RNA–Protein interactions for RNA: ENSMUST00000161241.7

Usf1-208, Transcript of Upstream stimulatory factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usf1, Length 2,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1-208ENSMUST00000161241 Krtap3-1A2A591 98 aa6.99□□□□□ -1.29
Usf1-208ENSMUST00000161241 CriptO70333 101 aa6.98□□□□□ -1.29
Usf1-208ENSMUST00000161241 Herc2Q4U2R1 4836 aa6.93□□□□□ -1.3
Usf1-208ENSMUST00000161241 Kmt2cQ8BRH4 4903 aa6.92□□□□□ -1.3
Usf1-208ENSMUST00000161241 Gm17416Q30KP4 66 aa6.9□□□□□ -1.3
Usf1-208ENSMUST00000161241 Dnah8Q91XQ0 4731 aa6.89□□□□□ -1.31
Usf1-208ENSMUST00000161241 Birc6O88738 4882 aa6.87□□□□□ -1.31
Usf1-208ENSMUST00000161241 Krtap15-1Q9QZU5 150 aa6.86□□□□□ -1.31
Usf1-208ENSMUST00000161241 Kiaa1109A2AAE1 5005 aa6.83□□□□□ -1.32
Usf1-208ENSMUST00000161241 Krtap19-5O08632 62 aa6.81□□□□□ -1.32
Usf1-208ENSMUST00000161241 Sec61bQ9CQS8 96 aaKnown RBP6.79□□□□□ -1.32
Usf1-208ENSMUST00000161241 Gm5965D3Z724 196 aa6.79□□□□□ -1.32
Usf1-208ENSMUST00000161241 Lrp1Q91ZX7 4545 aaKnown RBP6.78□□□□□ -1.32
Usf1-208ENSMUST00000161241 PcloQ9QYX7 5068 aa6.78□□□□□ -1.32
Usf1-208ENSMUST00000161241 Krtap31-1Q9D644 177 aa6.78□□□□□ -1.32
Usf1-208ENSMUST00000161241 Abca13Q5SSE9 5034 aa6.77□□□□□ -1.33
Usf1-208ENSMUST00000161241 Gm9736A0A1W2P7N1 277 aa6.77□□□□□ -1.33
Usf1-208ENSMUST00000161241 Lce1jD3YUU5 139 aa6.74□□□□□ -1.33
Usf1-208ENSMUST00000161241 HydinQ80W93 5154 aa6.72□□□□□ -1.33
Usf1-208ENSMUST00000161241 Fat3Q8BNA6 4555 aa6.69□□□□□ -1.34
Usf1-208ENSMUST00000161241 Gm19426M0QWC7 77 aa6.68□□□□□ -1.34
Usf1-208ENSMUST00000161241 B930094E09RikQ8C4T2 136 aa6.67□□□□□ -1.34
Usf1-208ENSMUST00000161241 Dnhd1D3Z2X2 4750 aa6.66□□□□□ -1.34
Usf1-208ENSMUST00000161241 Mycbp2Q7TPH6 4711 aa6.62□□□□□ -1.35
Usf1-208ENSMUST00000161241 Gm18596A0A1W2P860 280 aa6.62□□□□□ -1.35
Usf1-208ENSMUST00000161241 BC029722A0A0N4SW31 51 aa6.58□□□□□ -1.36
Usf1-208ENSMUST00000161241 Herc1E9PZP8 4859 aa6.56□□□□□ -1.36
Usf1-208ENSMUST00000161241 Gm17402F6Z0L5 76 aa6.55□□□□□ -1.36
Usf1-208ENSMUST00000161241 Lce1hQ9D6R3 140 aa6.52□□□□□ -1.36
Usf1-208ENSMUST00000161241 Krtap7-1Q9D3I6 87 aa6.5□□□□□ -1.37
Usf1-208ENSMUST00000161241 Krtap13-1Q8K198 168 aa6.48□□□□□ -1.37
