RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Krtap19-9bQ99NG9 58 aa4.19□□□□□ -1.74
Trim55-201ENSMUST00000029139 Lce1bQ9D149 137 aa4.17□□□□□ -1.74
Trim55-201ENSMUST00000029139 Mt4P47945 62 aa4.17□□□□□ -1.74
Trim55-201ENSMUST00000029139 Gm10318A0A1W2P728 225 aa4.15□□□□□ -1.75
Trim55-201ENSMUST00000029139 Krtap9-3Q3V2C1 136 aa4.15□□□□□ -1.75
Trim55-201ENSMUST00000029139 Lce1lQ9D1G7 135 aa4.14□□□□□ -1.75
Trim55-201ENSMUST00000029139 Krtap9-5A2A5X3 358 aa4.09□□□□□ -1.75
Trim55-201ENSMUST00000029139 A030003K21RikA0A1Y7VIM3 128 aa4.09□□□□□ -1.75
Trim55-201ENSMUST00000029139 Gm6217A0A1Y7VJK9 128 aa4.09□□□□□ -1.75
Trim55-201ENSMUST00000029139 Sprr2dO70555 85 aa4.09□□□□□ -1.75
Trim55-201ENSMUST00000029139 Sprr2kO70562 68 aa4.08□□□□□ -1.76
Trim55-201ENSMUST00000029139 Lce1a1Q9CQH5 143 aa4.07□□□□□ -1.76
Trim55-201ENSMUST00000029139 Gm38119A0A0A6YX29 146 aa4.06□□□□□ -1.76
Trim55-201ENSMUST00000029139 Krtap19-9aF8WH65 55 aa4.06□□□□□ -1.76
Trim55-201ENSMUST00000029139 Gm10272F7CZ33 110 aa4.03□□□□□ -1.77
Trim55-201ENSMUST00000029139 Gm11639A0A1D5RLM8 5808 aa3.99□□□□□ -1.77
Trim55-201ENSMUST00000029139 Sprr2fO70557 76 aa3.98□□□□□ -1.77
Trim55-201ENSMUST00000029139 Krtap19-2Q925I0 141 aa3.97□□□□□ -1.77
Trim55-201ENSMUST00000029139 2300003K06RikA2A4M0 262 aa3.94□□□□□ -1.78
Trim55-201ENSMUST00000029139 Gm6358A0A087WPH4 74 aa3.88□□□□□ -1.79
Trim55-201ENSMUST00000029139 Gpr98Q8VHN7 6298 aaKnown RBP3.87□□□□□ -1.79
Trim55-201ENSMUST00000029139 Gm10100J3QK64 120 aa3.82□□□□□ -1.8
Trim55-201ENSMUST00000029139 Gm10142J3KMP7 120 aa3.79□□□□□ -1.8
Trim55-201ENSMUST00000029139 Sprr2eO70556 76 aa3.79□□□□□ -1.8
Trim55-201ENSMUST00000029139 Lce1a2Q9D1K4 149 aa3.77□□□□□ -1.81
Trim55-201ENSMUST00000029139 Fsip2A2ARZ3 6995 aa3.77□□□□□ -1.81
Trim55-201ENSMUST00000029139 Lce1cQ9D1C5 147 aa3.75□□□□□ -1.81
Trim55-201ENSMUST00000029139 Lce1iQ9D6P5 149 aa3.75□□□□□ -1.81
Trim55-201ENSMUST00000029139 Gm11559Q9D3H7 191 aa3.74□□□□□ -1.81
Trim55-201ENSMUST00000029139 Krtap22-2J3QNX6 67 aa3.65□□□□□ -1.82
Trim55-201ENSMUST00000029139 Lce1fB9EJP6 147 aa3.65□□□□□ -1.83
Trim55-201ENSMUST00000029139 Krtap5-2Q9D5Z7 189 aa3.65□□□□□ -1.83
Trim55-201ENSMUST00000029139 Krtap19-4Q925H7 84 aa3.63□□□□□ -1.83
Trim55-201ENSMUST00000029139 Sprr2hO70559 108 aa3.62□□□□□ -1.83
Trim55-201ENSMUST00000029139 Gm4553A0A1B0GSA9 284 aa3.62□□□□□ -1.83
Trim55-201ENSMUST00000029139 Lce3bQ9CQM7 98 aa3.62□□□□□ -1.83
Trim55-201ENSMUST00000029139 Lce3dE9Q8V1 98 aa3.61□□□□□ -1.83
Trim55-201ENSMUST00000029139 Kmt2dQ6PDK2 5588 aa3.6□□□□□ -1.83
Trim55-201ENSMUST00000029139 Lce3cQ91V05 98 aa3.6□□□□□ -1.83
Trim55-201ENSMUST00000029139 Krtap4-16Q91W93 202 aa3.58□□□□□ -1.84
