RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 ZanO88799 5376 aa2.94□□□□□ -1.94
Ttc28-201ENSMUST00000040111 Sprr2eO70556 76 aa2.94□□□□□ -1.94
Ttc28-201ENSMUST00000040111 Krtap4-13Q9D7P3 165 aa2.94□□□□□ -1.94
Ttc28-201ENSMUST00000040111 Rnf213E9Q555 5152 aaKnown RBP2.93□□□□□ -1.94
Ttc28-201ENSMUST00000040111 Sprr2fO70557 76 aa2.93□□□□□ -1.94
Ttc28-201ENSMUST00000040111 Fat4Q2PZL6 4981 aa2.93□□□□□ -1.94
Ttc28-201ENSMUST00000040111 2300003K06RikA2A4M0 262 aa2.9□□□□□ -1.94
Ttc28-201ENSMUST00000040111 Krtap4-7Q9D732 168 aa2.86□□□□□ -1.95
Ttc28-201ENSMUST00000040111 Krtap9-3Q3V2C1 136 aa2.85□□□□□ -1.95
Ttc28-201ENSMUST00000040111 Ush2AQ2QI47 5193 aa2.85□□□□□ -1.95
Ttc28-201ENSMUST00000040111 Krtap31-2Q8CAY5 177 aa2.85□□□□□ -1.95
Ttc28-201ENSMUST00000040111 Muc5bE9Q5I3 4800 aa2.81□□□□□ -1.96
Ttc28-201ENSMUST00000040111 Krtap19-4Q925H7 84 aa2.79□□□□□ -1.96
Ttc28-201ENSMUST00000040111 Lce1kJ3QP15 125 aa2.74□□□□□ -1.97
Ttc28-201ENSMUST00000040111 Mt3P28184 68 aa2.72□□□□□ -1.97
Ttc28-201ENSMUST00000040111 Hmcn2A2AJ76 5100 aa2.69□□□□□ -1.98
Ttc28-201ENSMUST00000040111 Gm11554B1AQB2 190 aa2.63□□□□□ -1.99
Ttc28-201ENSMUST00000040111 Sprr2hO70559 108 aa2.63□□□□□ -1.99
Ttc28-201ENSMUST00000040111 Syne1Q6ZWR6 8799 aa2.61□□□□□ -1.99
Ttc28-201ENSMUST00000040111 Lce1a1Q9CQH5 143 aa2.61□□□□□ -1.99
Ttc28-201ENSMUST00000040111 Gm11562A0PK51 136 aa2.6□□□□□ -1.99
Ttc28-201ENSMUST00000040111 Fsip2A2ARZ3 6995 aa2.59□□□□□ -1.99
Ttc28-201ENSMUST00000040111 Sprr2dO70555 85 aa2.58□□□□□ -2
Ttc28-201ENSMUST00000040111 SspoQ8CG65 4998 aa2.57□□□□□ -2
Ttc28-201ENSMUST00000040111 Krtap4-16Q91W93 202 aa2.55□□□□□ -2
Ttc28-201ENSMUST00000040111 Krtap20-2E9Q0A8 60 aa2.47□□□□□ -2.01
Ttc28-201ENSMUST00000040111 Gm11938Q9D3H4 131 aa2.47□□□□□ -2.01
Ttc28-201ENSMUST00000040111 Krtap6-3A0A087WQL6 57 aa2.45□□□□□ -2.02
Ttc28-201ENSMUST00000040111 Syne2Q6ZWQ0 6874 aaKnown RBP2.44□□□□□ -2.02
Ttc28-201ENSMUST00000040111 Sprr2bO70554 98 aa2.31□□□□□ -2.04
Ttc28-201ENSMUST00000040111 Muc16A0A140LJ72 8478 aa2.27□□□□□ -2.05
Ttc28-201ENSMUST00000040111 Mt1P02802 61 aaKnown RBP2.24□□□□□ -2.05
Ttc28-201ENSMUST00000040111 Gm11555B1AQ89 175 aa2.23□□□□□ -2.05
Ttc28-201ENSMUST00000040111 Macf1Q9QXZ0 7354 aaKnown RBP2.17□□□□□ -2.06
Ttc28-201ENSMUST00000040111 ObscnA2AAJ9 8891 aaKnown RBP2.14□□□□□ -2.07
Ttc28-201ENSMUST00000040111 A0A1Y7VLE6 161 aa2.12□□□□□ -2.07
Ttc28-201ENSMUST00000040111 Kmt2dQ6PDK2 5588 aa2.06□□□□□ -2.08
Ttc28-201ENSMUST00000040111 A030003K21RikA0A1Y7VIM3 128 aa2.05□□□□□ -2.08
Ttc28-201ENSMUST00000040111 NebE9Q1W3 7152 aa2.05□□□□□ -2.08
Ttc28-201ENSMUST00000040111 DstQ91ZU6 7393 aaKnown RBP2.03□□□□□ -2.08
Ttc28-201ENSMUST00000040111 Muc19Q6PZE0 7524 aa2□□□□□ -2.09
