RNA–Protein interactions for RNA: ENSMUST00000030336.10

Tnfrsf1b-201, Transcript of Tumor necrosis factor receptor superfamily member 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tnfrsf1b, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1b-201ENSMUST00000030336 Krtap4-9B1AQA9 244 aa3.06□□□□□ -1.92
Tnfrsf1b-201ENSMUST00000030336 Sprr2kO70562 68 aa3.05□□□□□ -1.92
Tnfrsf1b-201ENSMUST00000030336 Muc16A0A140LJ72 8478 aa3.04□□□□□ -1.92
Tnfrsf1b-201ENSMUST00000030336 Gm11562A0PK51 136 aa3.03□□□□□ -1.92
Tnfrsf1b-201ENSMUST00000030336 Gm10100J3QK64 120 aa3.02□□□□□ -1.93
Tnfrsf1b-201ENSMUST00000030336 Krtap4-13Q9D7P3 165 aa2.97□□□□□ -1.93
Tnfrsf1b-201ENSMUST00000030336 Lce3bQ9CQM7 98 aa2.97□□□□□ -1.93
Tnfrsf1b-201ENSMUST00000030336 Gm10142J3KMP7 120 aa2.93□□□□□ -1.94
Tnfrsf1b-201ENSMUST00000030336 2300003K06RikA2A4M0 262 aa2.91□□□□□ -1.94
Tnfrsf1b-201ENSMUST00000030336 Lce3cQ91V05 98 aa2.88□□□□□ -1.95
Tnfrsf1b-201ENSMUST00000030336 Lce3dE9Q8V1 98 aa2.86□□□□□ -1.95
Tnfrsf1b-201ENSMUST00000030336 Lce1bQ9D149 137 aa2.85□□□□□ -1.95
Tnfrsf1b-201ENSMUST00000030336 Lce1lQ9D1G7 135 aa2.84□□□□□ -1.95
Tnfrsf1b-201ENSMUST00000030336 Krtap4-7Q9D732 168 aa2.84□□□□□ -1.95
Tnfrsf1b-201ENSMUST00000030336 Krtap31-1Q9D644 177 aa2.83□□□□□ -1.96
Tnfrsf1b-201ENSMUST00000030336 Krtap19-4Q925H7 84 aa2.82□□□□□ -1.96
Tnfrsf1b-201ENSMUST00000030336 Sprr2iO70560 76 aa2.8□□□□□ -1.96
Tnfrsf1b-201ENSMUST00000030336 ObscnA2AAJ9 8891 aaKnown RBP2.78□□□□□ -1.97
Tnfrsf1b-201ENSMUST00000030336 Sprr2hO70559 108 aa2.77□□□□□ -1.97
Tnfrsf1b-201ENSMUST00000030336 Lce3eF8VQJ0 98 aa2.77□□□□□ -1.97
Tnfrsf1b-201ENSMUST00000030336 Lce3fQ6PAI4 98 aa2.77□□□□□ -1.97
Tnfrsf1b-201ENSMUST00000030336 Krtap4-16Q91W93 202 aa2.76□□□□□ -1.97
Tnfrsf1b-201ENSMUST00000030336 Lce3aQ497I5 98 aa2.73□□□□□ -1.97
Tnfrsf1b-201ENSMUST00000030336 Krtap6-3A0A087WQL6 57 aa2.71□□□□□ -1.98
Tnfrsf1b-201ENSMUST00000030336 Lce1kJ3QP15 125 aa2.71□□□□□ -1.98
Tnfrsf1b-201ENSMUST00000030336 Sprr2fO70557 76 aa2.67□□□□□ -1.98
Tnfrsf1b-201ENSMUST00000030336 Sprr2eO70556 76 aa2.66□□□□□ -1.98
Tnfrsf1b-201ENSMUST00000030336 Krtap20-2E9Q0A8 60 aa2.65□□□□□ -1.99
Tnfrsf1b-201ENSMUST00000030336 Macf1Q9QXZ0 7354 aaKnown RBP2.62□□□□□ -1.99
Tnfrsf1b-201ENSMUST00000030336 Krtap31-2Q8CAY5 177 aa2.51□□□□□ -2.01
Tnfrsf1b-201ENSMUST00000030336 Mt1P02802 61 aaKnown RBP2.5□□□□□ -2.01
Tnfrsf1b-201ENSMUST00000030336 Gm11568A2A4M2 211 aa2.49□□□□□ -2.01
Tnfrsf1b-201ENSMUST00000030336 Krtap9-1Q64526 186 aa2.49□□□□□ -2.01
Tnfrsf1b-201ENSMUST00000030336 Gm11554B1AQB2 190 aa2.47□□□□□ -2.01
Tnfrsf1b-201ENSMUST00000030336 A0A1Y7VJH8 109 aa2.45□□□□□ -2.02
Tnfrsf1b-201ENSMUST00000030336 Krtap5-2Q9D5Z7 189 aa2.43□□□□□ -2.02
Tnfrsf1b-201ENSMUST00000030336 Gm11559Q9D3H7 191 aa2.36□□□□□ -2.03
Tnfrsf1b-201ENSMUST00000030336 Gm10024A0A0A0MQA4 119 aa2.34□□□□□ -2.03
Tnfrsf1b-201ENSMUST00000030336 Kmt2dQ6PDK2 5588 aa2.32□□□□□ -2.04
