RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Krtap4-9B1AQA9 244 aa4.14□□□□□ -1.75
Vamp1-202ENSMUST00000063588 4933428G20RikQ9D3X4 101 aa4.13□□□□□ -1.75
Vamp1-202ENSMUST00000063588 Lce1lQ9D1G7 135 aa4.1□□□□□ -1.75
Vamp1-202ENSMUST00000063588 Lce1bQ9D149 137 aa4.09□□□□□ -1.75
Vamp1-202ENSMUST00000063588 Krtap6-3A0A087WQL6 57 aa4.08□□□□□ -1.76
Vamp1-202ENSMUST00000063588 Lce1dQ9D731 133 aa4.05□□□□□ -1.76
Vamp1-202ENSMUST00000063588 Fsip2A2ARZ3 6995 aa4.05□□□□□ -1.76
Vamp1-202ENSMUST00000063588 Mt4P47945 62 aa4.04□□□□□ -1.76
Vamp1-202ENSMUST00000063588 Krtap31-1Q9D644 177 aa4.04□□□□□ -1.76
Vamp1-202ENSMUST00000063588 Krtap4-13Q9D7P3 165 aa3.98□□□□□ -1.77
Vamp1-202ENSMUST00000063588 Lce1eQ9D139 143 aa3.92□□□□□ -1.78
Vamp1-202ENSMUST00000063588 Sprr2kO70562 68 aa3.91□□□□□ -1.78
Vamp1-202ENSMUST00000063588 Gm10272F7CZ33 110 aa3.89□□□□□ -1.79
Vamp1-202ENSMUST00000063588 Sprr2gO70558 76 aa3.88□□□□□ -1.79
Vamp1-202ENSMUST00000063588 Gm11938Q9D3H4 131 aa3.82□□□□□ -1.8
Vamp1-202ENSMUST00000063588 Sprr2dO70555 85 aa3.8□□□□□ -1.8
Vamp1-202ENSMUST00000063588 2300003K06RikA2A4M0 262 aa3.78□□□□□ -1.8
Vamp1-202ENSMUST00000063588 A030003K21RikA0A1Y7VIM3 128 aa3.78□□□□□ -1.8
Vamp1-202ENSMUST00000063588 Gm11559Q9D3H7 191 aa3.78□□□□□ -1.8
Vamp1-202ENSMUST00000063588 Krtap20-2E9Q0A8 60 aa3.75□□□□□ -1.81
Vamp1-202ENSMUST00000063588 Krtap19-4Q925H7 84 aa3.64□□□□□ -1.83
Vamp1-202ENSMUST00000063588 Lce3bQ9CQM7 98 aa3.64□□□□□ -1.83
Vamp1-202ENSMUST00000063588 Sprr2iO70560 76 aa3.62□□□□□ -1.83
Vamp1-202ENSMUST00000063588 Syne1Q6ZWR6 8799 aa3.59□□□□□ -1.83
Vamp1-202ENSMUST00000063588 Gm6217A0A1Y7VJK9 128 aa3.56□□□□□ -1.84
Vamp1-202ENSMUST00000063588 Lce1cQ9D1C5 147 aa3.54□□□□□ -1.84
Vamp1-202ENSMUST00000063588 Eppk1Q8R0W0 6548 aa3.5□□□□□ -1.85
Vamp1-202ENSMUST00000063588 Gm10100J3QK64 120 aa3.48□□□□□ -1.85
Vamp1-202ENSMUST00000063588 A0A286YCP9 139 aa3.45□□□□□ -1.86
Vamp1-202ENSMUST00000063588 Sprr2fO70557 76 aa3.45□□□□□ -1.86
Vamp1-202ENSMUST00000063588 Lce3cQ91V05 98 aa3.44□□□□□ -1.86
Vamp1-202ENSMUST00000063588 Sprr2eO70556 76 aa3.41□□□□□ -1.86
Vamp1-202ENSMUST00000063588 Lce3dE9Q8V1 98 aa3.4□□□□□ -1.87
Vamp1-202ENSMUST00000063588 Lce3eF8VQJ0 98 aa3.4□□□□□ -1.87
Vamp1-202ENSMUST00000063588 Lce3fQ6PAI4 98 aa3.4□□□□□ -1.87
Vamp1-202ENSMUST00000063588 Lce1fB9EJP6 147 aa3.39□□□□□ -1.87
Vamp1-202ENSMUST00000063588 Lce1kJ3QP15 125 aa3.38□□□□□ -1.87
Vamp1-202ENSMUST00000063588 Mt1P02802 61 aaKnown RBP3.37□□□□□ -1.87
Vamp1-202ENSMUST00000063588 Gm10142J3KMP7 120 aa3.36□□□□□ -1.87
Vamp1-202ENSMUST00000063588 Krtap5-2Q9D5Z7 189 aa3.35□□□□□ -1.87
Vamp1-202ENSMUST00000063588 ObscnA2AAJ9 8891 aaKnown RBP3.31□□□□□ -1.88