Usf1-208ENSMUST00000161241 Gm40193A0A1B0GT39 78 aa6.45□□□□□ -1.38
Usf1-208ENSMUST00000161241 Lrp2A2ARV4 4660 aa6.45□□□□□ -1.38
Usf1-208ENSMUST00000161241 Ndufaf8A2AMZ4 74 aa6.44□□□□□ -1.38
Usf1-208ENSMUST00000161241 Lce1bQ9D149 137 aa6.42□□□□□ -1.38
Usf1-208ENSMUST00000161241 Gm19668J3QMD1 248 aa6.38□□□□□ -1.39
Usf1-208ENSMUST00000161241 Fam229aB2KGE5 128 aa6.36□□□□□ -1.39
Usf1-208ENSMUST00000161241 2310057N15RikQ9D6T8 200 aa6.36□□□□□ -1.39
Usf1-208ENSMUST00000161241 Krtap1-5A2A590 122 aa6.35□□□□□ -1.39
Usf1-208ENSMUST00000161241 Sprr2a3Q4KL71 83 aa6.28□□□□□ -1.4
Usf1-208ENSMUST00000161241 Sprr2a1Q9CQK8 83 aa6.28□□□□□ -1.4
Usf1-208ENSMUST00000161241 Prm1P02319 51 aa6.25□□□□□ -1.41
Usf1-208ENSMUST00000161241 Ush2AQ2QI47 5193 aa6.24□□□□□ -1.41
Usf1-208ENSMUST00000161241 Gm7735D3YX18 52 aa6.23□□□□□ -1.41
Usf1-208ENSMUST00000161241 Prm2P07978 107 aa6.23□□□□□ -1.41
Usf1-208ENSMUST00000161241 Gm38119A0A0A6YX29 146 aa6.22□□□□□ -1.41
Usf1-208ENSMUST00000161241 Krtap17-1A2A5X6 109 aa6.18□□□□□ -1.42
Usf1-208ENSMUST00000161241 Gm9789Q8BIG3 52 aa6.17□□□□□ -1.42
Usf1-208ENSMUST00000161241 Spink7Q6IE32 76 aa6.15□□□□□ -1.43
Usf1-208ENSMUST00000161241 4932415D10RikA0A1W2P6U8 4986 aa6.13□□□□□ -1.43
Usf1-208ENSMUST00000161241 LorP18165 486 aa6.13□□□□□ -1.43
Usf1-208ENSMUST00000161241 Ubr4A2AN08 5180 aa6.12□□□□□ -1.43
Usf1-208ENSMUST00000161241 Hmcn2A2AJ76 5100 aa6.1□□□□□ -1.43
Usf1-208ENSMUST00000161241 Lce1eQ9D139 143 aa6.07□□□□□ -1.44
Usf1-208ENSMUST00000161241 Krtap16-3Q8C1I6 86 aa6.03□□□□□ -1.44
Usf1-208ENSMUST00000161241 Camk2n1Q6QWF9 78 aa6.02□□□□□ -1.45
Usf1-208ENSMUST00000161241 Krtap19-1Q925H2 87 aa5.94□□□□□ -1.46
Usf1-208ENSMUST00000161241 Krtap1-4Q3V2D6 188 aa5.9□□□□□ -1.47
Usf1-208ENSMUST00000161241 Gm10318A0A1W2P728 225 aa5.89□□□□□ -1.47
Usf1-208ENSMUST00000161241 Gm9112A2AI92 75 aa5.89□□□□□ -1.47
Usf1-208ENSMUST00000161241 Crct1Q6PAI5 102 aa5.87□□□□□ -1.47
Usf1-208ENSMUST00000161241 Krtap19-3Q925H6 87 aa5.87□□□□□ -1.47
Usf1-208ENSMUST00000161241 Gm11559Q9D3H7 191 aa5.81□□□□□ -1.48
Usf1-208ENSMUST00000161241 Krtap1-3A2A588 173 aa5.8□□□□□ -1.48
Usf1-208ENSMUST00000161241 Tnp1P10856 55 aa5.78□□□□□ -1.48
Usf1-208ENSMUST00000161241 ZanO88799 5376 aa5.76□□□□□ -1.49
