RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Lce1a1Q9CQH5 143 aa4.42□□□□□ -1.7
Trim61-201ENSMUST00000078409 Sprr2kO70562 68 aa4.4□□□□□ -1.71
Trim61-201ENSMUST00000078409 Lce1lQ9D1G7 135 aa4.38□□□□□ -1.71
Trim61-201ENSMUST00000078409 Lce1bQ9D149 137 aa4.37□□□□□ -1.71
Trim61-201ENSMUST00000078409 Krtap19-9aF8WH65 55 aa4.29□□□□□ -1.72
Trim61-201ENSMUST00000078409 2300003K06RikA2A4M0 262 aa4.29□□□□□ -1.72
Trim61-201ENSMUST00000078409 Krtap20-2E9Q0A8 60 aa4.23□□□□□ -1.73
Trim61-201ENSMUST00000078409 Lce1hQ9D6R3 140 aa4.23□□□□□ -1.73
Trim61-201ENSMUST00000078409 Lce1eQ9D139 143 aa4.23□□□□□ -1.73
Trim61-201ENSMUST00000078409 Krtap8-1O08633 61 aa4.21□□□□□ -1.74
Trim61-201ENSMUST00000078409 Mt2P02798 61 aa4.19□□□□□ -1.74
Trim61-201ENSMUST00000078409 4933428G20RikQ9D3X4 101 aa4.18□□□□□ -1.74
Trim61-201ENSMUST00000078409 Lce1iQ9D6P5 149 aa4.18□□□□□ -1.74
Trim61-201ENSMUST00000078409 Eppk1Q8R0W0 6548 aa4.17□□□□□ -1.74
Trim61-201ENSMUST00000078409 Sprr2gO70558 76 aa4.14□□□□□ -1.75
Trim61-201ENSMUST00000078409 Lce1a2Q9D1K4 149 aa4.09□□□□□ -1.76
Trim61-201ENSMUST00000078409 Sprr2iO70560 76 aa4.05□□□□□ -1.76
Trim61-201ENSMUST00000078409 Krtap22-2J3QNX6 67 aa4.01□□□□□ -1.77
Trim61-201ENSMUST00000078409 Gm10272F7CZ33 110 aa3.98□□□□□ -1.77
Trim61-201ENSMUST00000078409 Spink7Q6IE32 76 aa3.98□□□□□ -1.77
Trim61-201ENSMUST00000078409 Gm11639A0A1D5RLM8 5808 aa3.9□□□□□ -1.79
Trim61-201ENSMUST00000078409 Gm11559Q9D3H7 191 aa3.81□□□□□ -1.8
Trim61-201ENSMUST00000078409 Sprr2fO70557 76 aa3.8□□□□□ -1.8
Trim61-201ENSMUST00000078409 Krtap5-2Q9D5Z7 189 aa3.79□□□□□ -1.8
Trim61-201ENSMUST00000078409 Gm11938Q9D3H4 131 aa3.78□□□□□ -1.8
Trim61-201ENSMUST00000078409 Gpr98Q8VHN7 6298 aaKnown RBP3.77□□□□□ -1.81
Trim61-201ENSMUST00000078409 Macf1Q9QXZ0 7354 aaKnown RBP3.73□□□□□ -1.81
Trim61-201ENSMUST00000078409 Gm11554B1AQB2 190 aa3.73□□□□□ -1.81
Trim61-201ENSMUST00000078409 Kmt2dQ6PDK2 5588 aa3.73□□□□□ -1.81
Trim61-201ENSMUST00000078409 Gm4553A0A1B0GSA9 284 aa3.67□□□□□ -1.82
Trim61-201ENSMUST00000078409 Gm45618A0A1B0GSA0 219 aa3.66□□□□□ -1.82
Trim61-201ENSMUST00000078409 Sprr2dO70555 85 aa3.66□□□□□ -1.82
Trim61-201ENSMUST00000078409 Muc19Q6PZE0 7524 aa3.62□□□□□ -1.83
Trim61-201ENSMUST00000078409 Lce1kJ3QP15 125 aa3.62□□□□□ -1.83
Trim61-201ENSMUST00000078409 Gm2431E9Q8S1 172 aa3.56□□□□□ -1.84
Trim61-201ENSMUST00000078409 Gm11568A2A4M2 211 aa3.54□□□□□ -1.84
Trim61-201ENSMUST00000078409 Krtap9-1Q64526 186 aa3.54□□□□□ -1.84
Trim61-201ENSMUST00000078409 Sprr2eO70556 76 aa3.52□□□□□ -1.85
Trim61-201ENSMUST00000078409 Gm10024A0A0A0MQA4 119 aa3.51□□□□□ -1.85
Trim61-201ENSMUST00000078409 Krtap19-9bQ99NG9 58 aa3.48□□□□□ -1.85
