RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Gm39115A0A1B0GSH7 232 aa3.08□□□□□ -1.92
Trim40-201ENSMUST00000087158 Lce1a2Q9D1K4 149 aa3.07□□□□□ -1.92
Trim40-201ENSMUST00000087158 2300003K06RikA2A4M0 262 aa3.05□□□□□ -1.92
Trim40-201ENSMUST00000087158 Tnp1P10856 55 aa3.05□□□□□ -1.92
Trim40-201ENSMUST00000087158 Gm11564A2A4L9 201 aa3.05□□□□□ -1.92
Trim40-201ENSMUST00000087158 Gm11595B1AQA7 289 aa3.05□□□□□ -1.92
Trim40-201ENSMUST00000087158 Krtap4-8B1AQA8 209 aa3.05□□□□□ -1.92
Trim40-201ENSMUST00000087158 Krtap8-1O08633 61 aa3.05□□□□□ -1.92
Trim40-201ENSMUST00000087158 Gm10142J3KMP7 120 aa3.04□□□□□ -1.92
Trim40-201ENSMUST00000087158 Fsip2A2ARZ3 6995 aa3.02□□□□□ -1.93
Trim40-201ENSMUST00000087158 Krtap19-9bQ99NG9 58 aa3.01□□□□□ -1.93
Trim40-201ENSMUST00000087158 Gm6358A0A087WPH4 74 aa3.01□□□□□ -1.93
Trim40-201ENSMUST00000087158 Krtap4-9B1AQA9 244 aa2.96□□□□□ -1.93
Trim40-201ENSMUST00000087158 2310046K23RikA0A0A6YVW6 87 aa2.96□□□□□ -1.94
Trim40-201ENSMUST00000087158 Mt2P02798 61 aa2.95□□□□□ -1.94
Trim40-201ENSMUST00000087158 Lce1cQ9D1C5 147 aa2.94□□□□□ -1.94
Trim40-201ENSMUST00000087158 Lce1fB9EJP6 147 aa2.93□□□□□ -1.94
Trim40-201ENSMUST00000087158 Mt4P47945 62 aa2.92□□□□□ -1.94
Trim40-201ENSMUST00000087158 Gm11554B1AQB2 190 aa2.9□□□□□ -1.94
Trim40-201ENSMUST00000087158 Krtap4-13Q9D7P3 165 aa2.87□□□□□ -1.95
Trim40-201ENSMUST00000087158 Gm29735A0A1B0GT06 219 aa2.86□□□□□ -1.95
Trim40-201ENSMUST00000087158 Krtap9-3Q3V2C1 136 aa2.83□□□□□ -1.96
Trim40-201ENSMUST00000087158 Gm10272F7CZ33 110 aa2.83□□□□□ -1.96
Trim40-201ENSMUST00000087158 Mt3P28184 68 aa2.82□□□□□ -1.96
Trim40-201ENSMUST00000087158 Gpr98Q8VHN7 6298 aaKnown RBP2.8□□□□□ -1.96
Trim40-201ENSMUST00000087158 Krtap6-3A0A087WQL6 57 aa2.8□□□□□ -1.96
Trim40-201ENSMUST00000087158 Krtap22-2J3QNX6 67 aa2.8□□□□□ -1.96
Trim40-201ENSMUST00000087158 Gm2431E9Q8S1 172 aa2.78□□□□□ -1.96
Trim40-201ENSMUST00000087158 Sprr2kO70562 68 aa2.78□□□□□ -1.96
Trim40-201ENSMUST00000087158 Gm11567Q9D141 195 aa2.74□□□□□ -1.97
Trim40-201ENSMUST00000087158 Eppk1Q8R0W0 6548 aa2.68□□□□□ -1.98
Trim40-201ENSMUST00000087158 Sprr2gO70558 76 aa2.63□□□□□ -1.99
Trim40-201ENSMUST00000087158 Hmcn1D3YXG0 5634 aa2.62□□□□□ -1.99
Trim40-201ENSMUST00000087158 Krtap9-1Q64526 186 aa2.62□□□□□ -1.99
Trim40-201ENSMUST00000087158 4933428G20RikQ9D3X4 101 aa2.6□□□□□ -1.99
Trim40-201ENSMUST00000087158 Gm45337A0A1B0GS71 263 aa2.6□□□□□ -1.99
Trim40-201ENSMUST00000087158 Sprr2dO70555 85 aa2.58□□□□□ -2
Trim40-201ENSMUST00000087158 Gm11938Q9D3H4 131 aa2.58□□□□□ -2
Trim40-201ENSMUST00000087158 Gm11639A0A1D5RLM8 5808 aa2.54□□□□□ -2
Trim40-201ENSMUST00000087158 Krtap20-2E9Q0A8 60 aa2.54□□□□□ -2
