RNA–Protein interactions for RNA: ENSMUST00000215510.1

Usp47-206, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

TSL 5 BASIC

Gene Usp47, Length 4,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-206ENSMUST00000215510 Gm17402F6Z0L5 76 aa4.86□□□□□ -1.63
Usp47-206ENSMUST00000215510 PrkdcP97313 4128 aa4.85□□□□□ -1.63
Usp47-206ENSMUST00000215510 Mycbp2Q7TPH6 4711 aa4.83□□□□□ -1.64
Usp47-206ENSMUST00000215510 Pkhd1E9PZ36 4059 aa4.83□□□□□ -1.64
Usp47-206ENSMUST00000215510 Dnah2P0C6F1 4456 aa4.82□□□□□ -1.64
Usp47-206ENSMUST00000215510 Gm19668J3QMD1 248 aa4.81□□□□□ -1.64
Usp47-206ENSMUST00000215510 Gm18596A0A1W2P860 280 aa4.8□□□□□ -1.64
Usp47-206ENSMUST00000215510 Pkd1O08852 4293 aa4.79□□□□□ -1.64
Usp47-206ENSMUST00000215510 Gm9112A2AI92 75 aa4.75□□□□□ -1.65
Usp47-206ENSMUST00000215510 HydinQ80W93 5154 aa4.74□□□□□ -1.65
Usp47-206ENSMUST00000215510 ApobE9Q414 4505 aa4.74□□□□□ -1.65
Usp47-206ENSMUST00000215510 LorP18165 486 aa4.73□□□□□ -1.65
Usp47-206ENSMUST00000215510 Vps13bQ80TY5 3993 aa4.72□□□□□ -1.65
Usp47-206ENSMUST00000215510 Ryr3A2AGL3 4863 aa4.71□□□□□ -1.66
Usp47-206ENSMUST00000215510 SacsQ9JLC8 4582 aa4.68□□□□□ -1.66
Usp47-206ENSMUST00000215510 Kiaa1109A2AAE1 5005 aa4.64□□□□□ -1.67
Usp47-206ENSMUST00000215510 Dync1h1Q9JHU4 4644 aaKnown RBP4.63□□□□□ -1.67
Usp47-206ENSMUST00000215510 Lrp1bQ9JI18 4599 aa4.62□□□□□ -1.67
Usp47-206ENSMUST00000215510 Krtap1-5A2A590 122 aa4.58□□□□□ -1.68
Usp47-206ENSMUST00000215510 Herc2Q4U2R1 4836 aa4.58□□□□□ -1.68
Usp47-206ENSMUST00000215510 Fat3Q8BNA6 4555 aa4.56□□□□□ -1.68
Usp47-206ENSMUST00000215510 Lrp2A2ARV4 4660 aa4.56□□□□□ -1.68
Usp47-206ENSMUST00000215510 Gm19402J3QJV4 266 aa4.56□□□□□ -1.68
Usp47-206ENSMUST00000215510 Lrp1Q91ZX7 4545 aaKnown RBP4.55□□□□□ -1.68
Usp47-206ENSMUST00000215510 Pkhd1l1Q80ZA4 4249 aa4.54□□□□□ -1.68
Usp47-206ENSMUST00000215510 Fat2Q5F226 4351 aa4.54□□□□□ -1.68
Usp47-206ENSMUST00000215510 Krtap1-4Q3V2D6 188 aa4.51□□□□□ -1.69
Usp47-206ENSMUST00000215510 Dnah8Q91XQ0 4731 aa4.51□□□□□ -1.69
Usp47-206ENSMUST00000215510 Krtap19-9aF8WH65 55 aa4.49□□□□□ -1.69
Usp47-206ENSMUST00000215510 Lce1mQ9CR91 182 aa4.48□□□□□ -1.69
Usp47-206ENSMUST00000215510 Gm6358A0A087WPH4 74 aa4.48□□□□□ -1.69