Trim55-201ENSMUST00000029139 Lce3eF8VQJ0 98 aa3.57□□□□□ -1.84
Trim55-201ENSMUST00000029139 Lce3fQ6PAI4 98 aa3.57□□□□□ -1.84
Trim55-201ENSMUST00000029139 Lce3aQ497I5 98 aa3.52□□□□□ -1.85
Trim55-201ENSMUST00000029139 Gm10024A0A0A0MQA4 119 aa3.5□□□□□ -1.85
Trim55-201ENSMUST00000029139 Gm11554B1AQB2 190 aa3.45□□□□□ -1.86
Trim55-201ENSMUST00000029139 Mt2P02798 61 aa3.44□□□□□ -1.86
Trim55-201ENSMUST00000029139 Gm2431E9Q8S1 172 aa3.43□□□□□ -1.86
Trim55-201ENSMUST00000029139 Gm45618A0A1B0GSA0 219 aa3.42□□□□□ -1.86
Trim55-201ENSMUST00000029139 Hmcn1D3YXG0 5634 aa3.42□□□□□ -1.86
Trim55-201ENSMUST00000029139 Gm39115A0A1B0GSH7 232 aa3.41□□□□□ -1.86
Trim55-201ENSMUST00000029139 Gm45337A0A1B0GS71 263 aa3.4□□□□□ -1.87
Trim55-201ENSMUST00000029139 Syne1Q6ZWR6 8799 aa3.36□□□□□ -1.87
Trim55-201ENSMUST00000029139 Krtap9-1Q64526 186 aa3.31□□□□□ -1.88
Trim55-201ENSMUST00000029139 Gm40460A0A1B0GR10 244 aa3.29□□□□□ -1.88
Trim55-201ENSMUST00000029139 Gm7579A0A1B0GRJ4 243 aa3.29□□□□□ -1.88
Trim55-201ENSMUST00000029139 Krtap5-5Q2TA51 241 aa3.29□□□□□ -1.88
Trim55-201ENSMUST00000029139 Krtap5-4Q62220 223 aa3.29□□□□□ -1.88
Trim55-201ENSMUST00000029139 Macf1Q9QXZ0 7354 aaKnown RBP3.22□□□□□ -1.89
Trim55-201ENSMUST00000029139 Gm11568A2A4M2 211 aa3.16□□□□□ -1.9
Trim55-201ENSMUST00000029139 ObscnA2AAJ9 8891 aaKnown RBP3.13□□□□□ -1.91
Trim55-201ENSMUST00000029139 Lce1kJ3QP15 125 aa3.13□□□□□ -1.91
Trim55-201ENSMUST00000029139 AhnakE9Q616 5656 aaKnown RBP3.13□□□□□ -1.91
Trim55-201ENSMUST00000029139 Muc19Q6PZE0 7524 aa3.08□□□□□ -1.92
Trim55-201ENSMUST00000029139 Gm10153A0A1B0GRL1 320 aa3.02□□□□□ -1.93
Trim55-201ENSMUST00000029139 DstQ91ZU6 7393 aaKnown RBP2.96□□□□□ -1.94
Trim55-201ENSMUST00000029139 NebE9Q1W3 7152 aa2.89□□□□□ -1.95
Trim55-201ENSMUST00000029139 Gm11567Q9D141 195 aa2.77□□□□□ -1.97
Trim55-201ENSMUST00000029139 Gm29735A0A1B0GT06 219 aa2.71□□□□□ -1.98
Trim55-201ENSMUST00000029139 Mt1P02802 61 aaKnown RBP2.69□□□□□ -1.98
Trim55-201ENSMUST00000029139 Muc16A0A140LJ72 8478 aa2.65□□□□□ -1.99
Trim55-201ENSMUST00000029139 Mt3P28184 68 aa2.59□□□□□ -1.99
Trim55-201ENSMUST00000029139 Sprr2bO70554 98 aa2.36□□□□□ -2.03
Trim55-201ENSMUST00000029139 Phgr1Q8K0G7 91 aa2.18□□□□□ -2.06
Trim55-201ENSMUST00000029139 1110025L11RikO09048 78 aa2.14□□□□□ -2.07
Trim55-201ENSMUST00000029139 Krtap6-5Q925H3 78 aa2.14□□□□□ -2.07
Trim55-201ENSMUST00000029139 Krtap5-1Q64507 230 aa2.05□□□□□ -2.08
Trim55-201ENSMUST00000029139 Gm4559A4IF42 199 aa1.94□□□□□ -2.1
Trim55-201ENSMUST00000029139 Gm10229O08631 77 aa1.86□□□□□ -2.11
Trim55-201ENSMUST00000029139 Krtap21-1Q925H4 128 aa1.8□□□□□ -2.12
Trim55-201ENSMUST00000029139 Krtap6-2O08884 159 aa1.52□□□□□ -2.17
Retrieved 80 of 22,080 RNA–protein pairs in 83.8 ms