Trim61-201ENSMUST00000078409 Gm45337A0A1B0GS71 263 aa3.47□□□□□ -1.85
Trim61-201ENSMUST00000078409 Syne1Q6ZWR6 8799 aa3.42□□□□□ -1.86
Trim61-201ENSMUST00000078409 Gm39115A0A1B0GSH7 232 aa3.37□□□□□ -1.87
Trim61-201ENSMUST00000078409 Lce3bQ9CQM7 98 aa3.37□□□□□ -1.87
Trim61-201ENSMUST00000078409 DstQ91ZU6 7393 aaKnown RBP3.35□□□□□ -1.87
Trim61-201ENSMUST00000078409 NebE9Q1W3 7152 aa3.35□□□□□ -1.87
Trim61-201ENSMUST00000078409 Hmcn1D3YXG0 5634 aa3.34□□□□□ -1.87
Trim61-201ENSMUST00000078409 Lce1cQ9D1C5 147 aa3.34□□□□□ -1.88
Trim61-201ENSMUST00000078409 Gm40460A0A1B0GR10 244 aa3.33□□□□□ -1.88
Trim61-201ENSMUST00000078409 Gm7579A0A1B0GRJ4 243 aa3.33□□□□□ -1.88
Trim61-201ENSMUST00000078409 Krtap5-5Q2TA51 241 aa3.33□□□□□ -1.88
Trim61-201ENSMUST00000078409 Krtap5-4Q62220 223 aa3.33□□□□□ -1.88
Trim61-201ENSMUST00000078409 Lce1fB9EJP6 147 aa3.31□□□□□ -1.88
Trim61-201ENSMUST00000078409 Gm10142J3KMP7 120 aa3.31□□□□□ -1.88
Trim61-201ENSMUST00000078409 Krtap4-16Q91W93 202 aa3.31□□□□□ -1.88
Trim61-201ENSMUST00000078409 Krtap19-4Q925H7 84 aa3.31□□□□□ -1.88
Trim61-201ENSMUST00000078409 Gm10100J3QK64 120 aa3.29□□□□□ -1.88
Trim61-201ENSMUST00000078409 Gm10153A0A1B0GRL1 320 aa3.29□□□□□ -1.88
Trim61-201ENSMUST00000078409 Sprr2hO70559 108 aa3.26□□□□□ -1.89
Trim61-201ENSMUST00000078409 Gm29735A0A1B0GT06 219 aa3.23□□□□□ -1.89
Trim61-201ENSMUST00000078409 Gm11567Q9D141 195 aa3.22□□□□□ -1.89
Trim61-201ENSMUST00000078409 AhnakE9Q616 5656 aaKnown RBP3.13□□□□□ -1.91
Trim61-201ENSMUST00000078409 Mt1P02802 61 aaKnown RBP3.12□□□□□ -1.91
Trim61-201ENSMUST00000078409 Lce3dE9Q8V1 98 aa3.12□□□□□ -1.91
Trim61-201ENSMUST00000078409 Lce3eF8VQJ0 98 aa3.11□□□□□ -1.91
Trim61-201ENSMUST00000078409 Lce3fQ6PAI4 98 aa3.11□□□□□ -1.91
Trim61-201ENSMUST00000078409 Lce3aQ497I5 98 aa3.07□□□□□ -1.92
Trim61-201ENSMUST00000078409 Lce3cQ91V05 98 aa3.07□□□□□ -1.92
Trim61-201ENSMUST00000078409 Mt3P28184 68 aa2.94□□□□□ -1.94
Trim61-201ENSMUST00000078409 ObscnA2AAJ9 8891 aaKnown RBP2.77□□□□□ -1.97
Trim61-201ENSMUST00000078409 Krtap5-1Q64507 230 aa2.64□□□□□ -1.99
Trim61-201ENSMUST00000078409 Gm4559A4IF42 199 aa2.53□□□□□ -2
Trim61-201ENSMUST00000078409 Muc16A0A140LJ72 8478 aa2.38□□□□□ -2.03
Trim61-201ENSMUST00000078409 1110025L11RikO09048 78 aa2.16□□□□□ -2.06
Trim61-201ENSMUST00000078409 Sprr2bO70554 98 aa2.16□□□□□ -2.06
Trim61-201ENSMUST00000078409 Krtap6-5Q925H3 78 aa2.16□□□□□ -2.06
Trim61-201ENSMUST00000078409 Gm10229O08631 77 aa1.96□□□□□ -2.1
Trim61-201ENSMUST00000078409 Phgr1Q8K0G7 91 aa1.92□□□□□ -2.1
Trim61-201ENSMUST00000078409 Krtap6-2O08884 159 aa1.81□□□□□ -2.12
Trim61-201ENSMUST00000078409 Krtap21-1Q925H4 128 aa1.73□□□□□ -2.13
Retrieved 80 of 22,080 RNA–protein pairs in 246.5 ms