RNA–Protein interactions for RNA: ENSMUST00000028841.13

Usp8-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp8, Length 4,145 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8-201ENSMUST00000028841 Tnp1P10856 55 aa2.91□□□□□ -1.94
Usp8-201ENSMUST00000028841 2300003K06RikA2A4M0 262 aa2.87□□□□□ -1.95
Usp8-201ENSMUST00000028841 Krtap20-2E9Q0A8 60 aa2.87□□□□□ -1.95
Usp8-201ENSMUST00000028841 Krtap5-2Q9D5Z7 189 aa2.84□□□□□ -1.95
Usp8-201ENSMUST00000028841 A030014E15RikA0A1Y7VJV2 120 aa2.82□□□□□ -1.96
Usp8-201ENSMUST00000028841 Krtap4-7Q9D732 168 aa2.82□□□□□ -1.96
Usp8-201ENSMUST00000028841 Lce1lQ9D1G7 135 aa2.82□□□□□ -1.96
Usp8-201ENSMUST00000028841 Lce1eQ9D139 143 aa2.81□□□□□ -1.96
Usp8-201ENSMUST00000028841 Macf1Q9QXZ0 7354 aaKnown RBP2.77□□□□□ -1.97
Usp8-201ENSMUST00000028841 Gm38119A0A0A6YX29 146 aa2.76□□□□□ -1.97
Usp8-201ENSMUST00000028841 Lce1a1Q9CQH5 143 aa2.74□□□□□ -1.97
Usp8-201ENSMUST00000028841 Lce1dQ9D731 133 aa2.73□□□□□ -1.97
Usp8-201ENSMUST00000028841 Krtap22-2J3QNX6 67 aa2.73□□□□□ -1.97
Usp8-201ENSMUST00000028841 ObscnA2AAJ9 8891 aaKnown RBP2.72□□□□□ -1.97
Usp8-201ENSMUST00000028841 Gm4553A0A1B0GSA9 284 aa2.71□□□□□ -1.98
Usp8-201ENSMUST00000028841 Gm17402F6Z0L5 76 aa2.7□□□□□ -1.98
Usp8-201ENSMUST00000028841 Gm11559Q9D3H7 191 aa2.69□□□□□ -1.98
Usp8-201ENSMUST00000028841 Krtap8-1O08633 61 aa2.68□□□□□ -1.98
Usp8-201ENSMUST00000028841 4933428G20RikQ9D3X4 101 aa2.68□□□□□ -1.98
Usp8-201ENSMUST00000028841 Gm45337A0A1B0GS71 263 aa2.67□□□□□ -1.98
Usp8-201ENSMUST00000028841 Muc19Q6PZE0 7524 aa2.67□□□□□ -1.98
Usp8-201ENSMUST00000028841 Gm11568A2A4M2 211 aa2.65□□□□□ -1.99
Usp8-201ENSMUST00000028841 Gm2431E9Q8S1 172 aa2.65□□□□□ -1.99
Usp8-201ENSMUST00000028841 Krtap9-1Q64526 186 aa2.65□□□□□ -1.99
Usp8-201ENSMUST00000028841 Eppk1Q8R0W0 6548 aa2.62□□□□□ -1.99
Usp8-201ENSMUST00000028841 DstQ91ZU6 7393 aaKnown RBP2.61□□□□□ -1.99
Usp8-201ENSMUST00000028841 Gm10272F7CZ33 110 aa2.6□□□□□ -1.99
Usp8-201ENSMUST00000028841 Gm10153A0A1B0GRL1 320 aa2.58□□□□□ -2
Usp8-201ENSMUST00000028841 Gm40460A0A1B0GR10 244 aa2.57□□□□□ -2
Usp8-201ENSMUST00000028841 Gm7579A0A1B0GRJ4 243 aa2.57□□□□□ -2
Usp8-201ENSMUST00000028841 Krtap5-5Q2TA51 241 aa2.57□□□□□ -2
Usp8-201ENSMUST00000028841 Krtap5-4Q62220 223 aa2.57□□□□□ -2
Usp8-201ENSMUST00000028841 Sprr2kO70562 68 aa2.56□□□□□ -2
Usp8-201ENSMUST00000028841 Lce1cQ9D1C5 147 aa2.55□□□□□ -2
Usp8-201ENSMUST00000028841 Gm39115A0A1B0GSH7 232 aa2.54□□□□□ -2
Usp8-201ENSMUST00000028841 Gm11639A0A1D5RLM8 5808 aa2.53□□□□□ -2
Usp8-201ENSMUST00000028841 Krtap19-9bQ99NG9 58 aa2.53□□□□□ -2
Usp8-201ENSMUST00000028841 Kmt2dQ6PDK2 5588 aa2.5□□□□□ -2.01
Usp8-201ENSMUST00000028841 Gm10100J3QK64 120 aa2.46□□□□□ -2.02
