RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Gm11562A0PK51 136 aa3.47□□□□□ -1.85
Topbp1-201ENSMUST00000035164 Krtap4-16Q91W93 202 aa3.42□□□□□ -1.86
Topbp1-201ENSMUST00000035164 Krtap31-1Q9D644 177 aa3.42□□□□□ -1.86
Topbp1-201ENSMUST00000035164 Syne2Q6ZWQ0 6874 aaKnown RBP3.41□□□□□ -1.86
Topbp1-201ENSMUST00000035164 Sprr2iO70560 76 aa3.39□□□□□ -1.87
Topbp1-201ENSMUST00000035164 Sprr2kO70562 68 aa3.39□□□□□ -1.87
Topbp1-201ENSMUST00000035164 Lce1gQ9D195 139 aa3.38□□□□□ -1.87
Topbp1-201ENSMUST00000035164 Sprr2hO70559 108 aa3.35□□□□□ -1.87
Topbp1-201ENSMUST00000035164 Krtap4-6Q3V4B7 195 aa3.34□□□□□ -1.87
Topbp1-201ENSMUST00000035164 Sprr2fO70557 76 aa3.33□□□□□ -1.88
Topbp1-201ENSMUST00000035164 Lce1bQ9D149 137 aa3.3□□□□□ -1.88
Topbp1-201ENSMUST00000035164 A030003K21RikA0A1Y7VIM3 128 aa3.29□□□□□ -1.88
Topbp1-201ENSMUST00000035164 Lce1lQ9D1G7 135 aa3.29□□□□□ -1.88
Topbp1-201ENSMUST00000035164 Mt4P47945 62 aa3.28□□□□□ -1.88
Topbp1-201ENSMUST00000035164 Macf1Q9QXZ0 7354 aaKnown RBP3.26□□□□□ -1.89
Topbp1-201ENSMUST00000035164 Sprr2eO70556 76 aa3.21□□□□□ -1.9
Topbp1-201ENSMUST00000035164 Krtap4-1Q3UUY3 169 aa3.2□□□□□ -1.9
Topbp1-201ENSMUST00000035164 Gm10024A0A0A0MQA4 119 aa3.16□□□□□ -1.9
Topbp1-201ENSMUST00000035164 Muc19Q6PZE0 7524 aa3.12□□□□□ -1.91
Topbp1-201ENSMUST00000035164 Lce1kJ3QP15 125 aa3.11□□□□□ -1.91
Topbp1-201ENSMUST00000035164 Krtap4-9B1AQA9 244 aa3.1□□□□□ -1.91
Topbp1-201ENSMUST00000035164 2300003K06RikA2A4M0 262 aa3.09□□□□□ -1.91
Topbp1-201ENSMUST00000035164 Gm6217A0A1Y7VJK9 128 aa3.07□□□□□ -1.92
Topbp1-201ENSMUST00000035164 Gm11564A2A4L9 201 aa3.06□□□□□ -1.92
Topbp1-201ENSMUST00000035164 Gm11563B1AQ90 168 aa3.06□□□□□ -1.92
Topbp1-201ENSMUST00000035164 Gm11595B1AQA7 289 aa3.06□□□□□ -1.92
Topbp1-201ENSMUST00000035164 Krtap4-8B1AQA8 209 aa3.06□□□□□ -1.92
Topbp1-201ENSMUST00000035164 Krtap4-13Q9D7P3 165 aa3.04□□□□□ -1.92
Topbp1-201ENSMUST00000035164 Krtap4-2B1AQ85 167 aa3.01□□□□□ -1.93
Topbp1-201ENSMUST00000035164 Gm11596B1AQB0 205 aa2.97□□□□□ -1.93
Topbp1-201ENSMUST00000035164 Krtap4-7Q9D732 168 aa2.94□□□□□ -1.94
Topbp1-201ENSMUST00000035164 Mt1P02802 61 aaKnown RBP2.92□□□□□ -1.94
Topbp1-201ENSMUST00000035164 Gm11555B1AQ89 175 aa2.85□□□□□ -1.95
Topbp1-201ENSMUST00000035164 DstQ91ZU6 7393 aaKnown RBP2.8□□□□□ -1.96
Topbp1-201ENSMUST00000035164 Krtap28-10A0A1Y7VP58 119 aa2.79□□□□□ -1.96
Topbp1-201ENSMUST00000035164 Krtap20-2E9Q0A8 60 aa2.79□□□□□ -1.96
Topbp1-201ENSMUST00000035164 A0A1Y7VJH8 109 aa2.78□□□□□ -1.96
Topbp1-201ENSMUST00000035164 A030005K14RikA0A1Y7VNY1 122 aa2.77□□□□□ -1.97
Topbp1-201ENSMUST00000035164 Gm7544A0A1Y7VJ58 118 aa2.74□□□□□ -1.97
Topbp1-201ENSMUST00000035164 Krtap31-2Q8CAY5 177 aa2.7□□□□□ -1.98
