RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Fat1A0A1L1SQU7 4645 aa7.69□□□□□ -1.18
Upf1-202ENSMUST00000215817 Ryr2E9Q401 4966 aaKnown RBP7.67□□□□□ -1.18
Upf1-202ENSMUST00000215817 Lrp1Q91ZX7 4545 aaKnown RBP7.67□□□□□ -1.18
Upf1-202ENSMUST00000215817 Gm40193A0A1B0GT39 78 aa7.6□□□□□ -1.19
Upf1-202ENSMUST00000215817 2210017I01RikA0A0A6YVV1 95 aa7.58□□□□□ -1.2
Upf1-202ENSMUST00000215817 SacsQ9JLC8 4582 aa7.58□□□□□ -1.2
Upf1-202ENSMUST00000215817 Dnah2P0C6F1 4456 aa7.58□□□□□ -1.2
Upf1-202ENSMUST00000215817 Pkd1O08852 4293 aa7.57□□□□□ -1.2
Upf1-202ENSMUST00000215817 Lrp2A2ARV4 4660 aa7.57□□□□□ -1.2
Upf1-202ENSMUST00000215817 Lce1mQ9CR91 182 aa7.57□□□□□ -1.2
Upf1-202ENSMUST00000215817 Dnah7cA0A087WR13 4024 aa7.54□□□□□ -1.2
Upf1-202ENSMUST00000215817 Krtap3-2Q9D638 99 aa7.54□□□□□ -1.2
Upf1-202ENSMUST00000215817 Krtap3-3Q9D7P0 99 aa7.54□□□□□ -1.2
Upf1-202ENSMUST00000215817 Fat3Q8BNA6 4555 aa7.54□□□□□ -1.2
Upf1-202ENSMUST00000215817 Dnah7aE9Q0T8 4024 aa7.51□□□□□ -1.21
Upf1-202ENSMUST00000215817 Krtap13-1Q8K198 168 aa7.5□□□□□ -1.21
Upf1-202ENSMUST00000215817 Dnah8Q91XQ0 4731 aa7.44□□□□□ -1.22
Upf1-202ENSMUST00000215817 B930094E09RikQ8C4T2 136 aa7.42□□□□□ -1.22
Upf1-202ENSMUST00000215817 LorP18165 486 aa7.36□□□□□ -1.23
Upf1-202ENSMUST00000215817 Hectd4E9Q2E4 4418 aa7.36□□□□□ -1.23
Upf1-202ENSMUST00000215817 Tnp1P10856 55 aa7.34□□□□□ -1.23
Upf1-202ENSMUST00000215817 Abca13Q5SSE9 5034 aa7.27□□□□□ -1.25
Upf1-202ENSMUST00000215817 Dnhd1D3Z2X2 4750 aa7.25□□□□□ -1.25
Upf1-202ENSMUST00000215817 Krtap3-1A2A591 98 aa7.18□□□□□ -1.26
Upf1-202ENSMUST00000215817 Birc6O88738 4882 aa7.17□□□□□ -1.26
Upf1-202ENSMUST00000215817 Gm19402J3QJV4 266 aa7.12□□□□□ -1.27
Upf1-202ENSMUST00000215817 Fat2Q5F226 4351 aa7.1□□□□□ -1.27
Upf1-202ENSMUST00000215817 PcloQ9QYX7 5068 aa7.07□□□□□ -1.28
Upf1-202ENSMUST00000215817 Kmt2cQ8BRH4 4903 aa7.06□□□□□ -1.28
Upf1-202ENSMUST00000215817 Prm1P02319 51 aa7.03□□□□□ -1.28
Upf1-202ENSMUST00000215817 Herc1E9PZP8 4859 aa7.02□□□□□ -1.29
Upf1-202ENSMUST00000215817 Vps13bQ80TY5 3993 aa7.02□□□□□ -1.29
Upf1-202ENSMUST00000215817 Krtap1-5A2A590 122 aa6.97□□□□□ -1.29