Tnfrsf1b-201ENSMUST00000030336 Hmcn1D3YXG0 5634 aa2.32□□□□□ -2.04
Tnfrsf1b-201ENSMUST00000030336 Muc19Q6PZE0 7524 aa2.31□□□□□ -2.04
Tnfrsf1b-201ENSMUST00000030336 Mt3P28184 68 aa2.3□□□□□ -2.04
Tnfrsf1b-201ENSMUST00000030336 Gm4553A0A1B0GSA9 284 aa2.26□□□□□ -2.05
Tnfrsf1b-201ENSMUST00000030336 DstQ91ZU6 7393 aaKnown RBP2.25□□□□□ -2.05
Tnfrsf1b-201ENSMUST00000030336 Gm10153A0A1B0GRL1 320 aa2.24□□□□□ -2.05
Tnfrsf1b-201ENSMUST00000030336 Gm2431E9Q8S1 172 aa2.23□□□□□ -2.05
Tnfrsf1b-201ENSMUST00000030336 Eppk1Q8R0W0 6548 aa2.19□□□□□ -2.06
Tnfrsf1b-201ENSMUST00000030336 Gm45337A0A1B0GS71 263 aa2.18□□□□□ -2.06
Tnfrsf1b-201ENSMUST00000030336 NebE9Q1W3 7152 aa2.16□□□□□ -2.06
Tnfrsf1b-201ENSMUST00000030336 Gm11639A0A1D5RLM8 5808 aa2.14□□□□□ -2.07
Tnfrsf1b-201ENSMUST00000030336 A0A1Y7VLE6 161 aa2.13□□□□□ -2.07
Tnfrsf1b-201ENSMUST00000030336 A030005L19RikA0A1Y7VIU2 113 aa2.1□□□□□ -2.07
Tnfrsf1b-201ENSMUST00000030336 Gm40460A0A1B0GR10 244 aa2.1□□□□□ -2.07
Tnfrsf1b-201ENSMUST00000030336 Gm7579A0A1B0GRJ4 243 aa2.1□□□□□ -2.07
Tnfrsf1b-201ENSMUST00000030336 Krtap5-5Q2TA51 241 aa2.1□□□□□ -2.07
Tnfrsf1b-201ENSMUST00000030336 Krtap5-4Q62220 223 aa2.1□□□□□ -2.07
Tnfrsf1b-201ENSMUST00000030336 Gpr98Q8VHN7 6298 aaKnown RBP2.02□□□□□ -2.09
Tnfrsf1b-201ENSMUST00000030336 Gm39115A0A1B0GSH7 232 aa1.99□□□□□ -2.09
Tnfrsf1b-201ENSMUST00000030336 AhnakE9Q616 5656 aaKnown RBP1.93□□□□□ -2.1
Tnfrsf1b-201ENSMUST00000030336 1110025L11RikO09048 78 aa1.88□□□□□ -2.11
Tnfrsf1b-201ENSMUST00000030336 Krtap6-5Q925H3 78 aa1.88□□□□□ -2.11
Tnfrsf1b-201ENSMUST00000030336 Gm45618A0A1B0GSA0 219 aa1.75□□□□□ -2.13
Tnfrsf1b-201ENSMUST00000030336 Sprr2bO70554 98 aa1.69□□□□□ -2.14
Tnfrsf1b-201ENSMUST00000030336 Gm10229O08631 77 aa1.69□□□□□ -2.14
Tnfrsf1b-201ENSMUST00000030336 Phgr1Q8K0G7 91 aa1.67□□□□□ -2.14
Tnfrsf1b-201ENSMUST00000030336 Gm11567Q9D141 195 aa1.63□□□□□ -2.15
Tnfrsf1b-201ENSMUST00000030336 A0A286YCP9 139 aa1.63□□□□□ -2.15
Tnfrsf1b-201ENSMUST00000030336 A0A1Y7VJ07 166 aa1.63□□□□□ -2.15
Tnfrsf1b-201ENSMUST00000030336 Krtap21-1Q925H4 128 aa1.56□□□□□ -2.16
Tnfrsf1b-201ENSMUST00000030336 Gm29735A0A1B0GT06 219 aa1.55□□□□□ -2.16
Tnfrsf1b-201ENSMUST00000030336 A030005K14RikA0A1Y7VNY1 122 aa1.52□□□□□ -2.17
Tnfrsf1b-201ENSMUST00000030336 Krtap6-2O08884 159 aa1.45□□□□□ -2.18
Tnfrsf1b-201ENSMUST00000030336 Krtap28-13A0A087WQP5 138 aa1.43□□□□□ -2.18
Tnfrsf1b-201ENSMUST00000030336 Krtap28-10A0A1Y7VP58 119 aa1.42□□□□□ -2.18
Tnfrsf1b-201ENSMUST00000030336 A030014E15RikA0A1Y7VJV2 120 aa1.39□□□□□ -2.19
Tnfrsf1b-201ENSMUST00000030336 Gm7544A0A1Y7VJ58 118 aa1.31□□□□□ -2.2
Tnfrsf1b-201ENSMUST00000030336 A030003K21RikA0A1Y7VIM3 128 aa1.14□□□□□ -2.23
Tnfrsf1b-201ENSMUST00000030336 Krtap5-1Q64507 230 aa1.12□□□□□ -2.23
Tnfrsf1b-201ENSMUST00000030336 Gm6217A0A1Y7VJK9 128 aa0.95□□□□□ -2.26
Tnfrsf1b-201ENSMUST00000030336 Gm4559A4IF42 199 aa0.9□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 129.7 ms