Topbp1-201ENSMUST00000035164 Mt3P28184 68 aa2.69□□□□□ -1.98
Topbp1-201ENSMUST00000035164 A0A1Y7VJ07 166 aa2.66□□□□□ -1.98
Topbp1-201ENSMUST00000035164 Kmt2dQ6PDK2 5588 aa2.66□□□□□ -1.98
Topbp1-201ENSMUST00000035164 Krtap28-13A0A087WQP5 138 aa2.64□□□□□ -1.99
Topbp1-201ENSMUST00000035164 Gm11568A2A4M2 211 aa2.61□□□□□ -1.99
Topbp1-201ENSMUST00000035164 Krtap9-1Q64526 186 aa2.61□□□□□ -1.99
Topbp1-201ENSMUST00000035164 A030005L19RikA0A1Y7VIU2 113 aa2.61□□□□□ -1.99
Topbp1-201ENSMUST00000035164 Gm11554B1AQB2 190 aa2.59□□□□□ -2
Topbp1-201ENSMUST00000035164 NebE9Q1W3 7152 aa2.56□□□□□ -2
Topbp1-201ENSMUST00000035164 Krtap6-3A0A087WQL6 57 aa2.55□□□□□ -2
Topbp1-201ENSMUST00000035164 Hmcn1D3YXG0 5634 aa2.55□□□□□ -2
Topbp1-201ENSMUST00000035164 Krtap5-2Q9D5Z7 189 aa2.35□□□□□ -2.03
Topbp1-201ENSMUST00000035164 A030014E15RikA0A1Y7VJV2 120 aa2.34□□□□□ -2.03
Topbp1-201ENSMUST00000035164 Gm10153A0A1B0GRL1 320 aa2.34□□□□□ -2.03
Topbp1-201ENSMUST00000035164 1110025L11RikO09048 78 aa2.34□□□□□ -2.04
Topbp1-201ENSMUST00000035164 Krtap6-5Q925H3 78 aa2.34□□□□□ -2.04
Topbp1-201ENSMUST00000035164 Sprr2bO70554 98 aa2.27□□□□□ -2.05
Topbp1-201ENSMUST00000035164 Gm11559Q9D3H7 191 aa2.16□□□□□ -2.06
Topbp1-201ENSMUST00000035164 Gm11639A0A1D5RLM8 5808 aa2.16□□□□□ -2.06
Topbp1-201ENSMUST00000035164 Gm2431E9Q8S1 172 aa2.13□□□□□ -2.07
Topbp1-201ENSMUST00000035164 Phgr1Q8K0G7 91 aa2.12□□□□□ -2.07
Topbp1-201ENSMUST00000035164 Gm4553A0A1B0GSA9 284 aa2.11□□□□□ -2.07
Topbp1-201ENSMUST00000035164 Gm45337A0A1B0GS71 263 aa2.1□□□□□ -2.07
Topbp1-201ENSMUST00000035164 Gm10229O08631 77 aa2.1□□□□□ -2.07
Topbp1-201ENSMUST00000035164 Eppk1Q8R0W0 6548 aa2.07□□□□□ -2.08
Topbp1-201ENSMUST00000035164 Gm40460A0A1B0GR10 244 aa2.02□□□□□ -2.09
Topbp1-201ENSMUST00000035164 Gm7579A0A1B0GRJ4 243 aa2.02□□□□□ -2.09
Topbp1-201ENSMUST00000035164 Krtap5-5Q2TA51 241 aa2.02□□□□□ -2.09
Topbp1-201ENSMUST00000035164 Krtap5-4Q62220 223 aa2.02□□□□□ -2.09
Topbp1-201ENSMUST00000035164 AhnakE9Q616 5656 aaKnown RBP1.96□□□□□ -2.1
Topbp1-201ENSMUST00000035164 Gpr98Q8VHN7 6298 aaKnown RBP1.92□□□□□ -2.1
Topbp1-201ENSMUST00000035164 A0A286YCP9 139 aa1.9□□□□□ -2.11
Topbp1-201ENSMUST00000035164 Krtap21-1Q925H4 128 aa1.85□□□□□ -2.11
Topbp1-201ENSMUST00000035164 Gm39115A0A1B0GSH7 232 aa1.81□□□□□ -2.12
Topbp1-201ENSMUST00000035164 Gm11567Q9D141 195 aa1.8□□□□□ -2.12
Topbp1-201ENSMUST00000035164 Krtap6-2O08884 159 aa1.74□□□□□ -2.13
Topbp1-201ENSMUST00000035164 Gm29735A0A1B0GT06 219 aa1.52□□□□□ -2.17
Topbp1-201ENSMUST00000035164 Gm45618A0A1B0GSA0 219 aa1.44□□□□□ -2.18
Topbp1-201ENSMUST00000035164 Krtap5-1Q64507 230 aa0.93□□□□□ -2.26
Topbp1-201ENSMUST00000035164 Gm4559A4IF42 199 aa0.9□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 132.3 ms