Usf1-208ENSMUST00000161241 Fat4Q2PZL6 4981 aa5.69□□□□□ -1.5
Usf1-208ENSMUST00000161241 Lce1a1Q9CQH5 143 aa5.65□□□□□ -1.51
Usf1-208ENSMUST00000161241 Lce1gQ9D195 139 aa5.65□□□□□ -1.51
Usf1-208ENSMUST00000161241 Gm11562A0PK51 136 aa5.6□□□□□ -1.51
Usf1-208ENSMUST00000161241 Krtap19-9aF8WH65 55 aa5.6□□□□□ -1.51
Usf1-208ENSMUST00000161241 Krtap12-1Q9Z287 130 aa5.57□□□□□ -1.52
Usf1-208ENSMUST00000161241 Rnf213E9Q555 5152 aaKnown RBP5.57□□□□□ -1.52
Usf1-208ENSMUST00000161241 2310046K23RikA0A0A6YVW6 87 aa5.5□□□□□ -1.53
Usf1-208ENSMUST00000161241 Krtap8-1O08633 61 aa5.49□□□□□ -1.53
Usf1-208ENSMUST00000161241 Gm10061D3Z714 54 aa5.48□□□□□ -1.53
Usf1-208ENSMUST00000161241 Gm11569B1AQB1 180 aa5.38□□□□□ -1.55
Usf1-208ENSMUST00000161241 Krtap19-9bQ99NG9 58 aa5.38□□□□□ -1.55
Usf1-208ENSMUST00000161241 SspoQ8CG65 4998 aa5.32□□□□□ -1.56
Usf1-208ENSMUST00000161241 Lce1iQ9D6P5 149 aa5.26□□□□□ -1.57
Usf1-208ENSMUST00000161241 Lce1lQ9D1G7 135 aa5.25□□□□□ -1.57
Usf1-208ENSMUST00000161241 Lce1a2Q9D1K4 149 aa5.22□□□□□ -1.57
Usf1-208ENSMUST00000161241 Krtap19-2Q925I0 141 aa5.16□□□□□ -1.58
Usf1-208ENSMUST00000161241 Krtap9-3Q3V2C1 136 aa5.15□□□□□ -1.58
Usf1-208ENSMUST00000161241 Krtap9-5A2A5X3 358 aa5.11□□□□□ -1.59
Usf1-208ENSMUST00000161241 Gm10100J3QK64 120 aa5.05□□□□□ -1.6
Usf1-208ENSMUST00000161241 Syne2Q6ZWQ0 6874 aaKnown RBP5.05□□□□□ -1.6
Usf1-208ENSMUST00000161241 Gm11596B1AQB0 205 aa5.01□□□□□ -1.61
Usf1-208ENSMUST00000161241 Krtap4-6Q3V4B7 195 aa4.97□□□□□ -1.61
Usf1-208ENSMUST00000161241 Muc5bE9Q5I3 4800 aa4.95□□□□□ -1.62
Usf1-208ENSMUST00000161241 Mdn1A2ANY6 5589 aaKnown RBP4.92□□□□□ -1.62
Usf1-208ENSMUST00000161241 Lce1dQ9D731 133 aa4.91□□□□□ -1.62
Usf1-208ENSMUST00000161241 Sprr2gO70558 76 aa4.9□□□□□ -1.62
Usf1-208ENSMUST00000161241 4933428G20RikQ9D3X4 101 aa4.89□□□□□ -1.63
Usf1-208ENSMUST00000161241 Mt2P02798 61 aa4.87□□□□□ -1.63
Usf1-208ENSMUST00000161241 Gm6358A0A087WPH4 74 aa4.81□□□□□ -1.64
Usf1-208ENSMUST00000161241 Sprr2dO70555 85 aa4.8□□□□□ -1.64
Usf1-208ENSMUST00000161241 Gm11938Q9D3H4 131 aa4.77□□□□□ -1.65
Usf1-208ENSMUST00000161241 Gm11564A2A4L9 201 aa4.76□□□□□ -1.65
Usf1-208ENSMUST00000161241 Gm11595B1AQA7 289 aa4.76□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 73.6 ms