RNA–Protein interactions for RNA: ENSMUST00000026072.3

Trub1-201, Transcript of Probable tRNA pseudouridine synthase 1, mousemouse

TSL 1 (best) BASIC

Gene Trub1, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1-201ENSMUST00000026072 Lce3aQ497I5 98 aa2.85□□□□□ -1.95
Trub1-201ENSMUST00000026072 Lce1gQ9D195 139 aa2.85□□□□□ -1.95
Trub1-201ENSMUST00000026072 Lce1iQ9D6P5 149 aa2.85□□□□□ -1.95
Trub1-201ENSMUST00000026072 Lce1hQ9D6R3 140 aa2.85□□□□□ -1.95
Trub1-201ENSMUST00000026072 Syne2Q6ZWQ0 6874 aaKnown RBP2.81□□□□□ -1.96
Trub1-201ENSMUST00000026072 Lce1a2Q9D1K4 149 aa2.81□□□□□ -1.96
Trub1-201ENSMUST00000026072 Gm11562A0PK51 136 aa2.8□□□□□ -1.96
Trub1-201ENSMUST00000026072 Lce1bQ9D149 137 aa2.78□□□□□ -1.96
Trub1-201ENSMUST00000026072 Lce1fB9EJP6 147 aa2.78□□□□□ -1.96
Trub1-201ENSMUST00000026072 Lce1cQ9D1C5 147 aa2.78□□□□□ -1.96
Trub1-201ENSMUST00000026072 Lce1lQ9D1G7 135 aa2.78□□□□□ -1.96
Trub1-201ENSMUST00000026072 Lce1dQ9D731 133 aa2.78□□□□□ -1.96
Trub1-201ENSMUST00000026072 Sprr2iO70560 76 aa2.78□□□□□ -1.96
Trub1-201ENSMUST00000026072 ObscnA2AAJ9 8891 aaKnown RBP2.74□□□□□ -1.97
Trub1-201ENSMUST00000026072 Krtap4-6Q3V4B7 195 aa2.73□□□□□ -1.97
Trub1-201ENSMUST00000026072 Fsip2A2ARZ3 6995 aa2.73□□□□□ -1.97
Trub1-201ENSMUST00000026072 Gm11596B1AQB0 205 aa2.73□□□□□ -1.97
Trub1-201ENSMUST00000026072 Lce1eQ9D139 143 aa2.72□□□□□ -1.97
Trub1-201ENSMUST00000026072 Krtap9-3Q3V2C1 136 aa2.72□□□□□ -1.97
Trub1-201ENSMUST00000026072 Sprr2eO70556 76 aa2.71□□□□□ -1.98
Trub1-201ENSMUST00000026072 Macf1Q9QXZ0 7354 aaKnown RBP2.7□□□□□ -1.98
Trub1-201ENSMUST00000026072 Gm10024A0A0A0MQA4 119 aa2.68□□□□□ -1.98
Trub1-201ENSMUST00000026072 Mt4P47945 62 aa2.66□□□□□ -1.98
Trub1-201ENSMUST00000026072 A0A286YCP9 139 aa2.61□□□□□ -1.99
Trub1-201ENSMUST00000026072 Sprr2fO70557 76 aa2.59□□□□□ -1.99
Trub1-201ENSMUST00000026072 Gm11564A2A4L9 201 aa2.59□□□□□ -2
Trub1-201ENSMUST00000026072 Gm11595B1AQA7 289 aa2.59□□□□□ -2
Trub1-201ENSMUST00000026072 Krtap4-8B1AQA8 209 aa2.59□□□□□ -2
Trub1-201ENSMUST00000026072 Krtap19-4Q925H7 84 aa2.59□□□□□ -2
Trub1-201ENSMUST00000026072 Muc5bE9Q5I3 4800 aa2.58□□□□□ -2
Trub1-201ENSMUST00000026072 SspoQ8CG65 4998 aa2.56□□□□□ -2
Trub1-201ENSMUST00000026072 Krtap4-9B1AQA9 244 aa2.54□□□□□ -2
Trub1-201ENSMUST00000026072 A030014E15RikA0A1Y7VJV2 120 aa2.52□□□□□ -2.01
Trub1-201ENSMUST00000026072 Krtap4-13Q9D7P3 165 aa2.48□□□□□ -2.01
Trub1-201ENSMUST00000026072 Gm11559Q9D3H7 191 aa2.48□□□□□ -2.01
Trub1-201ENSMUST00000026072 Lce1a1Q9CQH5 143 aa2.47□□□□□ -2.01
Trub1-201ENSMUST00000026072 DstQ91ZU6 7393 aaKnown RBP2.47□□□□□ -2.01
Trub1-201ENSMUST00000026072 2300003K06RikA2A4M0 262 aa2.45□□□□□ -2.02
Trub1-201ENSMUST00000026072 Gm11938Q9D3H4 131 aa2.39□□□□□ -2.03