Usp8-201ENSMUST00000028841 Lce1kJ3QP15 125 aa2.46□□□□□ -2.02
Usp8-201ENSMUST00000028841 Lce1fB9EJP6 147 aa2.44□□□□□ -2.02
Usp8-201ENSMUST00000028841 Krtap4-16Q91W93 202 aa2.43□□□□□ -2.02
Usp8-201ENSMUST00000028841 Krtap31-2Q8CAY5 177 aa2.42□□□□□ -2.02
Usp8-201ENSMUST00000028841 Gm11554B1AQB2 190 aa2.41□□□□□ -2.02
Usp8-201ENSMUST00000028841 Krtap31-1Q9D644 177 aa2.4□□□□□ -2.02
Usp8-201ENSMUST00000028841 2310046K23RikA0A0A6YVW6 87 aa2.4□□□□□ -2.03
Usp8-201ENSMUST00000028841 Lce3bQ9CQM7 98 aa2.39□□□□□ -2.03
Usp8-201ENSMUST00000028841 Gm45618A0A1B0GSA0 219 aa2.38□□□□□ -2.03
Usp8-201ENSMUST00000028841 Sprr2gO70558 76 aa2.38□□□□□ -2.03
Usp8-201ENSMUST00000028841 Hmcn1D3YXG0 5634 aa2.37□□□□□ -2.03
Usp8-201ENSMUST00000028841 Lce3cQ91V05 98 aa2.35□□□□□ -2.03
Usp8-201ENSMUST00000028841 Gm11938Q9D3H4 131 aa2.34□□□□□ -2.03
Usp8-201ENSMUST00000028841 Gm10142J3KMP7 120 aa2.33□□□□□ -2.04
Usp8-201ENSMUST00000028841 Lce3dE9Q8V1 98 aa2.31□□□□□ -2.04
Usp8-201ENSMUST00000028841 Sprr2iO70560 76 aa2.3□□□□□ -2.04
Usp8-201ENSMUST00000028841 Mt1P02802 61 aaKnown RBP2.27□□□□□ -2.05
Usp8-201ENSMUST00000028841 Lce3eF8VQJ0 98 aa2.23□□□□□ -2.05
Usp8-201ENSMUST00000028841 Lce3fQ6PAI4 98 aa2.23□□□□□ -2.05
Usp8-201ENSMUST00000028841 AhnakE9Q616 5656 aaKnown RBP2.2□□□□□ -2.06
Usp8-201ENSMUST00000028841 Gpr98Q8VHN7 6298 aaKnown RBP2.18□□□□□ -2.06
Usp8-201ENSMUST00000028841 NebE9Q1W3 7152 aa2.17□□□□□ -2.06
Usp8-201ENSMUST00000028841 Lce3aQ497I5 98 aa2.17□□□□□ -2.06
Usp8-201ENSMUST00000028841 Sprr2dO70555 85 aa2.14□□□□□ -2.07
Usp8-201ENSMUST00000028841 Krtap19-4Q925H7 84 aa2.02□□□□□ -2.09
Usp8-201ENSMUST00000028841 Sprr2hO70559 108 aa1.98□□□□□ -2.09
Usp8-201ENSMUST00000028841 Mt3P28184 68 aa1.96□□□□□ -2.1
Usp8-201ENSMUST00000028841 Gm10024A0A0A0MQA4 119 aa1.89□□□□□ -2.11
Usp8-201ENSMUST00000028841 Sprr2fO70557 76 aa1.89□□□□□ -2.11
Usp8-201ENSMUST00000028841 Gm29735A0A1B0GT06 219 aa1.89□□□□□ -2.11
Usp8-201ENSMUST00000028841 Sprr2eO70556 76 aa1.77□□□□□ -2.13
Usp8-201ENSMUST00000028841 Gm11567Q9D141 195 aa1.69□□□□□ -2.14
Usp8-201ENSMUST00000028841 1110025L11RikO09048 78 aa1.54□□□□□ -2.16
Usp8-201ENSMUST00000028841 Krtap6-5Q925H3 78 aa1.54□□□□□ -2.16
Usp8-201ENSMUST00000028841 Krtap5-1Q64507 230 aa1.47□□□□□ -2.17
Usp8-201ENSMUST00000028841 Gm4559A4IF42 199 aa1.4□□□□□ -2.18
Usp8-201ENSMUST00000028841 Phgr1Q8K0G7 91 aa1.36□□□□□ -2.19
Usp8-201ENSMUST00000028841 Gm10229O08631 77 aa1.35□□□□□ -2.19
Usp8-201ENSMUST00000028841 Sprr2bO70554 98 aa1.34□□□□□ -2.19
Usp8-201ENSMUST00000028841 Krtap21-1Q925H4 128 aa1.31□□□□□ -2.2
Usp8-201ENSMUST00000028841 Krtap6-2O08884 159 aa1.25□□□□□ -2.21
Retrieved 80 of 22,080 RNA–protein pairs in 70 ms