RNA–Protein interactions for RNA: ENSMUST00000034880.9

Stra6-201, Transcript of Receptor for retinol uptake STRA6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stra6, Length 2,993 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6-201ENSMUST00000034880 Gm11596B1AQB0 205 aa3.19□□□□□ -1.9
Stra6-201ENSMUST00000034880 Lce3cQ91V05 98 aa3.18□□□□□ -1.9
Stra6-201ENSMUST00000034880 Lce3dE9Q8V1 98 aa3.16□□□□□ -1.9
Stra6-201ENSMUST00000034880 Gm11555B1AQ89 175 aa3.13□□□□□ -1.91
Stra6-201ENSMUST00000034880 Sprr2hO70559 108 aa3.12□□□□□ -1.91
Stra6-201ENSMUST00000034880 Gm11564A2A4L9 201 aa3.09□□□□□ -1.91
Stra6-201ENSMUST00000034880 Gm11563B1AQ90 168 aa3.09□□□□□ -1.91
Stra6-201ENSMUST00000034880 Gm11595B1AQA7 289 aa3.09□□□□□ -1.91
Stra6-201ENSMUST00000034880 Krtap4-8B1AQA8 209 aa3.09□□□□□ -1.91
Stra6-201ENSMUST00000034880 Lce3eF8VQJ0 98 aa3.08□□□□□ -1.92
Stra6-201ENSMUST00000034880 Lce3fQ6PAI4 98 aa3.08□□□□□ -1.92
Stra6-201ENSMUST00000034880 Mt4P47945 62 aa3.07□□□□□ -1.92
Stra6-201ENSMUST00000034880 Sprr2fO70557 76 aa3.05□□□□□ -1.92
Stra6-201ENSMUST00000034880 Krtap4-9B1AQA9 244 aa3.05□□□□□ -1.92
Stra6-201ENSMUST00000034880 Sprr2eO70556 76 aa3.05□□□□□ -1.92
Stra6-201ENSMUST00000034880 Lce3aQ497I5 98 aa3.04□□□□□ -1.92
Stra6-201ENSMUST00000034880 2300003K06RikA2A4M0 262 aa3.03□□□□□ -1.93
Stra6-201ENSMUST00000034880 ObscnA2AAJ9 8891 aaKnown RBP3.02□□□□□ -1.93
Stra6-201ENSMUST00000034880 Gm38119A0A0A6YX29 146 aa3□□□□□ -1.93
Stra6-201ENSMUST00000034880 Krtap4-16Q91W93 202 aa2.99□□□□□ -1.93
Stra6-201ENSMUST00000034880 Krtap4-13Q9D7P3 165 aa2.97□□□□□ -1.93
Stra6-201ENSMUST00000034880 Sprr2kO70562 68 aa2.92□□□□□ -1.94
Stra6-201ENSMUST00000034880 Lce1lQ9D1G7 135 aa2.82□□□□□ -1.96
Stra6-201ENSMUST00000034880 Lce1bQ9D149 137 aa2.82□□□□□ -1.96
Stra6-201ENSMUST00000034880 Macf1Q9QXZ0 7354 aaKnown RBP2.8□□□□□ -1.96
Stra6-201ENSMUST00000034880 Krtap4-7Q9D732 168 aa2.79□□□□□ -1.96
Stra6-201ENSMUST00000034880 Lce1kJ3QP15 125 aa2.74□□□□□ -1.97
Stra6-201ENSMUST00000034880 Mt1P02802 61 aaKnown RBP2.72□□□□□ -1.97
Stra6-201ENSMUST00000034880 Muc16A0A140LJ72 8478 aa2.71□□□□□ -1.98
Stra6-201ENSMUST00000034880 Krtap6-3A0A087WQL6 57 aa2.64□□□□□ -1.99
Stra6-201ENSMUST00000034880 Krtap20-2E9Q0A8 60 aa2.61□□□□□ -1.99
Stra6-201ENSMUST00000034880 Gm10024A0A0A0MQA4 119 aa2.61□□□□□ -1.99
Stra6-201ENSMUST00000034880 Gm11568A2A4M2 211 aa2.58□□□□□ -2
Stra6-201ENSMUST00000034880 Krtap9-1Q64526 186 aa2.58□□□□□ -2
Stra6-201ENSMUST00000034880 A0A1Y7VJH8 109 aa2.52□□□□□ -2.01
Stra6-201ENSMUST00000034880 Kmt2dQ6PDK2 5588 aa2.47□□□□□ -2.01
Stra6-201ENSMUST00000034880 Gm11554B1AQB2 190 aa2.47□□□□□ -2.01
Stra6-201ENSMUST00000034880 Krtap5-2Q9D5Z7 189 aa2.45□□□□□ -2.02
Stra6-201ENSMUST00000034880 Mt3P28184 68 aa2.4□□□□□ -2.03
