RNA–Protein interactions for RNA: ENSMUST00000050905.15

Tpm1-203, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-203ENSMUST00000050905 Gm20537G3UYK7 97 aa4.16□□□□□ -1.74
Tpm1-203ENSMUST00000050905 Ndufs5Q99LY9 106 aa4.16□□□□□ -1.74
Tpm1-203ENSMUST00000050905 Lce1a2Q9D1K4 149 aa4.16□□□□□ -1.74
Tpm1-203ENSMUST00000050905 Mt2P02798 61 aa4.14□□□□□ -1.75
Tpm1-203ENSMUST00000050905 CriptO70333 101 aa4.13□□□□□ -1.75
Tpm1-203ENSMUST00000050905 Gm9955Q8CEJ8 102 aa4.11□□□□□ -1.75
Tpm1-203ENSMUST00000050905 Gm10153A0A1B0GRL1 320 aa4.08□□□□□ -1.76
Tpm1-203ENSMUST00000050905 2300003K06RikA2A4M0 262 aa4.07□□□□□ -1.76
Tpm1-203ENSMUST00000050905 Krtap8-1O08633 61 aa4.07□□□□□ -1.76
Tpm1-203ENSMUST00000050905 Spink7Q6IE32 76 aa4.06□□□□□ -1.76
Tpm1-203ENSMUST00000050905 Eppk1Q8R0W0 6548 aa4.03□□□□□ -1.76
Tpm1-203ENSMUST00000050905 Gm17402F6Z0L5 76 aa3.95□□□□□ -1.78
Tpm1-203ENSMUST00000050905 Krtap22-2J3QNX6 67 aa3.93□□□□□ -1.78
Tpm1-203ENSMUST00000050905 Krtap20-2E9Q0A8 60 aa3.92□□□□□ -1.78
Tpm1-203ENSMUST00000050905 Sprr2gO70558 76 aa3.92□□□□□ -1.78
Tpm1-203ENSMUST00000050905 Krtap5-4Q62220 223 aa3.91□□□□□ -1.78
Tpm1-203ENSMUST00000050905 Gm12216A0A1W2P827 62 aa3.9□□□□□ -1.79
Tpm1-203ENSMUST00000050905 Gm45337A0A1B0GS71 263 aa3.88□□□□□ -1.79
Tpm1-203ENSMUST00000050905 Gm3880A0A1B0GSB3 72 aa3.88□□□□□ -1.79
Tpm1-203ENSMUST00000050905 Gm11639A0A1D5RLM8 5808 aa3.87□□□□□ -1.79
Tpm1-203ENSMUST00000050905 Romo1P60603 79 aa3.85□□□□□ -1.79
Tpm1-203ENSMUST00000050905 Sprr2a3Q4KL71 83 aa3.83□□□□□ -1.8
Tpm1-203ENSMUST00000050905 Sprr2a1Q9CQK8 83 aa3.83□□□□□ -1.8
Tpm1-203ENSMUST00000050905 2310046K23RikA0A0A6YVW6 87 aa3.81□□□□□ -1.8
Tpm1-203ENSMUST00000050905 Gpr98Q8VHN7 6298 aaKnown RBP3.8□□□□□ -1.8
Tpm1-203ENSMUST00000050905 Macf1Q9QXZ0 7354 aaKnown RBP3.7□□□□□ -1.82
Tpm1-203ENSMUST00000050905 Gm10142J3KMP7 120 aa3.66□□□□□ -1.82
Tpm1-203ENSMUST00000050905 Gm40193A0A1B0GT39 78 aa3.65□□□□□ -1.83
Tpm1-203ENSMUST00000050905 Camk2n1Q6QWF9 78 aa3.64□□□□□ -1.83
Tpm1-203ENSMUST00000050905 Krtap19-9bQ99NG9 58 aa3.56□□□□□ -1.84
Tpm1-203ENSMUST00000050905 Krtap5-2Q9D5Z7 189 aa3.56□□□□□ -1.84
Tpm1-203ENSMUST00000050905 Mp68P56379 58 aa3.53□□□□□ -1.84
Tpm1-203ENSMUST00000050905 Muc19Q6PZE0 7524 aa3.52□□□□□ -1.85
Tpm1-203ENSMUST00000050905 Sprr2iO70560 76 aa3.49□□□□□ -1.85
Tpm1-203ENSMUST00000050905 Kmt2dQ6PDK2 5588 aa3.49□□□□□ -1.85
Tpm1-203ENSMUST00000050905 Mt3P28184 68 aa3.48□□□□□ -1.85
Tpm1-203ENSMUST00000050905 Krtap7-1Q9D3I6 87 aa3.46□□□□□ -1.86
Tpm1-203ENSMUST00000050905 Gm11568A2A4M2 211 aa3.43□□□□□ -1.86
Tpm1-203ENSMUST00000050905 Krtap9-1Q64526 186 aa3.43□□□□□ -1.86
