RNA–Protein interactions for RNA: ENSMUST00000057767.4

Upk1b-201, Transcript of Uroplakin-1b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk1b, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1b-201ENSMUST00000057767 Lce1a2Q9D1K4 149 aa4.04□□□□□ -1.76
Upk1b-201ENSMUST00000057767 Gm6358A0A087WPH4 74 aa3.98□□□□□ -1.77
Upk1b-201ENSMUST00000057767 Krtap9-3Q3V2C1 136 aa3.91□□□□□ -1.78
Upk1b-201ENSMUST00000057767 Gm11564A2A4L9 201 aa3.89□□□□□ -1.79
Upk1b-201ENSMUST00000057767 Gm11595B1AQA7 289 aa3.89□□□□□ -1.79
Upk1b-201ENSMUST00000057767 Krtap4-8B1AQA8 209 aa3.89□□□□□ -1.79
Upk1b-201ENSMUST00000057767 Fsip2A2ARZ3 6995 aa3.86□□□□□ -1.79
Upk1b-201ENSMUST00000057767 Gm45618A0A1B0GSA0 219 aa3.85□□□□□ -1.79
Upk1b-201ENSMUST00000057767 Gm11559Q9D3H7 191 aa3.83□□□□□ -1.8
Upk1b-201ENSMUST00000057767 Mt2P02798 61 aa3.81□□□□□ -1.8
Upk1b-201ENSMUST00000057767 Krtap4-9B1AQA9 244 aa3.78□□□□□ -1.8
Upk1b-201ENSMUST00000057767 Mt4P47945 62 aa3.73□□□□□ -1.81
Upk1b-201ENSMUST00000057767 Sprr2gO70558 76 aa3.71□□□□□ -1.81
Upk1b-201ENSMUST00000057767 4933428G20RikQ9D3X4 101 aa3.71□□□□□ -1.81
Upk1b-201ENSMUST00000057767 Krtap6-3A0A087WQL6 57 aa3.66□□□□□ -1.82
Upk1b-201ENSMUST00000057767 Gm39115A0A1B0GSH7 232 aa3.65□□□□□ -1.83
Upk1b-201ENSMUST00000057767 Sprr2dO70555 85 aa3.64□□□□□ -1.83
Upk1b-201ENSMUST00000057767 Krtap4-13Q9D7P3 165 aa3.64□□□□□ -1.83
Upk1b-201ENSMUST00000057767 Gm11554B1AQB2 190 aa3.61□□□□□ -1.83
Upk1b-201ENSMUST00000057767 Krtap22-2J3QNX6 67 aa3.59□□□□□ -1.83
Upk1b-201ENSMUST00000057767 Gm11938Q9D3H4 131 aa3.59□□□□□ -1.83
Upk1b-201ENSMUST00000057767 Gm10272F7CZ33 110 aa3.56□□□□□ -1.84
Upk1b-201ENSMUST00000057767 Gm2431E9Q8S1 172 aa3.53□□□□□ -1.84
Upk1b-201ENSMUST00000057767 2300003K06RikA2A4M0 262 aa3.51□□□□□ -1.85
Upk1b-201ENSMUST00000057767 Sprr2kO70562 68 aa3.51□□□□□ -1.85
Upk1b-201ENSMUST00000057767 Gm29735A0A1B0GT06 219 aa3.51□□□□□ -1.85
Upk1b-201ENSMUST00000057767 Gm11567Q9D141 195 aa3.49□□□□□ -1.85
Upk1b-201ENSMUST00000057767 Lce1cQ9D1C5 147 aa3.48□□□□□ -1.85
Upk1b-201ENSMUST00000057767 Lce1fB9EJP6 147 aa3.41□□□□□ -1.86
Upk1b-201ENSMUST00000057767 Krtap19-4Q925H7 84 aa3.41□□□□□ -1.86
Upk1b-201ENSMUST00000057767 Lce1kJ3QP15 125 aa3.4□□□□□ -1.87
Upk1b-201ENSMUST00000057767 Krtap20-2E9Q0A8 60 aa3.37□□□□□ -1.87
Upk1b-201ENSMUST00000057767 Gm10100J3QK64 120 aa3.34□□□□□ -1.87
Upk1b-201ENSMUST00000057767 Lce3bQ9CQM7 98 aa3.33□□□□□ -1.88
Upk1b-201ENSMUST00000057767 Gm10142J3KMP7 120 aa3.29□□□□□ -1.88
Upk1b-201ENSMUST00000057767 Krtap9-1Q64526 186 aa3.25□□□□□ -1.89
Upk1b-201ENSMUST00000057767 Eppk1Q8R0W0 6548 aa3.23□□□□□ -1.89
Upk1b-201ENSMUST00000057767 Sprr2iO70560 76 aa3.23□□□□□ -1.89
Upk1b-201ENSMUST00000057767 Syne1Q6ZWR6 8799 aa3.2□□□□□ -1.9
