RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Gm10577Q3UDV9 132 aa4.29□□□□□ -1.72
Trim40-203ENSMUST00000172711 MplkipQ9D011 178 aa4.29□□□□□ -1.72
Trim40-203ENSMUST00000172711 A0A286YE02 88 aa4.28□□□□□ -1.72
Trim40-203ENSMUST00000172711 Vpreb3D3Z6J4 130 aa4.28□□□□□ -1.72
Trim40-203ENSMUST00000172711 Tcl1b3P56842 122 aa4.28□□□□□ -1.72
Trim40-203ENSMUST00000172711 Krtap4-6Q3V4B7 195 aa4.28□□□□□ -1.72
Trim40-203ENSMUST00000172711 Igkv8-21A0A140T8P7 120 aa4.27□□□□□ -1.73
Trim40-203ENSMUST00000172711 Igkv3-4A0A140T8Q4 119 aa4.27□□□□□ -1.73
Trim40-203ENSMUST00000172711 A730071L15RikQ8C4X0 137 aa4.26□□□□□ -1.73
Trim40-203ENSMUST00000172711 Ormdl1Q921I0 153 aa4.26□□□□□ -1.73
Trim40-203ENSMUST00000172711 Rpl37Q9D823 97 aa4.26□□□□□ -1.73
Trim40-203ENSMUST00000172711 Gm16381A0A1Y7VKT9 73 aa4.25□□□□□ -1.73
Trim40-203ENSMUST00000172711 Fam229bQ8CF36 80 aa4.25□□□□□ -1.73
Trim40-203ENSMUST00000172711 Ubl5Q9EPV8 73 aa4.25□□□□□ -1.73
Trim40-203ENSMUST00000172711 Gm7544A0A1Y7VJ58 118 aa4.23□□□□□ -1.73
Trim40-203ENSMUST00000172711 Q8BT88 171 aa4.23□□□□□ -1.73
Trim40-203ENSMUST00000172711 Gm16253D3Z167 63 aa4.22□□□□□ -1.73
Trim40-203ENSMUST00000172711 Gm5142Q8C5X9 133 aa4.21□□□□□ -1.73
Trim40-203ENSMUST00000172711 Mdn1A2ANY6 5589 aaKnown RBP4.21□□□□□ -1.74
Trim40-203ENSMUST00000172711 Igkv8-28A0A0G2JE47 121 aa4.21□□□□□ -1.74
Trim40-203ENSMUST00000172711 P06320 134 aa4.21□□□□□ -1.74
Trim40-203ENSMUST00000172711 1700018G05RikA0A1B0GSI2 66 aa4.19□□□□□ -1.74
Trim40-203ENSMUST00000172711 Pde6gP09174 87 aa4.17□□□□□ -1.74
Trim40-203ENSMUST00000172711 Igkv1-35A0A0G2JDE5 120 aa4.16□□□□□ -1.74
Trim40-203ENSMUST00000172711 Gm20538F6Z9R1 75 aa4.15□□□□□ -1.75
Trim40-203ENSMUST00000172711 Atox1O08997 68 aaKnown RBP4.15□□□□□ -1.75
Trim40-203ENSMUST00000172711 Phxr4P15974 95 aa4.15□□□□□ -1.75
Trim40-203ENSMUST00000172711 Coa6Q8BGD8 79 aa4.15□□□□□ -1.75
Trim40-203ENSMUST00000172711 Igkv8-27A0A0G2JF28 120 aa4.14□□□□□ -1.75
Trim40-203ENSMUST00000172711 Igkv8-30A0A140T8M3 121 aa4.14□□□□□ -1.75
Trim40-203ENSMUST00000172711 Krtap9-5A2A5X3 358 aa4.14□□□□□ -1.75
Trim40-203ENSMUST00000172711 Igkv3-3A0A140T8Q0 119 aa4.13□□□□□ -1.75
Trim40-203ENSMUST00000172711 Gm11564A2A4L9 201 aa4.11□□□□□ -1.75
