RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Sprr2iO70560 76 aa3.38□□□□□ -1.87
Upf3b-201ENSMUST00000076265 Lce1cQ9D1C5 147 aa3.36□□□□□ -1.87
Upf3b-201ENSMUST00000076265 Gm11595B1AQA7 289 aa3.35□□□□□ -1.87
Upf3b-201ENSMUST00000076265 Krtap4-6Q3V4B7 195 aa3.35□□□□□ -1.87
Upf3b-201ENSMUST00000076265 Krtap5-4Q62220 223 aa3.33□□□□□ -1.88
Upf3b-201ENSMUST00000076265 Krtap9-5A2A5X3 358 aa3.32□□□□□ -1.88
Upf3b-201ENSMUST00000076265 Krtap19-2Q925I0 141 aa3.32□□□□□ -1.88
Upf3b-201ENSMUST00000076265 Gm10024A0A0A0MQA4 119 aa3.31□□□□□ -1.88
Upf3b-201ENSMUST00000076265 Muc5bE9Q5I3 4800 aa3.3□□□□□ -1.88
Upf3b-201ENSMUST00000076265 Tnp1P10856 55 aa3.29□□□□□ -1.88
Upf3b-201ENSMUST00000076265 Lce1fB9EJP6 147 aa3.28□□□□□ -1.88
Upf3b-201ENSMUST00000076265 Krtap5-1Q64507 230 aa3.27□□□□□ -1.89
Upf3b-201ENSMUST00000076265 Mdn1A2ANY6 5589 aaKnown RBP3.26□□□□□ -1.89
Upf3b-201ENSMUST00000076265 Krtap12-1Q9Z287 130 aa3.26□□□□□ -1.89
Upf3b-201ENSMUST00000076265 Gm10153A0A1B0GRL1 320 aa3.24□□□□□ -1.89
Upf3b-201ENSMUST00000076265 Lce1kJ3QP15 125 aa3.23□□□□□ -1.89
Upf3b-201ENSMUST00000076265 2310046K23RikA0A0A6YVW6 87 aa3.22□□□□□ -1.89
Upf3b-201ENSMUST00000076265 Gm10100J3QK64 120 aa3.22□□□□□ -1.89
Upf3b-201ENSMUST00000076265 Gm11564A2A4L9 201 aa3.21□□□□□ -1.9
Upf3b-201ENSMUST00000076265 Krtap4-8B1AQA8 209 aa3.21□□□□□ -1.9
Upf3b-201ENSMUST00000076265 Gm6358A0A087WPH4 74 aa3.19□□□□□ -1.9
Upf3b-201ENSMUST00000076265 Krtap19-9aF8WH65 55 aa3.15□□□□□ -1.9
Upf3b-201ENSMUST00000076265 Gm4559A4IF42 199 aa3.15□□□□□ -1.91
Upf3b-201ENSMUST00000076265 Gm17402F6Z0L5 76 aa3.14□□□□□ -1.91
Upf3b-201ENSMUST00000076265 Sprr2fO70557 76 aa3.11□□□□□ -1.91
Upf3b-201ENSMUST00000076265 Gm10142J3KMP7 120 aa3.1□□□□□ -1.91
Upf3b-201ENSMUST00000076265 BC029722A0A0N4SW31 51 aa3.09□□□□□ -1.92
Upf3b-201ENSMUST00000076265 Lce1iQ9D6P5 149 aa3.08□□□□□ -1.92
Upf3b-201ENSMUST00000076265 Gm4553A0A1B0GSA9 284 aa3.07□□□□□ -1.92
Upf3b-201ENSMUST00000076265 Spink7Q6IE32 76 aa3.07□□□□□ -1.92
Upf3b-201ENSMUST00000076265 Fsip2A2ARZ3 6995 aa3.07□□□□□ -1.92
Upf3b-201ENSMUST00000076265 Mt4P47945 62 aa3.05□□□□□ -1.92
Upf3b-201ENSMUST00000076265 Hmcn1D3YXG0 5634 aa3.03□□□□□ -1.92
Upf3b-201ENSMUST00000076265 Lce1a2Q9D1K4 149 aa3.02□□□□□ -1.93
Upf3b-201ENSMUST00000076265 Mt2P02798 61 aa3.01□□□□□ -1.93
Upf3b-201ENSMUST00000076265 Krtap9-3Q3V2C1 136 aa2.99□□□□□ -1.93
Upf3b-201ENSMUST00000076265 Krtap6-3A0A087WQL6 57 aa2.96□□□□□ -1.94
Upf3b-201ENSMUST00000076265 Krtap8-1O08633 61 aa2.94□□□□□ -1.94
Upf3b-201ENSMUST00000076265 Sprr2kO70562 68 aa2.9□□□□□ -1.95
Upf3b-201ENSMUST00000076265 Krtap5-5Q2TA51 241 aa2.87□□□□□ -1.95
