RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Krtap4-6Q3V4B7 195 aa3.57□□□□□ -1.84
Vps54-201ENSMUST00000006221 Gm11555B1AQ89 175 aa3.57□□□□□ -1.84
Vps54-201ENSMUST00000006221 Gm10142J3KMP7 120 aa3.56□□□□□ -1.84
Vps54-201ENSMUST00000006221 Fsip2A2ARZ3 6995 aa3.55□□□□□ -1.84
Vps54-201ENSMUST00000006221 Lce3cQ91V05 98 aa3.48□□□□□ -1.85
Vps54-201ENSMUST00000006221 Krtap4-1Q3UUY3 169 aa3.47□□□□□ -1.85
Vps54-201ENSMUST00000006221 Lce3dE9Q8V1 98 aa3.46□□□□□ -1.86
Vps54-201ENSMUST00000006221 Sprr2hO70559 108 aa3.42□□□□□ -1.86
Vps54-201ENSMUST00000006221 Lce1gQ9D195 139 aa3.42□□□□□ -1.86
Vps54-201ENSMUST00000006221 Syne2Q6ZWQ0 6874 aaKnown RBP3.42□□□□□ -1.86
Vps54-201ENSMUST00000006221 Krtap4-2B1AQ85 167 aa3.42□□□□□ -1.86
Vps54-201ENSMUST00000006221 Gm38119A0A0A6YX29 146 aa3.41□□□□□ -1.86
Vps54-201ENSMUST00000006221 Lce3eF8VQJ0 98 aa3.41□□□□□ -1.86
Vps54-201ENSMUST00000006221 Lce3fQ6PAI4 98 aa3.41□□□□□ -1.86
Vps54-201ENSMUST00000006221 ObscnA2AAJ9 8891 aaKnown RBP3.41□□□□□ -1.86
Vps54-201ENSMUST00000006221 Sprr2iO70560 76 aa3.38□□□□□ -1.87
Vps54-201ENSMUST00000006221 Mt4P47945 62 aa3.38□□□□□ -1.87
Vps54-201ENSMUST00000006221 Gm11596B1AQB0 205 aa3.35□□□□□ -1.87
Vps54-201ENSMUST00000006221 Gm11564A2A4L9 201 aa3.33□□□□□ -1.88
Vps54-201ENSMUST00000006221 Gm11563B1AQ90 168 aa3.33□□□□□ -1.88
Vps54-201ENSMUST00000006221 Gm11595B1AQA7 289 aa3.33□□□□□ -1.88
Vps54-201ENSMUST00000006221 Krtap4-8B1AQA8 209 aa3.33□□□□□ -1.88
Vps54-201ENSMUST00000006221 2300003K06RikA2A4M0 262 aa3.32□□□□□ -1.88
Vps54-201ENSMUST00000006221 Lce3aQ497I5 98 aa3.3□□□□□ -1.88
Vps54-201ENSMUST00000006221 Sprr2eO70556 76 aa3.29□□□□□ -1.88
Vps54-201ENSMUST00000006221 Krtap4-9B1AQA9 244 aa3.29□□□□□ -1.88
Vps54-201ENSMUST00000006221 Lce1bQ9D149 137 aa3.25□□□□□ -1.89
Vps54-201ENSMUST00000006221 Krtap31-1Q9D644 177 aa3.25□□□□□ -1.89
Vps54-201ENSMUST00000006221 Sprr2fO70557 76 aa3.22□□□□□ -1.89
Vps54-201ENSMUST00000006221 Krtap4-13Q9D7P3 165 aa3.2□□□□□ -1.9
Vps54-201ENSMUST00000006221 A030014E15RikA0A1Y7VJV2 120 aa3.19□□□□□ -1.9
Vps54-201ENSMUST00000006221 Lce1kJ3QP15 125 aa3.19□□□□□ -1.9
Vps54-201ENSMUST00000006221 Mt1P02802 61 aaKnown RBP3.18□□□□□ -1.9
Vps54-201ENSMUST00000006221 Lce1lQ9D1G7 135 aa3.17□□□□□ -1.9
Vps54-201ENSMUST00000006221 Krtap4-16Q91W93 202 aa3.16□□□□□ -1.9
Vps54-201ENSMUST00000006221 Sprr2kO70562 68 aa3.16□□□□□ -1.9
Vps54-201ENSMUST00000006221 Krtap4-7Q9D732 168 aa3.07□□□□□ -1.92
Vps54-201ENSMUST00000006221 Muc16A0A140LJ72 8478 aa3.06□□□□□ -1.92
Vps54-201ENSMUST00000006221 Gm11568A2A4M2 211 aa3.04□□□□□ -1.92
Vps54-201ENSMUST00000006221 Krtap9-1Q64526 186 aa3.04□□□□□ -1.92
