 Lce1a1Q9CQH5 143 aa2.65□□□□□ -1.99
Smarca1-202ENSMUST00000088973 Gm11555B1AQ89 175 aa2.63□□□□□ -1.99
Smarca1-202ENSMUST00000088973 NebE9Q1W3 7152 aa2.61□□□□□ -1.99
Smarca1-202ENSMUST00000088973 Gm11554B1AQB2 190 aa2.61□□□□□ -1.99
Smarca1-202ENSMUST00000088973 Mt1P02802 61 aaKnown RBP2.57□□□□□ -2
Smarca1-202ENSMUST00000088973 Krtap6-3A0A087WQL6 57 aa2.56□□□□□ -2
Smarca1-202ENSMUST00000088973 Muc19Q6PZE0 7524 aa2.56□□□□□ -2
Smarca1-202ENSMUST00000088973 Krtap20-2E9Q0A8 60 aa2.54□□□□□ -2
Smarca1-202ENSMUST00000088973 Kmt2dQ6PDK2 5588 aa2.54□□□□□ -2
Smarca1-202ENSMUST00000088973 Sprr2bO70554 98 aa2.45□□□□□ -2.02
Smarca1-202ENSMUST00000088973 Eppk1Q8R0W0 6548 aa2.36□□□□□ -2.03
Smarca1-202ENSMUST00000088973 Gpr98Q8VHN7 6298 aaKnown RBP2.2□□□□□ -2.06
Smarca1-202ENSMUST00000088973 Krtap31-2Q8CAY5 177 aa2.18□□□□□ -2.06
Smarca1-202ENSMUST00000088973 Gm11639A0A1D5RLM8 5808 aa2.12□□□□□ -2.07
Smarca1-202ENSMUST00000088973 1110025L11RikO09048 78 aa2.11□□□□□ -2.07
Smarca1-202ENSMUST00000088973 Krtap6-5Q925H3 78 aa2.11□□□□□ -2.07
Smarca1-202ENSMUST00000088973 Gm11568A2A4M2 211 aa2.01□□□□□ -2.09
Smarca1-202ENSMUST00000088973 Krtap9-1Q64526 186 aa2.01□□□□□ -2.09
Smarca1-202ENSMUST00000088973 Hmcn1D3YXG0 5634 aa1.99□□□□□ -2.09
Smarca1-202ENSMUST00000088973 Gm10229O08631 77 aa1.99□□□□□ -2.09
Smarca1-202ENSMUST00000088973 Gm11559Q9D3H7 191 aa1.97□□□□□ -2.09
Smarca1-202ENSMUST00000088973 Phgr1Q8K0G7 91 aa1.88□□□□□ -2.11
Smarca1-202ENSMUST00000088973 Gm45618A0A1B0GSA0 219 aa1.8□□□□□ -2.12
Smarca1-202ENSMUST00000088973 Gm39115A0A1B0GSH7 232 aa1.78□□□□□ -2.12
Smarca1-202ENSMUST00000088973 Krtap5-2Q9D5Z7 189 aa1.77□□□□□ -2.13
Smarca1-202ENSMUST00000088973 AhnakE9Q616 5656 aaKnown RBP1.69□□□□□ -2.14
Smarca1-202ENSMUST00000088973 Gm4553A0A1B0GSA9 284 aa1.67□□□□□ -2.14
Smarca1-202ENSMUST00000088973 Krtap6-2O08884 159 aa1.62□□□□□ -2.15
Smarca1-202ENSMUST00000088973 Gm2431E9Q8S1 172 aa1.6□□□□□ -2.15
Smarca1-202ENSMUST00000088973 Gm29735A0A1B0GT06 219 aa1.6□□□□□ -2.15
Smarca1-202ENSMUST00000088973 Gm45337A0A1B0GS71 263 aa1.54□□□□□ -2.16
Smarca1-202ENSMUST00000088973 Gm10153A0A1B0GRL1 320 aa1.52□□□□□ -2.17
Smarca1-202ENSMUST00000088973 Krtap21-1Q925H4 128 aa1.51□□□□□ -2.17
Smarca1-202ENSMUST00000088973 Gm40460A0A1B0GR10 244 aa1.4□□□□□ -2.19
Smarca1-202ENSMUST00000088973 Gm7579A0A1B0GRJ4 243 aa1.4□□□□□ -2.19
Smarca1-202ENSMUST00000088973 Krtap5-5Q2TA51 241 aa1.4□□□□□ -2.19
Smarca1-202ENSMUST00000088973 Krtap5-4Q62220 223 aa1.4□□□□□ -2.19
Smarca1-202ENSMUST00000088973 Gm11567Q9D141 195 aa1.32□□□□□ -2.2
Smarca1-202ENSMUST00000088973 Krtap5-1Q64507 230 aa1.31□□□□□ -2.2
Smarca1-202ENSMUST00000088973 Gm4559A4IF42 199 aa1.1□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 143.5 ms