Usp47-206ENSMUST00000215510 Sprr2a3Q4KL71 83 aa4.46□□□□□ -1.7
Usp47-206ENSMUST00000215510 Sprr2a1Q9CQK8 83 aa4.46□□□□□ -1.7
Usp47-206ENSMUST00000215510 Fat1A0A1L1SQU7 4645 aa4.46□□□□□ -1.7
Usp47-206ENSMUST00000215510 4933428G20RikQ9D3X4 101 aa4.42□□□□□ -1.7
Usp47-206ENSMUST00000215510 Krtap12-1Q9Z287 130 aa4.42□□□□□ -1.7
Usp47-206ENSMUST00000215510 Krtap8-1O08633 61 aa4.4□□□□□ -1.71
Usp47-206ENSMUST00000215510 Krtap7-1Q9D3I6 87 aa4.33□□□□□ -1.72
Usp47-206ENSMUST00000215510 Krtap16-3Q8C1I6 86 aa4.32□□□□□ -1.72
Usp47-206ENSMUST00000215510 Sprr2kO70562 68 aa4.31□□□□□ -1.72
Usp47-206ENSMUST00000215510 Krtap19-3Q925H6 87 aa4.31□□□□□ -1.72
Usp47-206ENSMUST00000215510 PcloQ9QYX7 5068 aa4.31□□□□□ -1.72
Usp47-206ENSMUST00000215510 Krtap19-9bQ99NG9 58 aa4.26□□□□□ -1.73
Usp47-206ENSMUST00000215510 Ryr2E9Q401 4966 aaKnown RBP4.25□□□□□ -1.73
Usp47-206ENSMUST00000215510 Kmt2cQ8BRH4 4903 aa4.25□□□□□ -1.73
Usp47-206ENSMUST00000215510 Mdn1A2ANY6 5589 aaKnown RBP4.25□□□□□ -1.73
Usp47-206ENSMUST00000215510 Krtap19-1Q925H2 87 aa4.23□□□□□ -1.73
Usp47-206ENSMUST00000215510 Krtap9-5A2A5X3 358 aa4.22□□□□□ -1.73
Usp47-206ENSMUST00000215510 Prm1P02319 51 aa4.19□□□□□ -1.74
Usp47-206ENSMUST00000215510 Dnhd1D3Z2X2 4750 aa4.17□□□□□ -1.74
Usp47-206ENSMUST00000215510 Gm7735D3YX18 52 aa4.13□□□□□ -1.75
Usp47-206ENSMUST00000215510 Abca13Q5SSE9 5034 aa4.09□□□□□ -1.75
Usp47-206ENSMUST00000215510 Krtap1-3A2A588 173 aa4.09□□□□□ -1.76
Usp47-206ENSMUST00000215510 Birc6O88738 4882 aa4.07□□□□□ -1.76
Usp47-206ENSMUST00000215510 Sprr2gO70558 76 aa4.01□□□□□ -1.77
Usp47-206ENSMUST00000215510 Herc1E9PZP8 4859 aa4.01□□□□□ -1.77
Usp47-206ENSMUST00000215510 Gm9789Q8BIG3 52 aa4□□□□□ -1.77
Usp47-206ENSMUST00000215510 Krtap19-2Q925I0 141 aa3.98□□□□□ -1.77
Usp47-206ENSMUST00000215510 Lce1jD3YUU5 139 aa3.98□□□□□ -1.77
Usp47-206ENSMUST00000215510 Mt2P02798 61 aa3.98□□□□□ -1.77
Usp47-206ENSMUST00000215510 Ubr4A2AN08 5180 aa3.96□□□□□ -1.78
Usp47-206ENSMUST00000215510 Syne1Q6ZWR6 8799 aa3.94□□□□□ -1.78
Usp47-206ENSMUST00000215510 4932415D10RikA0A1W2P6U8 4986 aa3.93□□□□□ -1.78
Usp47-206ENSMUST00000215510 Rnf213E9Q555 5152 aaKnown RBP3.93□□□□□ -1.78
Usp47-206ENSMUST00000215510 Krtap22-2J3QNX6 67 aa3.91□□□□□ -1.78
Usp47-206ENSMUST00000215510 Gm10272F7CZ33 110 aa3.88□□□□□ -1.79