Upk1b-201ENSMUST00000057767 Lce3cQ91V05 98 aa3.18□□□□□ -1.9
Upk1b-201ENSMUST00000057767 Sprr2hO70559 108 aa3.17□□□□□ -1.9
Upk1b-201ENSMUST00000057767 Lce3dE9Q8V1 98 aa3.16□□□□□ -1.9
Upk1b-201ENSMUST00000057767 Sprr2eO70556 76 aa3.14□□□□□ -1.91
Upk1b-201ENSMUST00000057767 Krtap5-2Q9D5Z7 189 aa3.14□□□□□ -1.91
Upk1b-201ENSMUST00000057767 Macf1Q9QXZ0 7354 aaKnown RBP3.13□□□□□ -1.91
Upk1b-201ENSMUST00000057767 Gm11568A2A4M2 211 aa3.12□□□□□ -1.91
Upk1b-201ENSMUST00000057767 Lce3eF8VQJ0 98 aa3.12□□□□□ -1.91
Upk1b-201ENSMUST00000057767 Lce3fQ6PAI4 98 aa3.12□□□□□ -1.91
Upk1b-201ENSMUST00000057767 Sprr2fO70557 76 aa3.07□□□□□ -1.92
Upk1b-201ENSMUST00000057767 Gm11639A0A1D5RLM8 5808 aa3.06□□□□□ -1.92
Upk1b-201ENSMUST00000057767 Gm10153A0A1B0GRL1 320 aa3.06□□□□□ -1.92
Upk1b-201ENSMUST00000057767 Lce3aQ497I5 98 aa3.05□□□□□ -1.92
Upk1b-201ENSMUST00000057767 Gm45337A0A1B0GS71 263 aa3.04□□□□□ -1.92
Upk1b-201ENSMUST00000057767 Gpr98Q8VHN7 6298 aaKnown RBP3.01□□□□□ -1.93
Upk1b-201ENSMUST00000057767 Krtap5-4Q62220 223 aa3□□□□□ -1.93
Upk1b-201ENSMUST00000057767 ObscnA2AAJ9 8891 aaKnown RBP2.99□□□□□ -1.93
Upk1b-201ENSMUST00000057767 Gm4553A0A1B0GSA9 284 aa2.98□□□□□ -1.93
Upk1b-201ENSMUST00000057767 Kmt2dQ6PDK2 5588 aa2.97□□□□□ -1.93
Upk1b-201ENSMUST00000057767 Muc19Q6PZE0 7524 aa2.96□□□□□ -1.94
Upk1b-201ENSMUST00000057767 Mt1P02802 61 aaKnown RBP2.92□□□□□ -1.94
Upk1b-201ENSMUST00000057767 Hmcn1D3YXG0 5634 aa2.88□□□□□ -1.95
Upk1b-201ENSMUST00000057767 Gm10024A0A0A0MQA4 119 aa2.87□□□□□ -1.95
Upk1b-201ENSMUST00000057767 Mt3P28184 68 aa2.85□□□□□ -1.95
Upk1b-201ENSMUST00000057767 Gm40460A0A1B0GR10 244 aa2.77□□□□□ -1.97
Upk1b-201ENSMUST00000057767 Gm7579A0A1B0GRJ4 243 aa2.77□□□□□ -1.97
Upk1b-201ENSMUST00000057767 Krtap5-5Q2TA51 241 aa2.77□□□□□ -1.97
Upk1b-201ENSMUST00000057767 NebE9Q1W3 7152 aa2.76□□□□□ -1.97
Upk1b-201ENSMUST00000057767 Krtap4-16Q91W93 202 aa2.76□□□□□ -1.97
Upk1b-201ENSMUST00000057767 DstQ91ZU6 7393 aaKnown RBP2.76□□□□□ -1.97
Upk1b-201ENSMUST00000057767 Krtap5-1Q64507 230 aa2.52□□□□□ -2.01
Upk1b-201ENSMUST00000057767 AhnakE9Q616 5656 aaKnown RBP2.52□□□□□ -2.01
Upk1b-201ENSMUST00000057767 Gm4559A4IF42 199 aa2.49□□□□□ -2.01
Upk1b-201ENSMUST00000057767 1110025L11RikO09048 78 aa2.28□□□□□ -2.04
Upk1b-201ENSMUST00000057767 Krtap6-5Q925H3 78 aa2.28□□□□□ -2.04
Upk1b-201ENSMUST00000057767 Muc16A0A140LJ72 8478 aa2.21□□□□□ -2.06
Upk1b-201ENSMUST00000057767 Sprr2bO70554 98 aa2.2□□□□□ -2.06
Upk1b-201ENSMUST00000057767 Gm10229O08631 77 aa2□□□□□ -2.09
Upk1b-201ENSMUST00000057767 Krtap21-1Q925H4 128 aa1.87□□□□□ -2.11
Upk1b-201ENSMUST00000057767 Phgr1Q8K0G7 91 aa1.86□□□□□ -2.11
Upk1b-201ENSMUST00000057767 Krtap6-2O08884 159 aa1.67□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 78.4 ms