RNA–Protein interactions for RNA: ENSMUST00000029682.10

Thbs3-201, Transcript of Thrombospondin-3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Thbs3, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3-201ENSMUST00000029682 Gm11595B1AQA7 289 aa3.18□□□□□ -1.9
Thbs3-201ENSMUST00000029682 Krtap4-8B1AQA8 209 aa3.18□□□□□ -1.9
Thbs3-201ENSMUST00000029682 Lce1cQ9D1C5 147 aa3.12□□□□□ -1.91
Thbs3-201ENSMUST00000029682 Muc16A0A140LJ72 8478 aa3.04□□□□□ -1.92
Thbs3-201ENSMUST00000029682 Gm10100J3QK64 120 aa3.03□□□□□ -1.92
Thbs3-201ENSMUST00000029682 Krtap4-9B1AQA9 244 aa3.01□□□□□ -1.93
Thbs3-201ENSMUST00000029682 Lce1fB9EJP6 147 aa3.01□□□□□ -1.93
Thbs3-201ENSMUST00000029682 Lce1a1Q9CQH5 143 aa3.01□□□□□ -1.93
Thbs3-201ENSMUST00000029682 Krtap20-2E9Q0A8 60 aa3.01□□□□□ -1.93
Thbs3-201ENSMUST00000029682 Krtap19-4Q925H7 84 aa2.98□□□□□ -1.93
Thbs3-201ENSMUST00000029682 Lce3bQ9CQM7 98 aa2.96□□□□□ -1.94
Thbs3-201ENSMUST00000029682 Eppk1Q8R0W0 6548 aa2.94□□□□□ -1.94
Thbs3-201ENSMUST00000029682 Fsip2A2ARZ3 6995 aa2.94□□□□□ -1.94
Thbs3-201ENSMUST00000029682 Gm10142J3KMP7 120 aa2.94□□□□□ -1.94
Thbs3-201ENSMUST00000029682 Mt4P47945 62 aa2.91□□□□□ -1.94
Thbs3-201ENSMUST00000029682 A030005L19RikA0A1Y7VIU2 113 aa2.9□□□□□ -1.94
Thbs3-201ENSMUST00000029682 Krtap4-16Q91W93 202 aa2.9□□□□□ -1.95
Thbs3-201ENSMUST00000029682 Sprr2iO70560 76 aa2.88□□□□□ -1.95
Thbs3-201ENSMUST00000029682 Lce3cQ91V05 98 aa2.88□□□□□ -1.95
Thbs3-201ENSMUST00000029682 Lce3dE9Q8V1 98 aa2.86□□□□□ -1.95
Thbs3-201ENSMUST00000029682 Krtap4-13Q9D7P3 165 aa2.86□□□□□ -1.95
Thbs3-201ENSMUST00000029682 ObscnA2AAJ9 8891 aaKnown RBP2.84□□□□□ -1.95
Thbs3-201ENSMUST00000029682 A0A1Y7VJH8 109 aa2.81□□□□□ -1.96
Thbs3-201ENSMUST00000029682 Sprr2hO70559 108 aa2.81□□□□□ -1.96
Thbs3-201ENSMUST00000029682 Sprr2kO70562 68 aa2.8□□□□□ -1.96
Thbs3-201ENSMUST00000029682 Lce3eF8VQJ0 98 aa2.77□□□□□ -1.97
Thbs3-201ENSMUST00000029682 Lce3fQ6PAI4 98 aa2.77□□□□□ -1.97
Thbs3-201ENSMUST00000029682 2300003K06RikA2A4M0 262 aa2.74□□□□□ -1.97
Thbs3-201ENSMUST00000029682 Lce1lQ9D1G7 135 aa2.74□□□□□ -1.97
Thbs3-201ENSMUST00000029682 Lce3aQ497I5 98 aa2.74□□□□□ -1.97
Thbs3-201ENSMUST00000029682 Sprr2eO70556 76 aa2.73□□□□□ -1.97
Thbs3-201ENSMUST00000029682 Krtap5-2Q9D5Z7 189 aa2.72□□□□□ -1.97
Thbs3-201ENSMUST00000029682 Sprr2fO70557 76 aa2.71□□□□□ -1.97
Thbs3-201ENSMUST00000029682 Gm11639A0A1D5RLM8 5808 aa2.66□□□□□ -1.98
Thbs3-201ENSMUST00000029682 Gm4553A0A1B0GSA9 284 aa2.65□□□□□ -1.98
Thbs3-201ENSMUST00000029682 Mt1P02802 61 aaKnown RBP2.6□□□□□ -1.99
Thbs3-201ENSMUST00000029682 Krtap9-1Q64526 186 aa2.57□□□□□ -2
Thbs3-201ENSMUST00000029682 Gm45337A0A1B0GS71 263 aa2.56□□□□□ -2
Thbs3-201ENSMUST00000029682 Lce1kJ3QP15 125 aa2.56□□□□□ -2
