RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Lce1eQ9D139 143 aa3.22□□□□□ -1.89
Pcdh1-201ENSMUST00000057185 Gm10142J3KMP7 120 aa3.22□□□□□ -1.89
Pcdh1-201ENSMUST00000057185 Lce1lQ9D1G7 135 aa3.21□□□□□ -1.9
Pcdh1-201ENSMUST00000057185 Gm11938Q9D3H4 131 aa3.21□□□□□ -1.9
Pcdh1-201ENSMUST00000057185 2300003K06RikA2A4M0 262 aa3.17□□□□□ -1.9
Pcdh1-201ENSMUST00000057185 Lce3cQ91V05 98 aa3.16□□□□□ -1.9
Pcdh1-201ENSMUST00000057185 Lce1cQ9D1C5 147 aa3.16□□□□□ -1.9
Pcdh1-201ENSMUST00000057185 Muc16A0A140LJ72 8478 aa3.14□□□□□ -1.91
Pcdh1-201ENSMUST00000057185 Lce3eF8VQJ0 98 aa3.12□□□□□ -1.91
Pcdh1-201ENSMUST00000057185 Lce3fQ6PAI4 98 aa3.12□□□□□ -1.91
Pcdh1-201ENSMUST00000057185 Sprr2dO70555 85 aa3.12□□□□□ -1.91
Pcdh1-201ENSMUST00000057185 Krtap4-7Q9D732 168 aa3.12□□□□□ -1.91
Pcdh1-201ENSMUST00000057185 Lce3dE9Q8V1 98 aa3.12□□□□□ -1.91
Pcdh1-201ENSMUST00000057185 Krtap31-1Q9D644 177 aa3.08□□□□□ -1.92
Pcdh1-201ENSMUST00000057185 Krtap6-3A0A087WQL6 57 aa3.04□□□□□ -1.92
Pcdh1-201ENSMUST00000057185 Krtap19-4Q925H7 84 aa3.04□□□□□ -1.92
Pcdh1-201ENSMUST00000057185 Macf1Q9QXZ0 7354 aaKnown RBP3.04□□□□□ -1.92
Pcdh1-201ENSMUST00000057185 Lce1fB9EJP6 147 aa3.03□□□□□ -1.92
Pcdh1-201ENSMUST00000057185 Lce1a1Q9CQH5 143 aa3.03□□□□□ -1.92
Pcdh1-201ENSMUST00000057185 Lce1bQ9D149 137 aa3□□□□□ -1.93
Pcdh1-201ENSMUST00000057185 Lce3aQ497I5 98 aa2.99□□□□□ -1.93
Pcdh1-201ENSMUST00000057185 Sprr2iO70560 76 aa2.95□□□□□ -1.94
Pcdh1-201ENSMUST00000057185 Krtap31-2Q8CAY5 177 aa2.93□□□□□ -1.94
Pcdh1-201ENSMUST00000057185 ObscnA2AAJ9 8891 aaKnown RBP2.91□□□□□ -1.94
Pcdh1-201ENSMUST00000057185 Lce1kJ3QP15 125 aa2.87□□□□□ -1.95
Pcdh1-201ENSMUST00000057185 Krtap20-2E9Q0A8 60 aa2.85□□□□□ -1.95
Pcdh1-201ENSMUST00000057185 Sprr2hO70559 108 aa2.83□□□□□ -1.96
Pcdh1-201ENSMUST00000057185 Krtap4-16Q91W93 202 aa2.81□□□□□ -1.96
Pcdh1-201ENSMUST00000057185 Gm11554B1AQB2 190 aa2.76□□□□□ -1.97
Pcdh1-201ENSMUST00000057185 Sprr2fO70557 76 aa2.75□□□□□ -1.97
Pcdh1-201ENSMUST00000057185 Gm10024A0A0A0MQA4 119 aa2.71□□□□□ -1.98
Pcdh1-201ENSMUST00000057185 Sprr2eO70556 76 aa2.71□□□□□ -1.98
Pcdh1-201ENSMUST00000057185 Mt1P02802 61 aaKnown RBP2.64□□□□□ -1.99
Pcdh1-201ENSMUST00000057185 NebE9Q1W3 7152 aa2.61□□□□□ -1.99
Pcdh1-201ENSMUST00000057185 DstQ91ZU6 7393 aaKnown RBP2.58□□□□□ -2
Pcdh1-201ENSMUST00000057185 Muc19Q6PZE0 7524 aa2.56□□□□□ -2
Pcdh1-201ENSMUST00000057185 Eppk1Q8R0W0 6548 aa2.55□□□□□ -2
Pcdh1-201ENSMUST00000057185 Gm11568A2A4M2 211 aa2.54□□□□□ -2
Pcdh1-201ENSMUST00000057185 Krtap9-1Q64526 186 aa2.54□□□□□ -2
Pcdh1-201ENSMUST00000057185 Gm11559Q9D3H7 191 aa2.54□□□□□ -2
Pcdh1-201ENSMUST00000057185 Gm11639A0A1D5RLM8 5808 aa2.52□□□□□ -2.01