Ttc28-201ENSMUST00000040111 Eppk1Q8R0W0 6548 aa1.99□□□□□ -2.09
Ttc28-201ENSMUST00000040111 Gm6217A0A1Y7VJK9 128 aa1.94□□□□□ -2.1
Ttc28-201ENSMUST00000040111 Gm11568A2A4M2 211 aa1.89□□□□□ -2.11
Ttc28-201ENSMUST00000040111 Krtap9-1Q64526 186 aa1.89□□□□□ -2.11
Ttc28-201ENSMUST00000040111 Gm11559Q9D3H7 191 aa1.87□□□□□ -2.11
Ttc28-201ENSMUST00000040111 Gpr98Q8VHN7 6298 aaKnown RBP1.82□□□□□ -2.12
Ttc28-201ENSMUST00000040111 1110025L11RikO09048 78 aa1.77□□□□□ -2.13
Ttc28-201ENSMUST00000040111 Krtap6-5Q925H3 78 aa1.77□□□□□ -2.13
Ttc28-201ENSMUST00000040111 Gm11639A0A1D5RLM8 5808 aa1.74□□□□□ -2.13
Ttc28-201ENSMUST00000040111 Gm10229O08631 77 aa1.7□□□□□ -2.14
Ttc28-201ENSMUST00000040111 Phgr1Q8K0G7 91 aa1.68□□□□□ -2.14
Ttc28-201ENSMUST00000040111 Krtap28-10A0A1Y7VP58 119 aa1.67□□□□□ -2.14
Ttc28-201ENSMUST00000040111 A0A1Y7VJH8 109 aa1.66□□□□□ -2.14
Ttc28-201ENSMUST00000040111 Hmcn1D3YXG0 5634 aa1.64□□□□□ -2.15
Ttc28-201ENSMUST00000040111 A0A1Y7VJ07 166 aa1.63□□□□□ -2.15
Ttc28-201ENSMUST00000040111 A030005K14RikA0A1Y7VNY1 122 aa1.58□□□□□ -2.16
Ttc28-201ENSMUST00000040111 Gm11567Q9D141 195 aa1.56□□□□□ -2.16
Ttc28-201ENSMUST00000040111 Gm7544A0A1Y7VJ58 118 aa1.53□□□□□ -2.16
Ttc28-201ENSMUST00000040111 Krtap5-2Q9D5Z7 189 aa1.52□□□□□ -2.17
Ttc28-201ENSMUST00000040111 Krtap28-13A0A087WQP5 138 aa1.51□□□□□ -2.17
Ttc28-201ENSMUST00000040111 A030005L19RikA0A1Y7VIU2 113 aa1.51□□□□□ -2.17
Ttc28-201ENSMUST00000040111 Gm2431E9Q8S1 172 aa1.5□□□□□ -2.17
Ttc28-201ENSMUST00000040111 A0A286YCP9 139 aa1.44□□□□□ -2.18
Ttc28-201ENSMUST00000040111 Gm4553A0A1B0GSA9 284 aa1.4□□□□□ -2.18
Ttc28-201ENSMUST00000040111 A030014E15RikA0A1Y7VJV2 120 aa1.38□□□□□ -2.19
Ttc28-201ENSMUST00000040111 Krtap6-2O08884 159 aa1.37□□□□□ -2.19
Ttc28-201ENSMUST00000040111 AhnakE9Q616 5656 aaKnown RBP1.34□□□□□ -2.19
Ttc28-201ENSMUST00000040111 Gm10153A0A1B0GRL1 320 aa1.28□□□□□ -2.2
Ttc28-201ENSMUST00000040111 Krtap21-1Q925H4 128 aa1.26□□□□□ -2.21
Ttc28-201ENSMUST00000040111 Gm45337A0A1B0GS71 263 aa1.14□□□□□ -2.23
Ttc28-201ENSMUST00000040111 Gm40460A0A1B0GR10 244 aa1.13□□□□□ -2.23
Ttc28-201ENSMUST00000040111 Gm7579A0A1B0GRJ4 243 aa1.13□□□□□ -2.23
Ttc28-201ENSMUST00000040111 Krtap5-5Q2TA51 241 aa1.13□□□□□ -2.23
Ttc28-201ENSMUST00000040111 Krtap5-4Q62220 223 aa1.13□□□□□ -2.23
Ttc28-201ENSMUST00000040111 Gm39115A0A1B0GSH7 232 aa1.05□□□□□ -2.24
Ttc28-201ENSMUST00000040111 Gm45618A0A1B0GSA0 219 aa0.98□□□□□ -2.25
Ttc28-201ENSMUST00000040111 Gm29735A0A1B0GT06 219 aa0.89□□□□□ -2.27
Ttc28-201ENSMUST00000040111 Krtap5-1Q64507 230 aa0.84□□□□□ -2.27
Ttc28-201ENSMUST00000040111 Gm4559A4IF42 199 aa0.73□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 99.6 ms