Stra6-201ENSMUST00000034880 A0A1Y7VLE6 161 aa2.4□□□□□ -2.03
Stra6-201ENSMUST00000034880 Hmcn1D3YXG0 5634 aa2.4□□□□□ -2.03
Stra6-201ENSMUST00000034880 Muc19Q6PZE0 7524 aa2.39□□□□□ -2.03
Stra6-201ENSMUST00000034880 Gm10153A0A1B0GRL1 320 aa2.38□□□□□ -2.03
Stra6-201ENSMUST00000034880 DstQ91ZU6 7393 aaKnown RBP2.38□□□□□ -2.03
Stra6-201ENSMUST00000034880 NebE9Q1W3 7152 aa2.31□□□□□ -2.04
Stra6-201ENSMUST00000034880 Gm11559Q9D3H7 191 aa2.31□□□□□ -2.04
Stra6-201ENSMUST00000034880 Eppk1Q8R0W0 6548 aa2.27□□□□□ -2.05
Stra6-201ENSMUST00000034880 Gm11639A0A1D5RLM8 5808 aa2.25□□□□□ -2.05
Stra6-201ENSMUST00000034880 Gm4553A0A1B0GSA9 284 aa2.23□□□□□ -2.05
Stra6-201ENSMUST00000034880 Gm45337A0A1B0GS71 263 aa2.21□□□□□ -2.06
Stra6-201ENSMUST00000034880 Gm2431E9Q8S1 172 aa2.2□□□□□ -2.06
Stra6-201ENSMUST00000034880 Gm40460A0A1B0GR10 244 aa2.14□□□□□ -2.07
Stra6-201ENSMUST00000034880 Gm7579A0A1B0GRJ4 243 aa2.14□□□□□ -2.07
Stra6-201ENSMUST00000034880 Krtap5-5Q2TA51 241 aa2.14□□□□□ -2.07
Stra6-201ENSMUST00000034880 Krtap5-4Q62220 223 aa2.14□□□□□ -2.07
Stra6-201ENSMUST00000034880 1110025L11RikO09048 78 aa2.12□□□□□ -2.07
Stra6-201ENSMUST00000034880 Krtap6-5Q925H3 78 aa2.12□□□□□ -2.07
Stra6-201ENSMUST00000034880 A0A286YCP9 139 aa2.07□□□□□ -2.08
Stra6-201ENSMUST00000034880 A030005L19RikA0A1Y7VIU2 113 aa2.06□□□□□ -2.08
Stra6-201ENSMUST00000034880 Gm7544A0A1Y7VJ58 118 aa2.06□□□□□ -2.08
Stra6-201ENSMUST00000034880 Gpr98Q8VHN7 6298 aaKnown RBP2.03□□□□□ -2.08
Stra6-201ENSMUST00000034880 Sprr2bO70554 98 aa1.95□□□□□ -2.1
Stra6-201ENSMUST00000034880 Gm39115A0A1B0GSH7 232 aa1.95□□□□□ -2.1
Stra6-201ENSMUST00000034880 AhnakE9Q616 5656 aaKnown RBP1.93□□□□□ -2.1
Stra6-201ENSMUST00000034880 A030005K14RikA0A1Y7VNY1 122 aa1.87□□□□□ -2.11
Stra6-201ENSMUST00000034880 Gm10229O08631 77 aa1.87□□□□□ -2.11
Stra6-201ENSMUST00000034880 A030003K21RikA0A1Y7VIM3 128 aa1.86□□□□□ -2.11
Stra6-201ENSMUST00000034880 Gm6217A0A1Y7VJK9 128 aa1.86□□□□□ -2.11
Stra6-201ENSMUST00000034880 Krtap28-13A0A087WQP5 138 aa1.86□□□□□ -2.11
Stra6-201ENSMUST00000034880 Krtap28-10A0A1Y7VP58 119 aa1.85□□□□□ -2.11
Stra6-201ENSMUST00000034880 Phgr1Q8K0G7 91 aa1.85□□□□□ -2.11
Stra6-201ENSMUST00000034880 A0A1Y7VJ07 166 aa1.84□□□□□ -2.11
Stra6-201ENSMUST00000034880 Krtap21-1Q925H4 128 aa1.76□□□□□ -2.13
Stra6-201ENSMUST00000034880 Gm11567Q9D141 195 aa1.74□□□□□ -2.13
Stra6-201ENSMUST00000034880 Gm45618A0A1B0GSA0 219 aa1.71□□□□□ -2.14
Stra6-201ENSMUST00000034880 Gm29735A0A1B0GT06 219 aa1.62□□□□□ -2.15
Stra6-201ENSMUST00000034880 Krtap6-2O08884 159 aa1.55□□□□□ -2.16
Stra6-201ENSMUST00000034880 A030014E15RikA0A1Y7VJV2 120 aa1.5□□□□□ -2.17
Stra6-201ENSMUST00000034880 Krtap5-1Q64507 230 aa1.14□□□□□ -2.23
Stra6-201ENSMUST00000034880 Gm4559A4IF42 199 aa0.93□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 146.3 ms