Pcdh1-201ENSMUST00000057185 Kmt2dQ6PDK2 5588 aa2.52□□□□□ -2.01
Pcdh1-201ENSMUST00000057185 Krtap5-2Q9D5Z7 189 aa2.49□□□□□ -2.01
Pcdh1-201ENSMUST00000057185 A0A1Y7VJH8 109 aa2.47□□□□□ -2.01
Pcdh1-201ENSMUST00000057185 Hmcn1D3YXG0 5634 aa2.45□□□□□ -2.02
Pcdh1-201ENSMUST00000057185 Mt3P28184 68 aa2.43□□□□□ -2.02
Pcdh1-201ENSMUST00000057185 Gpr98Q8VHN7 6298 aaKnown RBP2.41□□□□□ -2.02
Pcdh1-201ENSMUST00000057185 Gm4553A0A1B0GSA9 284 aa2.36□□□□□ -2.03
Pcdh1-201ENSMUST00000057185 Gm2431E9Q8S1 172 aa2.32□□□□□ -2.04
Pcdh1-201ENSMUST00000057185 A030005L19RikA0A1Y7VIU2 113 aa2.31□□□□□ -2.04
Pcdh1-201ENSMUST00000057185 Gm10153A0A1B0GRL1 320 aa2.22□□□□□ -2.05
Pcdh1-201ENSMUST00000057185 Gm45337A0A1B0GS71 263 aa2.21□□□□□ -2.06
Pcdh1-201ENSMUST00000057185 Gm40460A0A1B0GR10 244 aa2.12□□□□□ -2.07
Pcdh1-201ENSMUST00000057185 Gm7579A0A1B0GRJ4 243 aa2.12□□□□□ -2.07
Pcdh1-201ENSMUST00000057185 Krtap5-5Q2TA51 241 aa2.12□□□□□ -2.07
Pcdh1-201ENSMUST00000057185 Krtap5-4Q62220 223 aa2.12□□□□□ -2.07
Pcdh1-201ENSMUST00000057185 AhnakE9Q616 5656 aaKnown RBP2.09□□□□□ -2.08
Pcdh1-201ENSMUST00000057185 A0A1Y7VLE6 161 aa2.08□□□□□ -2.08
Pcdh1-201ENSMUST00000057185 Gm39115A0A1B0GSH7 232 aa2.07□□□□□ -2.08
Pcdh1-201ENSMUST00000057185 1110025L11RikO09048 78 aa2.06□□□□□ -2.08
Pcdh1-201ENSMUST00000057185 Krtap6-5Q925H3 78 aa2.06□□□□□ -2.08
Pcdh1-201ENSMUST00000057185 Sprr2bO70554 98 aa1.89□□□□□ -2.11
Pcdh1-201ENSMUST00000057185 Gm45618A0A1B0GSA0 219 aa1.88□□□□□ -2.11
Pcdh1-201ENSMUST00000057185 Gm10229O08631 77 aa1.85□□□□□ -2.11
Pcdh1-201ENSMUST00000057185 Phgr1Q8K0G7 91 aa1.78□□□□□ -2.12
Pcdh1-201ENSMUST00000057185 A0A1Y7VJ07 166 aa1.72□□□□□ -2.13
Pcdh1-201ENSMUST00000057185 Gm11567Q9D141 195 aa1.66□□□□□ -2.14
Pcdh1-201ENSMUST00000057185 Krtap21-1Q925H4 128 aa1.63□□□□□ -2.15
Pcdh1-201ENSMUST00000057185 Krtap6-2O08884 159 aa1.56□□□□□ -2.16
Pcdh1-201ENSMUST00000057185 Gm29735A0A1B0GT06 219 aa1.55□□□□□ -2.16
Pcdh1-201ENSMUST00000057185 A0A286YCP9 139 aa1.47□□□□□ -2.17
Pcdh1-201ENSMUST00000057185 Krtap5-1Q64507 230 aa1.26□□□□□ -2.21
Pcdh1-201ENSMUST00000057185 A030003K21RikA0A1Y7VIM3 128 aa1.22□□□□□ -2.21
Pcdh1-201ENSMUST00000057185 Gm6217A0A1Y7VJK9 128 aa0.93□□□□□ -2.26
Pcdh1-201ENSMUST00000057185 Krtap28-10A0A1Y7VP58 119 aa0.93□□□□□ -2.26
Pcdh1-201ENSMUST00000057185 Gm4559A4IF42 199 aa0.89□□□□□ -2.27
Pcdh1-201ENSMUST00000057185 Krtap28-13A0A087WQP5 138 aa0.86□□□□□ -2.27
Pcdh1-201ENSMUST00000057185 A030005K14RikA0A1Y7VNY1 122 aa0.76□□□□□ -2.29
Pcdh1-201ENSMUST00000057185 A030014E15RikA0A1Y7VJV2 120 aa0.74□□□□□ -2.29
Pcdh1-201ENSMUST00000057185 Gm7544A0A1Y7VJ58 118 aa0.69□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 12.7 ms