RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Krtap19-9bQ99NG9 58 aa6.42□□□□□ -1.38
Trim54-201ENSMUST00000013771 Krtap5-2Q9D5Z7 189 aa6.42□□□□□ -1.38
Trim54-201ENSMUST00000013771 Gm11559Q9D3H7 191 aa6.41□□□□□ -1.38
Trim54-201ENSMUST00000013771 A030005L19RikA0A1Y7VIU2 113 aa6.38□□□□□ -1.39
Trim54-201ENSMUST00000013771 Gm20538F6Z9R1 75 aa6.35□□□□□ -1.39
Trim54-201ENSMUST00000013771 Tnp1P10856 55 aa6.35□□□□□ -1.39
Trim54-201ENSMUST00000013771 Sprr2iO70560 76 aa6.34□□□□□ -1.39
Trim54-201ENSMUST00000013771 Gm11554B1AQB2 190 aa6.33□□□□□ -1.4
Trim54-201ENSMUST00000013771 Lce1kJ3QP15 125 aa6.31□□□□□ -1.4
Trim54-201ENSMUST00000013771 Gm11639A0A1D5RLM8 5808 aa6.27□□□□□ -1.41
Trim54-201ENSMUST00000013771 Macf1Q9QXZ0 7354 aaKnown RBP6.22□□□□□ -1.41
Trim54-201ENSMUST00000013771 Kmt2dQ6PDK2 5588 aa6.18□□□□□ -1.42
Trim54-201ENSMUST00000013771 Gm4553A0A1B0GSA9 284 aa6.17□□□□□ -1.42
Trim54-201ENSMUST00000013771 Gm11568A2A4M2 211 aa6.1□□□□□ -1.43
Trim54-201ENSMUST00000013771 Krtap9-1Q64526 186 aa6.1□□□□□ -1.43
Trim54-201ENSMUST00000013771 Syne1Q6ZWR6 8799 aa6.07□□□□□ -1.44
Trim54-201ENSMUST00000013771 Lce3bQ9CQM7 98 aa6.03□□□□□ -1.44
Trim54-201ENSMUST00000013771 Gpr98Q8VHN7 6298 aaKnown RBP6□□□□□ -1.45
Trim54-201ENSMUST00000013771 Ndufaf8A2AMZ4 74 aa5.99□□□□□ -1.45
Trim54-201ENSMUST00000013771 Gm2431E9Q8S1 172 aa5.99□□□□□ -1.45
Trim54-201ENSMUST00000013771 Muc19Q6PZE0 7524 aa5.97□□□□□ -1.45
Trim54-201ENSMUST00000013771 Gm45337A0A1B0GS71 263 aa5.86□□□□□ -1.47
Trim54-201ENSMUST00000013771 Lce1fB9EJP6 147 aa5.85□□□□□ -1.47
Trim54-201ENSMUST00000013771 Gm10272F7CZ33 110 aa5.85□□□□□ -1.47
Trim54-201ENSMUST00000013771 Lce1cQ9D1C5 147 aa5.85□□□□□ -1.47
Trim54-201ENSMUST00000013771 Hmcn1D3YXG0 5634 aa5.74□□□□□ -1.49
Trim54-201ENSMUST00000013771 Krtap19-4Q925H7 84 aa5.68□□□□□ -1.5
Trim54-201ENSMUST00000013771 Gm10153A0A1B0GRL1 320 aa5.65□□□□□ -1.51
Trim54-201ENSMUST00000013771 Gm40460A0A1B0GR10 244 aa5.64□□□□□ -1.51
Trim54-201ENSMUST00000013771 Gm7579A0A1B0GRJ4 243 aa5.64□□□□□ -1.51
Trim54-201ENSMUST00000013771 Krtap5-5Q2TA51 241 aa5.64□□□□□ -1.51
Trim54-201ENSMUST00000013771 Krtap5-4Q62220 223 aa5.64□□□□□ -1.51
Trim54-201ENSMUST00000013771 Gm39115A0A1B0GSH7 232 aa5.63□□□□□ -1.51
Trim54-201ENSMUST00000013771 Gm11938Q9D3H4 131 aa5.57□□□□□ -1.52
Trim54-201ENSMUST00000013771 DstQ91ZU6 7393 aaKnown RBP5.57□□□□□ -1.52
Trim54-201ENSMUST00000013771 Mt1P02802 61 aaKnown RBP5.54□□□□□ -1.52
Trim54-201ENSMUST00000013771 NebE9Q1W3 7152 aa5.5□□□□□ -1.53
Trim54-201ENSMUST00000013771 Krtap4-16Q91W93 202 aa5.47□□□□□ -1.53
Trim54-201ENSMUST00000013771 Sprr2dO70555 85 aa5.35□□□□□ -1.55
Trim54-201ENSMUST00000013771 Sprr2fO70557 76 aa5.34□□□□□ -1.55