Vps54-201ENSMUST00000006221 Macf1Q9QXZ0 7354 aaKnown RBP3.03□□□□□ -1.92
Vps54-201ENSMUST00000006221 Krtap20-2E9Q0A8 60 aa2.98□□□□□ -1.93
Vps54-201ENSMUST00000006221 Kmt2dQ6PDK2 5588 aa2.89□□□□□ -1.95
Vps54-201ENSMUST00000006221 Gm10024A0A0A0MQA4 119 aa2.87□□□□□ -1.95
Vps54-201ENSMUST00000006221 A0A286YCP9 139 aa2.87□□□□□ -1.95
Vps54-201ENSMUST00000006221 Krtap5-2Q9D5Z7 189 aa2.86□□□□□ -1.95
Vps54-201ENSMUST00000006221 Gm10153A0A1B0GRL1 320 aa2.83□□□□□ -1.96
Vps54-201ENSMUST00000006221 Hmcn1D3YXG0 5634 aa2.82□□□□□ -1.96
Vps54-201ENSMUST00000006221 Krtap6-3A0A087WQL6 57 aa2.82□□□□□ -1.96
Vps54-201ENSMUST00000006221 Mt3P28184 68 aa2.75□□□□□ -1.97
Vps54-201ENSMUST00000006221 Muc19Q6PZE0 7524 aa2.66□□□□□ -1.98
Vps54-201ENSMUST00000006221 Gm4553A0A1B0GSA9 284 aa2.61□□□□□ -1.99
Vps54-201ENSMUST00000006221 Gm45337A0A1B0GS71 263 aa2.59□□□□□ -1.99
Vps54-201ENSMUST00000006221 Gm11554B1AQB2 190 aa2.59□□□□□ -1.99
Vps54-201ENSMUST00000006221 Gm11559Q9D3H7 191 aa2.58□□□□□ -2
Vps54-201ENSMUST00000006221 Gm2431E9Q8S1 172 aa2.58□□□□□ -2
Vps54-201ENSMUST00000006221 Gm40460A0A1B0GR10 244 aa2.49□□□□□ -2.01
Vps54-201ENSMUST00000006221 Gm7579A0A1B0GRJ4 243 aa2.49□□□□□ -2.01
Vps54-201ENSMUST00000006221 Krtap5-5Q2TA51 241 aa2.49□□□□□ -2.01
Vps54-201ENSMUST00000006221 Krtap5-4Q62220 223 aa2.49□□□□□ -2.01
Vps54-201ENSMUST00000006221 1110025L11RikO09048 78 aa2.44□□□□□ -2.02
Vps54-201ENSMUST00000006221 Krtap6-5Q925H3 78 aa2.44□□□□□ -2.02
Vps54-201ENSMUST00000006221 DstQ91ZU6 7393 aaKnown RBP2.42□□□□□ -2.02
Vps54-201ENSMUST00000006221 Gm11639A0A1D5RLM8 5808 aa2.38□□□□□ -2.03
Vps54-201ENSMUST00000006221 Gm39115A0A1B0GSH7 232 aa2.37□□□□□ -2.03
Vps54-201ENSMUST00000006221 Eppk1Q8R0W0 6548 aa2.36□□□□□ -2.03
Vps54-201ENSMUST00000006221 AhnakE9Q616 5656 aaKnown RBP2.25□□□□□ -2.05
Vps54-201ENSMUST00000006221 NebE9Q1W3 7152 aa2.19□□□□□ -2.06
Vps54-201ENSMUST00000006221 Sprr2bO70554 98 aa2.16□□□□□ -2.06
Vps54-201ENSMUST00000006221 Gm10229O08631 77 aa2.15□□□□□ -2.06
Vps54-201ENSMUST00000006221 Gm45618A0A1B0GSA0 219 aa2.1□□□□□ -2.07
Vps54-201ENSMUST00000006221 Krtap31-2Q8CAY5 177 aa2.07□□□□□ -2.08
Vps54-201ENSMUST00000006221 Gm11567Q9D141 195 aa2.07□□□□□ -2.08
Vps54-201ENSMUST00000006221 Phgr1Q8K0G7 91 aa2.02□□□□□ -2.09
Vps54-201ENSMUST00000006221 Krtap21-1Q925H4 128 aa2.02□□□□□ -2.09
Vps54-201ENSMUST00000006221 Gpr98Q8VHN7 6298 aaKnown RBP1.96□□□□□ -2.1
Vps54-201ENSMUST00000006221 Gm29735A0A1B0GT06 219 aa1.89□□□□□ -2.11
Vps54-201ENSMUST00000006221 Krtap6-2O08884 159 aa1.8□□□□□ -2.12
Vps54-201ENSMUST00000006221 Krtap5-1Q64507 230 aa1.41□□□□□ -2.18
Vps54-201ENSMUST00000006221 Gm4559A4IF42 199 aa1.32□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 227.9 ms