Trim40-203ENSMUST00000172711 Gm11595B1AQA7 289 aa4.11□□□□□ -1.75
Trim40-203ENSMUST00000172711 Krtap4-8B1AQA8 209 aa4.11□□□□□ -1.75
Trim40-203ENSMUST00000172711 Coa5Q99M07 74 aa4.11□□□□□ -1.75
Trim40-203ENSMUST00000172711 Rpl39lQ9CQD0 51 aa4.11□□□□□ -1.75
Trim40-203ENSMUST00000172711 B930094E09RikQ8C4T2 136 aa4.1□□□□□ -1.75
Trim40-203ENSMUST00000172711 Cypt15B1AXS0 87 aa4.09□□□□□ -1.75
Trim40-203ENSMUST00000172711 Igkv2-109A0A075B5K6 120 aa4.07□□□□□ -1.76
Trim40-203ENSMUST00000172711 Cox6a2P43023 97 aa4.04□□□□□ -1.76
Trim40-203ENSMUST00000172711 Igkv8-19A0A0G2JFN8 121 aa4.03□□□□□ -1.76
Trim40-203ENSMUST00000172711 Gm44790A0A0N4SV91 103 aa4.03□□□□□ -1.76
Trim40-203ENSMUST00000172711 Gm12216A0A1W2P827 62 aa4.03□□□□□ -1.76
Trim40-203ENSMUST00000172711 A030005L19RikA0A1Y7VIU2 113 aa4.02□□□□□ -1.77
Trim40-203ENSMUST00000172711 Krtap19-2Q925I0 141 aa4.02□□□□□ -1.77
Trim40-203ENSMUST00000172711 Ndufs5Q99LY9 106 aa4.02□□□□□ -1.77
Trim40-203ENSMUST00000172711 9530003J23RikQ8BM26 151 aa4.01□□□□□ -1.77
Trim40-203ENSMUST00000172711 Fsip2A2ARZ3 6995 aa4.01□□□□□ -1.77
Trim40-203ENSMUST00000172711 Krtap4-9B1AQA9 244 aa3.98□□□□□ -1.77
Trim40-203ENSMUST00000172711 Ndufb1P0DN34 57 aa3.98□□□□□ -1.77
Trim40-203ENSMUST00000172711 Prr15lQ8JZM2 100 aa3.98□□□□□ -1.77
Trim40-203ENSMUST00000172711 Krtap13-1Q8K198 168 aa3.98□□□□□ -1.77
Trim40-203ENSMUST00000172711 Sprr2jO70561 109 aa3.97□□□□□ -1.77
Trim40-203ENSMUST00000172711 Limd2Q8BGB5 128 aa3.97□□□□□ -1.77
Trim40-203ENSMUST00000172711 C130032M10RikQ8C888 123 aa3.96□□□□□ -1.78
Trim40-203ENSMUST00000172711 Gm37013Q8K491 104 aa3.95□□□□□ -1.78
Trim40-203ENSMUST00000172711 SptssbQ925E8 76 aa3.95□□□□□ -1.78
Trim40-203ENSMUST00000172711 Sfta2E9PXB6 77 aa3.95□□□□□ -1.78
Trim40-203ENSMUST00000172711 Reg3aO09037 175 aa3.95□□□□□ -1.78
Trim40-203ENSMUST00000172711 Q8BGJ3 129 aa3.93□□□□□ -1.78
Trim40-203ENSMUST00000172711 Mp68P56379 58 aa3.9□□□□□ -1.78
Trim40-203ENSMUST00000172711 Gm10267M0QWD8 85 aa3.9□□□□□ -1.79
Trim40-203ENSMUST00000172711 Gm17416Q30KP4 66 aa3.9□□□□□ -1.79
Trim40-203ENSMUST00000172711 Krtap1-5A2A590 122 aa3.89□□□□□ -1.79
Trim40-203ENSMUST00000172711 Mt4P47945 62 aa3.89□□□□□ -1.79
Trim40-203ENSMUST00000172711 Pla2g10Q9QXX3 151 aa3.89□□□□□ -1.79