Usp47-206ENSMUST00000215510 Gm10061D3Z714 54 aa3.88□□□□□ -1.79
Usp47-206ENSMUST00000215510 Gm38119A0A0A6YX29 146 aa3.88□□□□□ -1.79
Usp47-206ENSMUST00000215510 Lce3bQ9CQM7 98 aa3.87□□□□□ -1.79
Usp47-206ENSMUST00000215510 Lce3cQ91V05 98 aa3.81□□□□□ -1.8
Usp47-206ENSMUST00000215510 Fat4Q2PZL6 4981 aa3.81□□□□□ -1.8
Usp47-206ENSMUST00000215510 Gm11569B1AQB1 180 aa3.81□□□□□ -1.8
Usp47-206ENSMUST00000215510 Ush2AQ2QI47 5193 aa3.74□□□□□ -1.81
Usp47-206ENSMUST00000215510 Gm10100J3QK64 120 aa3.74□□□□□ -1.81
Usp47-206ENSMUST00000215510 ZanO88799 5376 aa3.72□□□□□ -1.81
Usp47-206ENSMUST00000215510 Muc16A0A140LJ72 8478 aa3.71□□□□□ -1.82
Usp47-206ENSMUST00000215510 2310046K23RikA0A0A6YVW6 87 aa3.7□□□□□ -1.82
Usp47-206ENSMUST00000215510 Lce3eF8VQJ0 98 aa3.68□□□□□ -1.82
Usp47-206ENSMUST00000215510 Lce3fQ6PAI4 98 aa3.68□□□□□ -1.82
Usp47-206ENSMUST00000215510 Krtap4-2B1AQ85 167 aa3.65□□□□□ -1.82
Usp47-206ENSMUST00000215510 Krtap4-6Q3V4B7 195 aa3.64□□□□□ -1.83
Usp47-206ENSMUST00000215510 Lce1iQ9D6P5 149 aa3.64□□□□□ -1.83
Usp47-206ENSMUST00000215510 Hmcn2A2AJ76 5100 aa3.63□□□□□ -1.83
Usp47-206ENSMUST00000215510 Fsip2A2ARZ3 6995 aa3.62□□□□□ -1.83
Usp47-206ENSMUST00000215510 Krtap17-1A2A5X6 109 aa3.61□□□□□ -1.83
Usp47-206ENSMUST00000215510 Mt4P47945 62 aa3.61□□□□□ -1.83
Usp47-206ENSMUST00000215510 Sprr2iO70560 76 aa3.6□□□□□ -1.83
Usp47-206ENSMUST00000215510 Lce3dE9Q8V1 98 aa3.59□□□□□ -1.83
Usp47-206ENSMUST00000215510 Gm10142J3KMP7 120 aa3.58□□□□□ -1.84
Usp47-206ENSMUST00000215510 Lce1bQ9D149 137 aa3.58□□□□□ -1.84
Usp47-206ENSMUST00000215510 Lce1gQ9D195 139 aa3.58□□□□□ -1.84
Usp47-206ENSMUST00000215510 Lce1hQ9D6R3 140 aa3.58□□□□□ -1.84
Usp47-206ENSMUST00000215510 Lce1a2Q9D1K4 149 aa3.58□□□□□ -1.84
Usp47-206ENSMUST00000215510 Lce1fB9EJP6 147 aa3.56□□□□□ -1.84
Usp47-206ENSMUST00000215510 Lce1cQ9D1C5 147 aa3.56□□□□□ -1.84
Usp47-206ENSMUST00000215510 Lce1lQ9D1G7 135 aa3.56□□□□□ -1.84
Usp47-206ENSMUST00000215510 Lce1dQ9D731 133 aa3.56□□□□□ -1.84
Usp47-206ENSMUST00000215510 Lce3aQ497I5 98 aa3.55□□□□□ -1.84
Usp47-206ENSMUST00000215510 Krtap4-1Q3UUY3 169 aa3.48□□□□□ -1.85
Usp47-206ENSMUST00000215510 Krtap9-3Q3V2C1 136 aa3.47□□□□□ -1.85
Retrieved 100 of 22,080 RNA–protein pairs in 81.3 ms