RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Sprr2gO70558 76 aa4.44□□□□□ -1.7
Ufd1-201ENSMUST00000005394 A0A1Y7VJ07 166 aa4.42□□□□□ -1.7
Ufd1-201ENSMUST00000005394 Lce1dQ9D731 133 aa4.42□□□□□ -1.7
Ufd1-201ENSMUST00000005394 Mt2P02798 61 aa4.41□□□□□ -1.7
Ufd1-201ENSMUST00000005394 Krtap4-13Q9D7P3 165 aa4.39□□□□□ -1.71
Ufd1-201ENSMUST00000005394 Krtap6-3A0A087WQL6 57 aa4.34□□□□□ -1.71
Ufd1-201ENSMUST00000005394 Sprr2dO70555 85 aa4.34□□□□□ -1.71
Ufd1-201ENSMUST00000005394 Gm11938Q9D3H4 131 aa4.32□□□□□ -1.72
Ufd1-201ENSMUST00000005394 Sprr2kO70562 68 aa4.3□□□□□ -1.72
Ufd1-201ENSMUST00000005394 Lce1bQ9D149 137 aa4.28□□□□□ -1.72
Ufd1-201ENSMUST00000005394 Lce1eQ9D139 143 aa4.26□□□□□ -1.73
Ufd1-201ENSMUST00000005394 Krtap31-2Q8CAY5 177 aa4.25□□□□□ -1.73
Ufd1-201ENSMUST00000005394 Gm38119A0A0A6YX29 146 aa4.23□□□□□ -1.73
Ufd1-201ENSMUST00000005394 2300003K06RikA2A4M0 262 aa4.22□□□□□ -1.73
Ufd1-201ENSMUST00000005394 Lce1lQ9D1G7 135 aa4.22□□□□□ -1.73
Ufd1-201ENSMUST00000005394 Krtap22-2J3QNX6 67 aa4.2□□□□□ -1.74
Ufd1-201ENSMUST00000005394 Krtap31-1Q9D644 177 aa4.14□□□□□ -1.75
Ufd1-201ENSMUST00000005394 Sprr2iO70560 76 aa4.09□□□□□ -1.76
Ufd1-201ENSMUST00000005394 A030014E15RikA0A1Y7VJV2 120 aa4.07□□□□□ -1.76
Ufd1-201ENSMUST00000005394 Lce1a1Q9CQH5 143 aa4□□□□□ -1.77
Ufd1-201ENSMUST00000005394 Gm10272F7CZ33 110 aa3.98□□□□□ -1.77
Ufd1-201ENSMUST00000005394 Krtap19-4Q925H7 84 aa3.98□□□□□ -1.77
Ufd1-201ENSMUST00000005394 Krtap20-2E9Q0A8 60 aa3.96□□□□□ -1.77
Ufd1-201ENSMUST00000005394 Lce1cQ9D1C5 147 aa3.95□□□□□ -1.78
Ufd1-201ENSMUST00000005394 Gm10100J3QK64 120 aa3.89□□□□□ -1.79
Ufd1-201ENSMUST00000005394 Gm10142J3KMP7 120 aa3.85□□□□□ -1.79
Ufd1-201ENSMUST00000005394 Sprr2fO70557 76 aa3.85□□□□□ -1.79
Ufd1-201ENSMUST00000005394 Sprr2eO70556 76 aa3.83□□□□□ -1.8
Ufd1-201ENSMUST00000005394 Lce3bQ9CQM7 98 aa3.83□□□□□ -1.8
Ufd1-201ENSMUST00000005394 Lce1fB9EJP6 147 aa3.82□□□□□ -1.8
Ufd1-201ENSMUST00000005394 Sprr2hO70559 108 aa3.79□□□□□ -1.8
Ufd1-201ENSMUST00000005394 Krtap5-2Q9D5Z7 189 aa3.71□□□□□ -1.82
Ufd1-201ENSMUST00000005394 Lce1kJ3QP15 125 aa3.7□□□□□ -1.82
Ufd1-201ENSMUST00000005394 Lce3dE9Q8V1 98 aa3.69□□□□□ -1.82
Ufd1-201ENSMUST00000005394 Lce3cQ91V05 98 aa3.69□□□□□ -1.82
Ufd1-201ENSMUST00000005394 Eppk1Q8R0W0 6548 aa3.69□□□□□ -1.82
Ufd1-201ENSMUST00000005394 Gm11559Q9D3H7 191 aa3.66□□□□□ -1.82
Ufd1-201ENSMUST00000005394 Syne1Q6ZWR6 8799 aa3.64□□□□□ -1.83
Ufd1-201ENSMUST00000005394 Lce3eF8VQJ0 98 aa3.64□□□□□ -1.83
Ufd1-201ENSMUST00000005394 Lce3fQ6PAI4 98 aa3.64□□□□□ -1.83
Ufd1-201ENSMUST00000005394 Macf1Q9QXZ0 7354 aaKnown RBP3.63□□□□□ -1.83