Trub1-201ENSMUST00000026072 Lce1kJ3QP15 125 aa2.39□□□□□ -2.03
Trub1-201ENSMUST00000026072 Sprr2hO70559 108 aa2.37□□□□□ -2.03
Trub1-201ENSMUST00000026072 Muc19Q6PZE0 7524 aa2.37□□□□□ -2.03
Trub1-201ENSMUST00000026072 Sprr2dO70555 85 aa2.36□□□□□ -2.03
Trub1-201ENSMUST00000026072 NebE9Q1W3 7152 aa2.33□□□□□ -2.04
Trub1-201ENSMUST00000026072 Krtap4-16Q91W93 202 aa2.33□□□□□ -2.04
Trub1-201ENSMUST00000026072 Krtap6-3A0A087WQL6 57 aa2.32□□□□□ -2.04
Trub1-201ENSMUST00000026072 Mt3P28184 68 aa2.21□□□□□ -2.06
Trub1-201ENSMUST00000026072 Gm11554B1AQB2 190 aa2.19□□□□□ -2.06
Trub1-201ENSMUST00000026072 Kmt2dQ6PDK2 5588 aa2.15□□□□□ -2.06
Trub1-201ENSMUST00000026072 Krtap20-2E9Q0A8 60 aa2.13□□□□□ -2.07
Trub1-201ENSMUST00000026072 Eppk1Q8R0W0 6548 aa2.11□□□□□ -2.07
Trub1-201ENSMUST00000026072 Sprr2bO70554 98 aa2.08□□□□□ -2.08
Trub1-201ENSMUST00000026072 Mt1P02802 61 aaKnown RBP2.07□□□□□ -2.08
Trub1-201ENSMUST00000026072 Gpr98Q8VHN7 6298 aaKnown RBP2.03□□□□□ -2.08
Trub1-201ENSMUST00000026072 Gm11639A0A1D5RLM8 5808 aa2.02□□□□□ -2.09
Trub1-201ENSMUST00000026072 Gm45618A0A1B0GSA0 219 aa1.89□□□□□ -2.11
Trub1-201ENSMUST00000026072 Gm11568A2A4M2 211 aa1.83□□□□□ -2.12
Trub1-201ENSMUST00000026072 Krtap9-1Q64526 186 aa1.83□□□□□ -2.12
Trub1-201ENSMUST00000026072 Hmcn1D3YXG0 5634 aa1.8□□□□□ -2.12
Trub1-201ENSMUST00000026072 Krtap5-2Q9D5Z7 189 aa1.77□□□□□ -2.13
Trub1-201ENSMUST00000026072 Gm4553A0A1B0GSA9 284 aa1.71□□□□□ -2.14
Trub1-201ENSMUST00000026072 1110025L11RikO09048 78 aa1.71□□□□□ -2.14
Trub1-201ENSMUST00000026072 Krtap6-5Q925H3 78 aa1.71□□□□□ -2.14
Trub1-201ENSMUST00000026072 Gm2431E9Q8S1 172 aa1.7□□□□□ -2.14
Trub1-201ENSMUST00000026072 Gm39115A0A1B0GSH7 232 aa1.69□□□□□ -2.14
Trub1-201ENSMUST00000026072 Gm11567Q9D141 195 aa1.64□□□□□ -2.15
Trub1-201ENSMUST00000026072 Gm29735A0A1B0GT06 219 aa1.62□□□□□ -2.15
Trub1-201ENSMUST00000026072 Gm10229O08631 77 aa1.61□□□□□ -2.15
Trub1-201ENSMUST00000026072 AhnakE9Q616 5656 aaKnown RBP1.59□□□□□ -2.16
Trub1-201ENSMUST00000026072 Phgr1Q8K0G7 91 aa1.56□□□□□ -2.16
Trub1-201ENSMUST00000026072 Gm45337A0A1B0GS71 263 aa1.56□□□□□ -2.16
Trub1-201ENSMUST00000026072 Gm10153A0A1B0GRL1 320 aa1.52□□□□□ -2.17
Trub1-201ENSMUST00000026072 Gm40460A0A1B0GR10 244 aa1.48□□□□□ -2.17
Trub1-201ENSMUST00000026072 Gm7579A0A1B0GRJ4 243 aa1.48□□□□□ -2.17
Trub1-201ENSMUST00000026072 Krtap5-5Q2TA51 241 aa1.48□□□□□ -2.17
Trub1-201ENSMUST00000026072 Krtap5-4Q62220 223 aa1.48□□□□□ -2.17
Trub1-201ENSMUST00000026072 Krtap6-2O08884 159 aa1.32□□□□□ -2.2
Trub1-201ENSMUST00000026072 Krtap5-1Q64507 230 aa1.31□□□□□ -2.2
Trub1-201ENSMUST00000026072 Gm4559A4IF42 199 aa1.28□□□□□ -2.21
Trub1-201ENSMUST00000026072 Krtap21-1Q925H4 128 aa1.25□□□□□ -2.21
Retrieved 80 of 22,080 RNA–protein pairs in 73.3 ms