Vamp1-202ENSMUST00000063588 Gm11554B1AQB2 190 aa3.3□□□□□ -1.88
Vamp1-202ENSMUST00000063588 Gm11568A2A4M2 211 aa3.29□□□□□ -1.88
Vamp1-202ENSMUST00000063588 Sprr2hO70559 108 aa3.29□□□□□ -1.88
Vamp1-202ENSMUST00000063588 Krtap9-1Q64526 186 aa3.29□□□□□ -1.88
Vamp1-202ENSMUST00000063588 Gm11639A0A1D5RLM8 5808 aa3.28□□□□□ -1.88
Vamp1-202ENSMUST00000063588 Lce3aQ497I5 98 aa3.26□□□□□ -1.89
Vamp1-202ENSMUST00000063588 Macf1Q9QXZ0 7354 aaKnown RBP3.24□□□□□ -1.89
Vamp1-202ENSMUST00000063588 Gm4553A0A1B0GSA9 284 aa3.22□□□□□ -1.89
Vamp1-202ENSMUST00000063588 Gpr98Q8VHN7 6298 aaKnown RBP3.18□□□□□ -1.9
Vamp1-202ENSMUST00000063588 Gm10153A0A1B0GRL1 320 aa3.15□□□□□ -1.91
Vamp1-202ENSMUST00000063588 Kmt2dQ6PDK2 5588 aa3.15□□□□□ -1.91
Vamp1-202ENSMUST00000063588 Muc19Q6PZE0 7524 aa3.13□□□□□ -1.91
Vamp1-202ENSMUST00000063588 Gm2431E9Q8S1 172 aa3.1□□□□□ -1.91
Vamp1-202ENSMUST00000063588 Gm45337A0A1B0GS71 263 aa3.07□□□□□ -1.92
Vamp1-202ENSMUST00000063588 Mt3P28184 68 aa3.03□□□□□ -1.92
Vamp1-202ENSMUST00000063588 Gm40460A0A1B0GR10 244 aa3□□□□□ -1.93
Vamp1-202ENSMUST00000063588 Gm7579A0A1B0GRJ4 243 aa3□□□□□ -1.93
Vamp1-202ENSMUST00000063588 Krtap5-5Q2TA51 241 aa3□□□□□ -1.93
Vamp1-202ENSMUST00000063588 Krtap5-4Q62220 223 aa3□□□□□ -1.93
Vamp1-202ENSMUST00000063588 Gm39115A0A1B0GSH7 232 aa2.95□□□□□ -1.94
Vamp1-202ENSMUST00000063588 Krtap4-16Q91W93 202 aa2.93□□□□□ -1.94
Vamp1-202ENSMUST00000063588 Gm11567Q9D141 195 aa2.91□□□□□ -1.94
Vamp1-202ENSMUST00000063588 Hmcn1D3YXG0 5634 aa2.88□□□□□ -1.95
Vamp1-202ENSMUST00000063588 DstQ91ZU6 7393 aaKnown RBP2.87□□□□□ -1.95
Vamp1-202ENSMUST00000063588 NebE9Q1W3 7152 aa2.86□□□□□ -1.95
Vamp1-202ENSMUST00000063588 Gm45618A0A1B0GSA0 219 aa2.85□□□□□ -1.95
Vamp1-202ENSMUST00000063588 Gm10024A0A0A0MQA4 119 aa2.82□□□□□ -1.96
Vamp1-202ENSMUST00000063588 Gm29735A0A1B0GT06 219 aa2.7□□□□□ -1.98
Vamp1-202ENSMUST00000063588 AhnakE9Q616 5656 aaKnown RBP2.57□□□□□ -2
Vamp1-202ENSMUST00000063588 1110025L11RikO09048 78 aa2.56□□□□□ -2
Vamp1-202ENSMUST00000063588 Krtap6-5Q925H3 78 aa2.56□□□□□ -2
Vamp1-202ENSMUST00000063588 Sprr2bO70554 98 aa2.45□□□□□ -2.02
Vamp1-202ENSMUST00000063588 Muc16A0A140LJ72 8478 aa2.32□□□□□ -2.04
Vamp1-202ENSMUST00000063588 Gm10229O08631 77 aa2.26□□□□□ -2.05
Vamp1-202ENSMUST00000063588 Krtap21-1Q925H4 128 aa2.09□□□□□ -2.07
Vamp1-202ENSMUST00000063588 Gm4559A4IF42 199 aa1.93□□□□□ -2.1
Vamp1-202ENSMUST00000063588 Krtap6-2O08884 159 aa1.93□□□□□ -2.1
Vamp1-202ENSMUST00000063588 Krtap5-1Q64507 230 aa1.93□□□□□ -2.1
Vamp1-202ENSMUST00000063588 Phgr1Q8K0G7 91 aa1.93□□□□□ -2.1
Retrieved 80 of 22,080 RNA–protein pairs in 112 ms