Ufd1-201ENSMUST00000005394 Gm11554B1AQB2 190 aa3.62□□□□□ -1.83
Ufd1-201ENSMUST00000005394 Lce3aQ497I5 98 aa3.58□□□□□ -1.84
Ufd1-201ENSMUST00000005394 Gm11568A2A4M2 211 aa3.57□□□□□ -1.84
Ufd1-201ENSMUST00000005394 Krtap9-1Q64526 186 aa3.57□□□□□ -1.84
Ufd1-201ENSMUST00000005394 Kmt2dQ6PDK2 5588 aa3.55□□□□□ -1.84
Ufd1-201ENSMUST00000005394 Gm4553A0A1B0GSA9 284 aa3.54□□□□□ -1.84
Ufd1-201ENSMUST00000005394 Gm11639A0A1D5RLM8 5808 aa3.49□□□□□ -1.85
Ufd1-201ENSMUST00000005394 ObscnA2AAJ9 8891 aaKnown RBP3.47□□□□□ -1.85
Ufd1-201ENSMUST00000005394 Gm2431E9Q8S1 172 aa3.45□□□□□ -1.86
Ufd1-201ENSMUST00000005394 Muc19Q6PZE0 7524 aa3.41□□□□□ -1.86
Ufd1-201ENSMUST00000005394 Gm45337A0A1B0GS71 263 aa3.39□□□□□ -1.87
Ufd1-201ENSMUST00000005394 Hmcn1D3YXG0 5634 aa3.36□□□□□ -1.87
Ufd1-201ENSMUST00000005394 Krtap4-16Q91W93 202 aa3.34□□□□□ -1.88
Ufd1-201ENSMUST00000005394 Gpr98Q8VHN7 6298 aaKnown RBP3.32□□□□□ -1.88
Ufd1-201ENSMUST00000005394 Gm10153A0A1B0GRL1 320 aa3.31□□□□□ -1.88
Ufd1-201ENSMUST00000005394 Mt1P02802 61 aaKnown RBP3.3□□□□□ -1.88
Ufd1-201ENSMUST00000005394 Gm40460A0A1B0GR10 244 aa3.26□□□□□ -1.89
Ufd1-201ENSMUST00000005394 Gm7579A0A1B0GRJ4 243 aa3.26□□□□□ -1.89
Ufd1-201ENSMUST00000005394 Krtap5-5Q2TA51 241 aa3.26□□□□□ -1.89
Ufd1-201ENSMUST00000005394 Krtap5-4Q62220 223 aa3.26□□□□□ -1.89
Ufd1-201ENSMUST00000005394 Gm39115A0A1B0GSH7 232 aa3.22□□□□□ -1.89
Ufd1-201ENSMUST00000005394 DstQ91ZU6 7393 aaKnown RBP3.22□□□□□ -1.89
Ufd1-201ENSMUST00000005394 NebE9Q1W3 7152 aa3.14□□□□□ -1.91
Ufd1-201ENSMUST00000005394 Gm45618A0A1B0GSA0 219 aa3.14□□□□□ -1.91
Ufd1-201ENSMUST00000005394 Gm10024A0A0A0MQA4 119 aa3.11□□□□□ -1.91
Ufd1-201ENSMUST00000005394 Mt3P28184 68 aa3.06□□□□□ -1.92
Ufd1-201ENSMUST00000005394 AhnakE9Q616 5656 aaKnown RBP3□□□□□ -1.93
Ufd1-201ENSMUST00000005394 Gm11567Q9D141 195 aa2.66□□□□□ -1.98
Ufd1-201ENSMUST00000005394 Sprr2bO70554 98 aa2.58□□□□□ -2
Ufd1-201ENSMUST00000005394 Gm29735A0A1B0GT06 219 aa2.57□□□□□ -2
Ufd1-201ENSMUST00000005394 1110025L11RikO09048 78 aa2.56□□□□□ -2
Ufd1-201ENSMUST00000005394 Krtap6-5Q925H3 78 aa2.56□□□□□ -2
Ufd1-201ENSMUST00000005394 Muc16A0A140LJ72 8478 aa2.53□□□□□ -2
Ufd1-201ENSMUST00000005394 Krtap5-1Q64507 230 aa2.25□□□□□ -2.05
Ufd1-201ENSMUST00000005394 Gm10229O08631 77 aa2.23□□□□□ -2.05
Ufd1-201ENSMUST00000005394 Phgr1Q8K0G7 91 aa2.21□□□□□ -2.06
Ufd1-201ENSMUST00000005394 Gm4559A4IF42 199 aa2.17□□□□□ -2.06
Ufd1-201ENSMUST00000005394 Krtap21-1Q925H4 128 aa2.13□□□□□ -2.07
Ufd1-201ENSMUST00000005394 Krtap6-2O08884 159 aa1.9□□□□□ -2.11
Retrieved 80 of 22,080 RNA–protein pairs in 93.6 ms