Upf1-202ENSMUST00000215817 Gm7735D3YX18 52 aa6.95□□□□□ -1.3
Upf1-202ENSMUST00000215817 Gm17402F6Z0L5 76 aa6.88□□□□□ -1.31
Upf1-202ENSMUST00000215817 Krtap16-3Q8C1I6 86 aa6.88□□□□□ -1.31
Upf1-202ENSMUST00000215817 Krtap19-3Q925H6 87 aa6.86□□□□□ -1.31
Upf1-202ENSMUST00000215817 Gm19668J3QMD1 248 aa6.83□□□□□ -1.32
Upf1-202ENSMUST00000215817 Gm9789Q8BIG3 52 aa6.81□□□□□ -1.32
Upf1-202ENSMUST00000215817 Krtap1-4Q3V2D6 188 aa6.81□□□□□ -1.32
Upf1-202ENSMUST00000215817 Ubr4A2AN08 5180 aa6.81□□□□□ -1.32
Upf1-202ENSMUST00000215817 Pkhd1E9PZ36 4059 aa6.8□□□□□ -1.32
Upf1-202ENSMUST00000215817 Pkhd1l1Q80ZA4 4249 aa6.79□□□□□ -1.32
Upf1-202ENSMUST00000215817 Krtap19-1Q925H2 87 aa6.76□□□□□ -1.33
Upf1-202ENSMUST00000215817 4932415D10RikA0A1W2P6U8 4986 aa6.75□□□□□ -1.33
Upf1-202ENSMUST00000215817 Krtap1-3A2A588 173 aa6.75□□□□□ -1.33
Upf1-202ENSMUST00000215817 Krtap19-9aF8WH65 55 aa6.72□□□□□ -1.33
Upf1-202ENSMUST00000215817 Krtap12-1Q9Z287 130 aa6.7□□□□□ -1.34
Upf1-202ENSMUST00000215817 Krtap7-1Q9D3I6 87 aa6.66□□□□□ -1.34
Upf1-202ENSMUST00000215817 Ush2AQ2QI47 5193 aa6.64□□□□□ -1.35
Upf1-202ENSMUST00000215817 Mdn1A2ANY6 5589 aaKnown RBP6.56□□□□□ -1.36
Upf1-202ENSMUST00000215817 Krtap9-5A2A5X3 358 aa6.53□□□□□ -1.36
Upf1-202ENSMUST00000215817 Sprr2a3Q4KL71 83 aa6.52□□□□□ -1.37
Upf1-202ENSMUST00000215817 Sprr2a1Q9CQK8 83 aa6.52□□□□□ -1.37
Upf1-202ENSMUST00000215817 Krtap8-1O08633 61 aa6.48□□□□□ -1.37
Upf1-202ENSMUST00000215817 4933428G20RikQ9D3X4 101 aa6.45□□□□□ -1.38
Upf1-202ENSMUST00000215817 Fat4Q2PZL6 4981 aa6.44□□□□□ -1.38
Upf1-202ENSMUST00000215817 Gm10061D3Z714 54 aa6.39□□□□□ -1.39
Upf1-202ENSMUST00000215817 Rnf213E9Q555 5152 aaKnown RBP6.39□□□□□ -1.39
Upf1-202ENSMUST00000215817 ZanO88799 5376 aa6.37□□□□□ -1.39
Upf1-202ENSMUST00000215817 Sprr2kO70562 68 aa6.33□□□□□ -1.4
Upf1-202ENSMUST00000215817 Hmcn2A2AJ76 5100 aa6.28□□□□□ -1.4
Upf1-202ENSMUST00000215817 Krtap19-2Q925I0 141 aa6.28□□□□□ -1.4
Upf1-202ENSMUST00000215817 Gm11569B1AQB1 180 aa6.27□□□□□ -1.4
Upf1-202ENSMUST00000215817 Lce1jD3YUU5 139 aa6.27□□□□□ -1.4
Upf1-202ENSMUST00000215817 Gm6358A0A087WPH4 74 aa6.24□□□□□ -1.41
Upf1-202ENSMUST00000215817 Krtap19-9bQ99NG9 58 aa6.18□□□□□ -1.42