Trim54-201ENSMUST00000013771 Gm45618A0A1B0GSA0 219 aa5.32□□□□□ -1.56
Trim54-201ENSMUST00000013771 Lce3cQ91V05 98 aa5.31□□□□□ -1.56
Trim54-201ENSMUST00000013771 4933428G20RikQ9D3X4 101 aa5.28□□□□□ -1.56
Trim54-201ENSMUST00000013771 Gm9112A2AI92 75 aa5.26□□□□□ -1.57
Trim54-201ENSMUST00000013771 Lce3dE9Q8V1 98 aa5.21□□□□□ -1.58
Trim54-201ENSMUST00000013771 AhnakE9Q616 5656 aaKnown RBP5.19□□□□□ -1.58
Trim54-201ENSMUST00000013771 Mt3P28184 68 aa5.18□□□□□ -1.58
Trim54-201ENSMUST00000013771 Lce3eF8VQJ0 98 aa5□□□□□ -1.61
Trim54-201ENSMUST00000013771 Lce3fQ6PAI4 98 aa5□□□□□ -1.61
Trim54-201ENSMUST00000013771 ObscnA2AAJ9 8891 aaKnown RBP4.98□□□□□ -1.61
Trim54-201ENSMUST00000013771 Gm10100J3QK64 120 aa4.88□□□□□ -1.63
Trim54-201ENSMUST00000013771 A0A1Y7VLE6 161 aa4.81□□□□□ -1.64
Trim54-201ENSMUST00000013771 Lce3aQ497I5 98 aa4.78□□□□□ -1.64
Trim54-201ENSMUST00000013771 Gm10142J3KMP7 120 aa4.73□□□□□ -1.65
Trim54-201ENSMUST00000013771 Sprr2hO70559 108 aa4.62□□□□□ -1.67
Trim54-201ENSMUST00000013771 Sprr2eO70556 76 aa4.58□□□□□ -1.68
Trim54-201ENSMUST00000013771 Gm10024A0A0A0MQA4 119 aa4.38□□□□□ -1.71
Trim54-201ENSMUST00000013771 Muc16A0A140LJ72 8478 aa4.2□□□□□ -1.74
Trim54-201ENSMUST00000013771 A0A1Y7VJ07 166 aa4.13□□□□□ -1.75
Trim54-201ENSMUST00000013771 Gm29735A0A1B0GT06 219 aa4.12□□□□□ -1.75
Trim54-201ENSMUST00000013771 Krtap31-1Q9D644 177 aa4.11□□□□□ -1.75
Trim54-201ENSMUST00000013771 1110025L11RikO09048 78 aa3.89□□□□□ -1.79
Trim54-201ENSMUST00000013771 Krtap6-5Q925H3 78 aa3.89□□□□□ -1.79
Trim54-201ENSMUST00000013771 Gm11567Q9D141 195 aa3.85□□□□□ -1.79
Trim54-201ENSMUST00000013771 Gm10229O08631 77 aa3.53□□□□□ -1.85
Trim54-201ENSMUST00000013771 A030003K21RikA0A1Y7VIM3 128 aa3.42□□□□□ -1.86
Trim54-201ENSMUST00000013771 Sprr2bO70554 98 aa3.35□□□□□ -1.87
Trim54-201ENSMUST00000013771 Krtap5-1Q64507 230 aa3.34□□□□□ -1.88
Trim54-201ENSMUST00000013771 Krtap31-2Q8CAY5 177 aa3.3□□□□□ -1.88
Trim54-201ENSMUST00000013771 Krtap28-10A0A1Y7VP58 119 aa3.21□□□□□ -1.9
Trim54-201ENSMUST00000013771 Krtap6-2O08884 159 aa3.19□□□□□ -1.9
Trim54-201ENSMUST00000013771 Krtap21-1Q925H4 128 aa3.12□□□□□ -1.91
Trim54-201ENSMUST00000013771 A0A286YCP9 139 aa2.79□□□□□ -1.96
Trim54-201ENSMUST00000013771 Phgr1Q8K0G7 91 aa2.72□□□□□ -1.97
Trim54-201ENSMUST00000013771 Gm6217A0A1Y7VJK9 128 aa2.56□□□□□ -2
Trim54-201ENSMUST00000013771 Gm4559A4IF42 199 aa2.39□□□□□ -2.03
Trim54-201ENSMUST00000013771 A030005K14RikA0A1Y7VNY1 122 aa1.47□□□□□ -2.17
Trim54-201ENSMUST00000013771 Krtap28-13A0A087WQP5 138 aa1.4□□□□□ -2.18
Trim54-201ENSMUST00000013771 A030014E15RikA0A1Y7VJV2 120 aa1.18□□□□□ -2.22
Trim54-201ENSMUST00000013771 Gm7544A0A1Y7VJ58 118 aa0.92□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 109.5 ms