RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Lce3fQ6PAI4 98 aa2.83□□□□□ -1.96
Usp28-201ENSMUST00000047349 Lce1fB9EJP6 147 aa2.83□□□□□ -1.96
Usp28-201ENSMUST00000047349 Lce1a1Q9CQH5 143 aa2.83□□□□□ -1.96
Usp28-201ENSMUST00000047349 Gm11596B1AQB0 205 aa2.81□□□□□ -1.96
Usp28-201ENSMUST00000047349 Lce3dE9Q8V1 98 aa2.81□□□□□ -1.96
Usp28-201ENSMUST00000047349 Gm38119A0A0A6YX29 146 aa2.8□□□□□ -1.96
Usp28-201ENSMUST00000047349 Gm11564A2A4L9 201 aa2.79□□□□□ -1.96
Usp28-201ENSMUST00000047349 Gm11563B1AQ90 168 aa2.79□□□□□ -1.96
Usp28-201ENSMUST00000047349 Gm11595B1AQA7 289 aa2.79□□□□□ -1.96
Usp28-201ENSMUST00000047349 Krtap4-8B1AQA8 209 aa2.79□□□□□ -1.96
Usp28-201ENSMUST00000047349 Lce1bQ9D149 137 aa2.79□□□□□ -1.96
Usp28-201ENSMUST00000047349 Mt4P47945 62 aa2.79□□□□□ -1.96
Usp28-201ENSMUST00000047349 Syne1Q6ZWR6 8799 aa2.78□□□□□ -1.96
Usp28-201ENSMUST00000047349 Sprr2hO70559 108 aa2.78□□□□□ -1.96
Usp28-201ENSMUST00000047349 Sprr2iO70560 76 aa2.77□□□□□ -1.97
Usp28-201ENSMUST00000047349 Krtap28-10A0A1Y7VP58 119 aa2.77□□□□□ -1.97
Usp28-201ENSMUST00000047349 Sprr2kO70562 68 aa2.76□□□□□ -1.97
Usp28-201ENSMUST00000047349 Sprr2eO70556 76 aa2.74□□□□□ -1.97
Usp28-201ENSMUST00000047349 Krtap4-9B1AQA9 244 aa2.73□□□□□ -1.97
Usp28-201ENSMUST00000047349 Gm7544A0A1Y7VJ58 118 aa2.72□□□□□ -1.97
Usp28-201ENSMUST00000047349 Lce3aQ497I5 98 aa2.72□□□□□ -1.97
Usp28-201ENSMUST00000047349 Krtap4-7Q9D732 168 aa2.69□□□□□ -1.98
Usp28-201ENSMUST00000047349 A030005L19RikA0A1Y7VIU2 113 aa2.67□□□□□ -1.98
Usp28-201ENSMUST00000047349 Lce1lQ9D1G7 135 aa2.67□□□□□ -1.98
Usp28-201ENSMUST00000047349 2300003K06RikA2A4M0 262 aa2.66□□□□□ -1.98
Usp28-201ENSMUST00000047349 Mt1P02802 61 aaKnown RBP2.66□□□□□ -1.98
Usp28-201ENSMUST00000047349 Sprr2fO70557 76 aa2.66□□□□□ -1.98
Usp28-201ENSMUST00000047349 Fsip2A2ARZ3 6995 aa2.64□□□□□ -1.99
Usp28-201ENSMUST00000047349 ObscnA2AAJ9 8891 aaKnown RBP2.64□□□□□ -1.99
Usp28-201ENSMUST00000047349 Krtap4-13Q9D7P3 165 aa2.63□□□□□ -1.99
Usp28-201ENSMUST00000047349 Lce1kJ3QP15 125 aa2.61□□□□□ -1.99
Usp28-201ENSMUST00000047349 Krtap28-13A0A087WQP5 138 aa2.58□□□□□ -2
Usp28-201ENSMUST00000047349 A030005K14RikA0A1Y7VNY1 122 aa2.57□□□□□ -2
Usp28-201ENSMUST00000047349 A030003K21RikA0A1Y7VIM3 128 aa2.5□□□□□ -2.01
Usp28-201ENSMUST00000047349 Krtap6-3A0A087WQL6 57 aa2.49□□□□□ -2.01
Usp28-201ENSMUST00000047349 Gm11568A2A4M2 211 aa2.48□□□□□ -2.01
Usp28-201ENSMUST00000047349 Krtap9-1Q64526 186 aa2.48□□□□□ -2.01
Usp28-201ENSMUST00000047349 Gm6217A0A1Y7VJK9 128 aa2.47□□□□□ -2.01
Usp28-201ENSMUST00000047349 Krtap5-2Q9D5Z7 189 aa2.46□□□□□ -2.02
Usp28-201ENSMUST00000047349 Krtap20-2E9Q0A8 60 aa2.45□□□□□ -2.02