Trim40-203ENSMUST00000172711 Gm6358A0A087WPH4 74 aa3.88□□□□□ -1.79
Trim40-203ENSMUST00000172711 Camk2n1Q6QWF9 78 aa3.88□□□□□ -1.79
Trim40-203ENSMUST00000172711 2300003K06RikA2A4M0 262 aa3.87□□□□□ -1.79
Trim40-203ENSMUST00000172711 Gm10142J3KMP7 120 aa3.85□□□□□ -1.79
Trim40-203ENSMUST00000172711 Gm20661K7N787 53 aa3.85□□□□□ -1.79
Trim40-203ENSMUST00000172711 Mrpl34Q99N91 92 aa3.85□□□□□ -1.79
Trim40-203ENSMUST00000172711 Krtap4-13Q9D7P3 165 aa3.85□□□□□ -1.79
Trim40-203ENSMUST00000172711 Uqcr11Q9CPX8 56 aa3.85□□□□□ -1.79
Trim40-203ENSMUST00000172711 A0A286YE49 62 aa3.84□□□□□ -1.8
Trim40-203ENSMUST00000172711 Defb13Q8R2I4 64 aa3.84□□□□□ -1.8
Trim40-203ENSMUST00000172711 Krtap12-1Q9Z287 130 aa3.84□□□□□ -1.8
Trim40-203ENSMUST00000172711 Krtap6-3A0A087WQL6 57 aa3.81□□□□□ -1.8
Trim40-203ENSMUST00000172711 2310079G19RikQ9D6L6 185 aa3.8□□□□□ -1.8
Trim40-203ENSMUST00000172711 Gm4491E0CX42 125 aa3.79□□□□□ -1.8
Trim40-203ENSMUST00000172711 Lce1kJ3QP15 125 aa3.77□□□□□ -1.81
Trim40-203ENSMUST00000172711 Romo1P60603 79 aa3.77□□□□□ -1.81
Trim40-203ENSMUST00000172711 Krtap9-3Q3V2C1 136 aa3.7□□□□□ -1.82
Trim40-203ENSMUST00000172711 A0A286YCP9 139 aa3.69□□□□□ -1.82
Trim40-203ENSMUST00000172711 Lce1iQ9D6P5 149 aa3.68□□□□□ -1.82
Trim40-203ENSMUST00000172711 Krtap19-9aF8WH65 55 aa3.67□□□□□ -1.82
Trim40-203ENSMUST00000172711 Gm19426M0QWC7 77 aa3.67□□□□□ -1.82
Trim40-203ENSMUST00000172711 Sprr2kO70562 68 aa3.66□□□□□ -1.82
Trim40-203ENSMUST00000172711 Defb38Q7TNV7 63 aa3.65□□□□□ -1.83
Trim40-203ENSMUST00000172711 Lce1a2Q9D1K4 149 aa3.61□□□□□ -1.83
Trim40-203ENSMUST00000172711 Mt2P02798 61 aa3.6□□□□□ -1.83
Trim40-203ENSMUST00000172711 Mt3P28184 68 aa3.6□□□□□ -1.83
Trim40-203ENSMUST00000172711 Gm21798J3QNU5 87 aa3.57□□□□□ -1.84
Trim40-203ENSMUST00000172711 Gm10272F7CZ33 110 aa3.56□□□□□ -1.84
Trim40-203ENSMUST00000172711 Krtap8-1O08633 61 aa3.54□□□□□ -1.84
Trim40-203ENSMUST00000172711 Gm10999F6Q4M4 69 aa3.54□□□□□ -1.84
Trim40-203ENSMUST00000172711 Ndufaf8A2AMZ4 74 aa3.49□□□□□ -1.85
Trim40-203ENSMUST00000172711 Gm9112A2AI92 75 aa3.49□□□□□ -1.85
Trim40-203ENSMUST00000172711 Lce1cQ9D1C5 147 aa3.48□□□□□ -1.85
Retrieved 100 of 22,080 RNA–protein pairs in 100.4 ms