Trim40-201ENSMUST00000087158 Macf1Q9QXZ0 7354 aaKnown RBP2.46□□□□□ -2.02
Trim40-201ENSMUST00000087158 Krtap5-1Q64507 230 aa2.46□□□□□ -2.02
Trim40-201ENSMUST00000087158 Krtap5-4Q62220 223 aa2.45□□□□□ -2.02
Trim40-201ENSMUST00000087158 Sprr2iO70560 76 aa2.45□□□□□ -2.02
Trim40-201ENSMUST00000087158 Lce3bQ9CQM7 98 aa2.44□□□□□ -2.02
Trim40-201ENSMUST00000087158 Syne1Q6ZWR6 8799 aa2.42□□□□□ -2.02
Trim40-201ENSMUST00000087158 Krtap19-4Q925H7 84 aa2.39□□□□□ -2.03
Trim40-201ENSMUST00000087158 DstQ91ZU6 7393 aaKnown RBP2.38□□□□□ -2.03
Trim40-201ENSMUST00000087158 Gm10153A0A1B0GRL1 320 aa2.36□□□□□ -2.03
Trim40-201ENSMUST00000087158 Gm4559A4IF42 199 aa2.36□□□□□ -2.03
Trim40-201ENSMUST00000087158 Gm11568A2A4M2 211 aa2.33□□□□□ -2.04
Trim40-201ENSMUST00000087158 Krtap5-2Q9D5Z7 189 aa2.33□□□□□ -2.04
Trim40-201ENSMUST00000087158 Muc19Q6PZE0 7524 aa2.3□□□□□ -2.04
Trim40-201ENSMUST00000087158 Lce3cQ91V05 98 aa2.3□□□□□ -2.04
Trim40-201ENSMUST00000087158 Sprr2fO70557 76 aa2.29□□□□□ -2.04
Trim40-201ENSMUST00000087158 Gm4553A0A1B0GSA9 284 aa2.28□□□□□ -2.04
Trim40-201ENSMUST00000087158 Lce3eF8VQJ0 98 aa2.27□□□□□ -2.05
Trim40-201ENSMUST00000087158 Lce3fQ6PAI4 98 aa2.27□□□□□ -2.05
Trim40-201ENSMUST00000087158 Lce3dE9Q8V1 98 aa2.26□□□□□ -2.05
Trim40-201ENSMUST00000087158 Sprr2hO70559 108 aa2.26□□□□□ -2.05
Trim40-201ENSMUST00000087158 Mt1P02802 61 aaKnown RBP2.24□□□□□ -2.05
Trim40-201ENSMUST00000087158 Kmt2dQ6PDK2 5588 aa2.24□□□□□ -2.05
Trim40-201ENSMUST00000087158 Sprr2eO70556 76 aa2.24□□□□□ -2.05
Trim40-201ENSMUST00000087158 ObscnA2AAJ9 8891 aaKnown RBP2.18□□□□□ -2.06
Trim40-201ENSMUST00000087158 Lce3aQ497I5 98 aa2.17□□□□□ -2.06
Trim40-201ENSMUST00000087158 Krtap5-5Q2TA51 241 aa2.15□□□□□ -2.07
Trim40-201ENSMUST00000087158 NebE9Q1W3 7152 aa2.12□□□□□ -2.07
Trim40-201ENSMUST00000087158 Gm40460A0A1B0GR10 244 aa2.03□□□□□ -2.08
Trim40-201ENSMUST00000087158 Gm7579A0A1B0GRJ4 243 aa2.03□□□□□ -2.08
Trim40-201ENSMUST00000087158 Krtap4-16Q91W93 202 aa2.02□□□□□ -2.09
Trim40-201ENSMUST00000087158 Gm10024A0A0A0MQA4 119 aa2.01□□□□□ -2.09
Trim40-201ENSMUST00000087158 AhnakE9Q616 5656 aaKnown RBP1.9□□□□□ -2.11
Trim40-201ENSMUST00000087158 1110025L11RikO09048 78 aa1.7□□□□□ -2.14
Trim40-201ENSMUST00000087158 Krtap6-5Q925H3 78 aa1.7□□□□□ -2.14
Trim40-201ENSMUST00000087158 Muc16A0A140LJ72 8478 aa1.69□□□□□ -2.14
Trim40-201ENSMUST00000087158 Gm10229O08631 77 aa1.66□□□□□ -2.14
Trim40-201ENSMUST00000087158 Sprr2bO70554 98 aa1.51□□□□□ -2.17
Trim40-201ENSMUST00000087158 Krtap21-1Q925H4 128 aa1.39□□□□□ -2.19
Trim40-201ENSMUST00000087158 Phgr1Q8K0G7 91 aa1.33□□□□□ -2.2
Trim40-201ENSMUST00000087158 Krtap6-2O08884 159 aa1.29□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 111.3 ms