Usp28-201ENSMUST00000047349 Gm10024A0A0A0MQA4 119 aa2.43□□□□□ -2.02
Usp28-201ENSMUST00000047349 Mt3P28184 68 aa2.4□□□□□ -2.02
Usp28-201ENSMUST00000047349 Eppk1Q8R0W0 6548 aa2.38□□□□□ -2.03
Usp28-201ENSMUST00000047349 Gm10153A0A1B0GRL1 320 aa2.36□□□□□ -2.03
Usp28-201ENSMUST00000047349 Krtap4-16Q91W93 202 aa2.36□□□□□ -2.03
Usp28-201ENSMUST00000047349 A0A1Y7VJ07 166 aa2.35□□□□□ -2.03
Usp28-201ENSMUST00000047349 Macf1Q9QXZ0 7354 aaKnown RBP2.32□□□□□ -2.04
Usp28-201ENSMUST00000047349 Gm4553A0A1B0GSA9 284 aa2.25□□□□□ -2.05
Usp28-201ENSMUST00000047349 Gm11639A0A1D5RLM8 5808 aa2.25□□□□□ -2.05
Usp28-201ENSMUST00000047349 Gm45337A0A1B0GS71 263 aa2.24□□□□□ -2.05
Usp28-201ENSMUST00000047349 Gm11559Q9D3H7 191 aa2.22□□□□□ -2.05
Usp28-201ENSMUST00000047349 A0A286YCP9 139 aa2.2□□□□□ -2.06
Usp28-201ENSMUST00000047349 Gm40460A0A1B0GR10 244 aa2.19□□□□□ -2.06
Usp28-201ENSMUST00000047349 Gm7579A0A1B0GRJ4 243 aa2.19□□□□□ -2.06
Usp28-201ENSMUST00000047349 Krtap5-5Q2TA51 241 aa2.19□□□□□ -2.06
Usp28-201ENSMUST00000047349 Krtap5-4Q62220 223 aa2.19□□□□□ -2.06
Usp28-201ENSMUST00000047349 A030014E15RikA0A1Y7VJV2 120 aa2.15□□□□□ -2.06
Usp28-201ENSMUST00000047349 Gm2431E9Q8S1 172 aa2.15□□□□□ -2.07
Usp28-201ENSMUST00000047349 Gm11554B1AQB2 190 aa2.12□□□□□ -2.07
Usp28-201ENSMUST00000047349 Hmcn1D3YXG0 5634 aa2.09□□□□□ -2.07
Usp28-201ENSMUST00000047349 1110025L11RikO09048 78 aa2.06□□□□□ -2.08
Usp28-201ENSMUST00000047349 Krtap6-5Q925H3 78 aa2.06□□□□□ -2.08
Usp28-201ENSMUST00000047349 Gpr98Q8VHN7 6298 aaKnown RBP2.06□□□□□ -2.08
Usp28-201ENSMUST00000047349 Gm39115A0A1B0GSH7 232 aa2.02□□□□□ -2.09
Usp28-201ENSMUST00000047349 DstQ91ZU6 7393 aaKnown RBP2.01□□□□□ -2.09
Usp28-201ENSMUST00000047349 NebE9Q1W3 7152 aa2.01□□□□□ -2.09
Usp28-201ENSMUST00000047349 Muc19Q6PZE0 7524 aa2□□□□□ -2.09
Usp28-201ENSMUST00000047349 Kmt2dQ6PDK2 5588 aa2□□□□□ -2.09
Usp28-201ENSMUST00000047349 Sprr2bO70554 98 aa2□□□□□ -2.09
Usp28-201ENSMUST00000047349 Muc16A0A140LJ72 8478 aa1.94□□□□□ -2.1
Usp28-201ENSMUST00000047349 Gm45618A0A1B0GSA0 219 aa1.87□□□□□ -2.11
Usp28-201ENSMUST00000047349 Gm10229O08631 77 aa1.83□□□□□ -2.12
Usp28-201ENSMUST00000047349 AhnakE9Q616 5656 aaKnown RBP1.77□□□□□ -2.13
Usp28-201ENSMUST00000047349 Krtap21-1Q925H4 128 aa1.68□□□□□ -2.14
Usp28-201ENSMUST00000047349 Gm29735A0A1B0GT06 219 aa1.67□□□□□ -2.14
Usp28-201ENSMUST00000047349 Gm11567Q9D141 195 aa1.66□□□□□ -2.14
Usp28-201ENSMUST00000047349 Phgr1Q8K0G7 91 aa1.64□□□□□ -2.15
Usp28-201ENSMUST00000047349 Krtap6-2O08884 159 aa1.53□□□□□ -2.16
Usp28-201ENSMUST00000047349 Krtap5-1Q64507 230 aa1.14□□□□□ -2.23
Usp28-201ENSMUST00000047349 Gm4559A4IF42 199 aa0.94□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 107.1 ms