Upf1-202ENSMUST00000215817 Mt2P02798 61 aa6.07□□□□□ -1.44
Upf1-202ENSMUST00000215817 Krtap4-2B1AQ85 167 aa6.07□□□□□ -1.44
Upf1-202ENSMUST00000215817 Krtap4-6Q3V4B7 195 aa5.92□□□□□ -1.46
Upf1-202ENSMUST00000215817 Krtap17-1A2A5X6 109 aa5.91□□□□□ -1.46
Upf1-202ENSMUST00000215817 Lce1gQ9D195 139 aa5.91□□□□□ -1.46
Upf1-202ENSMUST00000215817 Sprr2gO70558 76 aa5.91□□□□□ -1.46
Upf1-202ENSMUST00000215817 Krtap22-2J3QNX6 67 aa5.9□□□□□ -1.46
Upf1-202ENSMUST00000215817 Gm38119A0A0A6YX29 146 aa5.88□□□□□ -1.47
Upf1-202ENSMUST00000215817 Fsip2A2ARZ3 6995 aa5.82□□□□□ -1.48
Upf1-202ENSMUST00000215817 Lce1iQ9D6P5 149 aa5.78□□□□□ -1.48
Upf1-202ENSMUST00000215817 Mt4P47945 62 aa5.72□□□□□ -1.49
Upf1-202ENSMUST00000215817 Muc5bE9Q5I3 4800 aa5.72□□□□□ -1.49
Upf1-202ENSMUST00000215817 Krtap4-1Q3UUY3 169 aa5.71□□□□□ -1.5
Upf1-202ENSMUST00000215817 Gm11596B1AQB0 205 aa5.7□□□□□ -1.5
Upf1-202ENSMUST00000215817 Lce1a2Q9D1K4 149 aa5.69□□□□□ -1.5
Upf1-202ENSMUST00000215817 Syne2Q6ZWQ0 6874 aaKnown RBP5.68□□□□□ -1.5
Upf1-202ENSMUST00000215817 Gm10272F7CZ33 110 aa5.63□□□□□ -1.51
Upf1-202ENSMUST00000215817 Lce3bQ9CQM7 98 aa5.61□□□□□ -1.51
Upf1-202ENSMUST00000215817 Gm11564A2A4L9 201 aa5.57□□□□□ -1.52
Upf1-202ENSMUST00000215817 Gm11563B1AQ90 168 aa5.57□□□□□ -1.52
Upf1-202ENSMUST00000215817 Gm11595B1AQA7 289 aa5.57□□□□□ -1.52
Upf1-202ENSMUST00000215817 Krtap4-8B1AQA8 209 aa5.57□□□□□ -1.52
Upf1-202ENSMUST00000215817 Krtap4-9B1AQA9 244 aa5.52□□□□□ -1.53
Upf1-202ENSMUST00000215817 SspoQ8CG65 4998 aa5.52□□□□□ -1.53
Upf1-202ENSMUST00000215817 2310046K23RikA0A0A6YVW6 87 aa5.52□□□□□ -1.53
Upf1-202ENSMUST00000215817 Krtap9-3Q3V2C1 136 aa5.52□□□□□ -1.53
Upf1-202ENSMUST00000215817 Lce1lQ9D1G7 135 aa5.43□□□□□ -1.54
Upf1-202ENSMUST00000215817 Syne1Q6ZWR6 8799 aa5.4□□□□□ -1.55
Upf1-202ENSMUST00000215817 Lce3cQ91V05 98 aa5.38□□□□□ -1.55
Upf1-202ENSMUST00000215817 Krtap4-13Q9D7P3 165 aa5.37□□□□□ -1.55
Upf1-202ENSMUST00000215817 Sprr2iO70560 76 aa5.36□□□□□ -1.55
Upf1-202ENSMUST00000215817 Gm11562A0PK51 136 aa5.33□□□□□ -1.56
Upf1-202ENSMUST00000215817 Gm10100J3QK64 120 aa5.32□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 73.9 ms