Tpm1-203ENSMUST00000050905 Gm4553A0A1B0GSA9 284 aa3.42□□□□□ -1.86
Tpm1-203ENSMUST00000050905 Gm20538F6Z9R1 75 aa3.42□□□□□ -1.86
Tpm1-203ENSMUST00000050905 Gm10272F7CZ33 110 aa3.38□□□□□ -1.87
Tpm1-203ENSMUST00000050905 Syne1Q6ZWR6 8799 aa3.35□□□□□ -1.87
Tpm1-203ENSMUST00000050905 Tnp1P10856 55 aa3.33□□□□□ -1.88
Tpm1-203ENSMUST00000050905 Lce3bQ9CQM7 98 aa3.33□□□□□ -1.88
Tpm1-203ENSMUST00000050905 DstQ91ZU6 7393 aaKnown RBP3.31□□□□□ -1.88
Tpm1-203ENSMUST00000050905 NebE9Q1W3 7152 aa3.3□□□□□ -1.88
Tpm1-203ENSMUST00000050905 Hmcn1D3YXG0 5634 aa3.18□□□□□ -1.9
Tpm1-203ENSMUST00000050905 Ndufaf8A2AMZ4 74 aa3.16□□□□□ -1.9
Tpm1-203ENSMUST00000050905 Gm7579A0A1B0GRJ4 243 aa3.13□□□□□ -1.91
Tpm1-203ENSMUST00000050905 Krtap5-1Q64507 230 aa3.13□□□□□ -1.91
Tpm1-203ENSMUST00000050905 Gm40460A0A1B0GR10 244 aa3.12□□□□□ -1.91
Tpm1-203ENSMUST00000050905 Krtap5-5Q2TA51 241 aa3.12□□□□□ -1.91
Tpm1-203ENSMUST00000050905 Krtap4-16Q91W93 202 aa3.12□□□□□ -1.91
Tpm1-203ENSMUST00000050905 Krtap19-4Q925H7 84 aa3.12□□□□□ -1.91
Tpm1-203ENSMUST00000050905 Gm11938Q9D3H4 131 aa3.09□□□□□ -1.91
Tpm1-203ENSMUST00000050905 Mt1P02802 61 aaKnown RBP3.08□□□□□ -1.92
Tpm1-203ENSMUST00000050905 Gm4559A4IF42 199 aa3.02□□□□□ -1.93
Tpm1-203ENSMUST00000050905 Sprr2fO70557 76 aa3.02□□□□□ -1.93
Tpm1-203ENSMUST00000050905 AhnakE9Q616 5656 aaKnown RBP2.99□□□□□ -1.93
Tpm1-203ENSMUST00000050905 Lce3cQ91V05 98 aa2.93□□□□□ -1.94
Tpm1-203ENSMUST00000050905 Lce3dE9Q8V1 98 aa2.88□□□□□ -1.95
Tpm1-203ENSMUST00000050905 Gm9112A2AI92 75 aa2.83□□□□□ -1.96
Tpm1-203ENSMUST00000050905 4933428G20RikQ9D3X4 101 aa2.82□□□□□ -1.96
Tpm1-203ENSMUST00000050905 ObscnA2AAJ9 8891 aaKnown RBP2.78□□□□□ -1.96
Tpm1-203ENSMUST00000050905 Lce3eF8VQJ0 98 aa2.77□□□□□ -1.97
Tpm1-203ENSMUST00000050905 Lce3fQ6PAI4 98 aa2.77□□□□□ -1.97
Tpm1-203ENSMUST00000050905 Sprr2dO70555 85 aa2.76□□□□□ -1.97
Tpm1-203ENSMUST00000050905 Lce3aQ497I5 98 aa2.65□□□□□ -1.99
Tpm1-203ENSMUST00000050905 Sprr2eO70556 76 aa2.51□□□□□ -2.01
Tpm1-203ENSMUST00000050905 Sprr2hO70559 108 aa2.45□□□□□ -2.02
Tpm1-203ENSMUST00000050905 Gm10024A0A0A0MQA4 119 aa2.4□□□□□ -2.03
Tpm1-203ENSMUST00000050905 Muc16A0A140LJ72 8478 aa2.29□□□□□ -2.04
Tpm1-203ENSMUST00000050905 Krtap6-5Q925H3 78 aa2.28□□□□□ -2.04
Tpm1-203ENSMUST00000050905 1110025L11RikO09048 78 aa2.16□□□□□ -2.06
Tpm1-203ENSMUST00000050905 Gm10229O08631 77 aa1.97□□□□□ -2.09
Tpm1-203ENSMUST00000050905 Sprr2bO70554 98 aa1.91□□□□□ -2.1
Tpm1-203ENSMUST00000050905 Krtap6-2O08884 159 aa1.86□□□□□ -2.11
Tpm1-203ENSMUST00000050905 Krtap21-1Q925H4 128 aa1.74□□□□□ -2.13
Tpm1-203ENSMUST00000050905 Phgr1Q8K0G7 91 aa1.4□□□□□ -2.19
Retrieved 80 of 22,080 RNA–protein pairs in 123.2 ms