Thbs3-201ENSMUST00000029682 Gm39115A0A1B0GSH7 232 aa2.51□□□□□ -2.01
Thbs3-201ENSMUST00000029682 Gm2431E9Q8S1 172 aa2.51□□□□□ -2.01
Thbs3-201ENSMUST00000029682 Kmt2dQ6PDK2 5588 aa2.5□□□□□ -2.01
Thbs3-201ENSMUST00000029682 Gm40460A0A1B0GR10 244 aa2.49□□□□□ -2.01
Thbs3-201ENSMUST00000029682 Gm7579A0A1B0GRJ4 243 aa2.49□□□□□ -2.01
Thbs3-201ENSMUST00000029682 Krtap5-5Q2TA51 241 aa2.49□□□□□ -2.01
Thbs3-201ENSMUST00000029682 Krtap5-4Q62220 223 aa2.49□□□□□ -2.01
Thbs3-201ENSMUST00000029682 Gm45618A0A1B0GSA0 219 aa2.47□□□□□ -2.01
Thbs3-201ENSMUST00000029682 Gm11568A2A4M2 211 aa2.46□□□□□ -2.02
Thbs3-201ENSMUST00000029682 Macf1Q9QXZ0 7354 aaKnown RBP2.45□□□□□ -2.02
Thbs3-201ENSMUST00000029682 Gm10024A0A0A0MQA4 119 aa2.45□□□□□ -2.02
Thbs3-201ENSMUST00000029682 Gpr98Q8VHN7 6298 aaKnown RBP2.36□□□□□ -2.03
Thbs3-201ENSMUST00000029682 Gm10153A0A1B0GRL1 320 aa2.34□□□□□ -2.03
Thbs3-201ENSMUST00000029682 Gm11554B1AQB2 190 aa2.34□□□□□ -2.04
Thbs3-201ENSMUST00000029682 Muc19Q6PZE0 7524 aa2.32□□□□□ -2.04
Thbs3-201ENSMUST00000029682 A0A1Y7VLE6 161 aa2.3□□□□□ -2.04
Thbs3-201ENSMUST00000029682 Mt3P28184 68 aa2.28□□□□□ -2.04
Thbs3-201ENSMUST00000029682 Hmcn1D3YXG0 5634 aa2.27□□□□□ -2.05
Thbs3-201ENSMUST00000029682 AhnakE9Q616 5656 aaKnown RBP2.26□□□□□ -2.05
Thbs3-201ENSMUST00000029682 DstQ91ZU6 7393 aaKnown RBP2.08□□□□□ -2.08
Thbs3-201ENSMUST00000029682 NebE9Q1W3 7152 aa2.03□□□□□ -2.08
Thbs3-201ENSMUST00000029682 1110025L11RikO09048 78 aa2.01□□□□□ -2.09
Thbs3-201ENSMUST00000029682 Krtap6-5Q925H3 78 aa2.01□□□□□ -2.09
Thbs3-201ENSMUST00000029682 Sprr2bO70554 98 aa1.86□□□□□ -2.11
Thbs3-201ENSMUST00000029682 Gm11567Q9D141 195 aa1.84□□□□□ -2.12
Thbs3-201ENSMUST00000029682 Gm29735A0A1B0GT06 219 aa1.83□□□□□ -2.12
Thbs3-201ENSMUST00000029682 A0A1Y7VJ07 166 aa1.8□□□□□ -2.12
Thbs3-201ENSMUST00000029682 Gm10229O08631 77 aa1.77□□□□□ -2.13
Thbs3-201ENSMUST00000029682 Krtap28-10A0A1Y7VP58 119 aa1.74□□□□□ -2.13
Thbs3-201ENSMUST00000029682 Phgr1Q8K0G7 91 aa1.7□□□□□ -2.14
Thbs3-201ENSMUST00000029682 Krtap21-1Q925H4 128 aa1.66□□□□□ -2.14
Thbs3-201ENSMUST00000029682 A0A286YCP9 139 aa1.65□□□□□ -2.15
Thbs3-201ENSMUST00000029682 Krtap6-2O08884 159 aa1.48□□□□□ -2.17
Thbs3-201ENSMUST00000029682 Krtap5-1Q64507 230 aa1.41□□□□□ -2.18
Thbs3-201ENSMUST00000029682 A030003K21RikA0A1Y7VIM3 128 aa1.38□□□□□ -2.19
Thbs3-201ENSMUST00000029682 Gm4559A4IF42 199 aa1.14□□□□□ -2.23
Thbs3-201ENSMUST00000029682 A030005K14RikA0A1Y7VNY1 122 aa1.11□□□□□ -2.23
Thbs3-201ENSMUST00000029682 A030014E15RikA0A1Y7VJV2 120 aa1.1□□□□□ -2.23
Thbs3-201ENSMUST00000029682 Gm6217A0A1Y7VJK9 128 aa1.04□□□□□ -2.24
Thbs3-201ENSMUST00000029682 Krtap28-13A0A087WQP5 138 aa0.99□□□□□ -2.25
Thbs3-201ENSMUST00000029682 Gm7544A0A1Y7VJ58 118 aa0.72□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 104.6 ms