Upf3b-201ENSMUST00000076265 Krtap22-2J3QNX6 67 aa2.86□□□□□ -1.95
Upf3b-201ENSMUST00000076265 Gm11938Q9D3H4 131 aa2.8□□□□□ -1.96
Upf3b-201ENSMUST00000076265 Krtap19-4Q925H7 84 aa2.79□□□□□ -1.96
Upf3b-201ENSMUST00000076265 Sprr2gO70558 76 aa2.74□□□□□ -1.97
Upf3b-201ENSMUST00000076265 Mt3P28184 68 aa2.73□□□□□ -1.97
Upf3b-201ENSMUST00000076265 Krtap20-2E9Q0A8 60 aa2.71□□□□□ -1.97
Upf3b-201ENSMUST00000076265 Krtap5-2Q9D5Z7 189 aa2.71□□□□□ -1.98
Upf3b-201ENSMUST00000076265 Sprr2eO70556 76 aa2.7□□□□□ -1.98
Upf3b-201ENSMUST00000076265 Krtap19-9bQ99NG9 58 aa2.68□□□□□ -1.98
Upf3b-201ENSMUST00000076265 Sprr2dO70555 85 aa2.67□□□□□ -1.98
Upf3b-201ENSMUST00000076265 Gm40460A0A1B0GR10 244 aa2.66□□□□□ -1.98
Upf3b-201ENSMUST00000076265 Krtap4-16Q91W93 202 aa2.61□□□□□ -1.99
Upf3b-201ENSMUST00000076265 Eppk1Q8R0W0 6548 aa2.59□□□□□ -2
Upf3b-201ENSMUST00000076265 Gm7579A0A1B0GRJ4 243 aa2.52□□□□□ -2.01
Upf3b-201ENSMUST00000076265 Syne1Q6ZWR6 8799 aa2.51□□□□□ -2.01
Upf3b-201ENSMUST00000076265 Macf1Q9QXZ0 7354 aaKnown RBP2.44□□□□□ -2.02
Upf3b-201ENSMUST00000076265 Lce3bQ9CQM7 98 aa2.42□□□□□ -2.02
Upf3b-201ENSMUST00000076265 Gm11639A0A1D5RLM8 5808 aa2.38□□□□□ -2.03
Upf3b-201ENSMUST00000076265 Sprr2hO70559 108 aa2.36□□□□□ -2.03
Upf3b-201ENSMUST00000076265 Gpr98Q8VHN7 6298 aaKnown RBP2.35□□□□□ -2.03
Upf3b-201ENSMUST00000076265 Kmt2dQ6PDK2 5588 aa2.33□□□□□ -2.04
Upf3b-201ENSMUST00000076265 Muc19Q6PZE0 7524 aa2.3□□□□□ -2.04
Upf3b-201ENSMUST00000076265 Mt1P02802 61 aaKnown RBP2.25□□□□□ -2.05
Upf3b-201ENSMUST00000076265 Lce3eF8VQJ0 98 aa2.18□□□□□ -2.06
Upf3b-201ENSMUST00000076265 Lce3fQ6PAI4 98 aa2.18□□□□□ -2.06
Upf3b-201ENSMUST00000076265 Lce3cQ91V05 98 aa2.16□□□□□ -2.06
Upf3b-201ENSMUST00000076265 Lce3aQ497I5 98 aa2.14□□□□□ -2.07
Upf3b-201ENSMUST00000076265 ObscnA2AAJ9 8891 aaKnown RBP2.14□□□□□ -2.07
Upf3b-201ENSMUST00000076265 Lce3dE9Q8V1 98 aa2.14□□□□□ -2.07
Upf3b-201ENSMUST00000076265 DstQ91ZU6 7393 aaKnown RBP2.13□□□□□ -2.07
Upf3b-201ENSMUST00000076265 NebE9Q1W3 7152 aa2.08□□□□□ -2.08
Upf3b-201ENSMUST00000076265 AhnakE9Q616 5656 aaKnown RBP1.94□□□□□ -2.1
Upf3b-201ENSMUST00000076265 Gm10229O08631 77 aa1.8□□□□□ -2.12
Upf3b-201ENSMUST00000076265 Muc16A0A140LJ72 8478 aa1.73□□□□□ -2.13
Upf3b-201ENSMUST00000076265 Sprr2bO70554 98 aa1.68□□□□□ -2.14
Upf3b-201ENSMUST00000076265 1110025L11RikO09048 78 aa1.6□□□□□ -2.15
Upf3b-201ENSMUST00000076265 Krtap6-5Q925H3 78 aa1.6□□□□□ -2.15
Upf3b-201ENSMUST00000076265 Phgr1Q8K0G7 91 aa1.43□□□□□ -2.18
Upf3b-201ENSMUST00000076265 Krtap6-2O08884 159 aa1.41□□□□□ -2.18
Upf3b-201ENSMUST00000076265 Krtap21-1Q925H4 128 aa1.33□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 255.1 ms