RNA–Protein interactions for RNA: ENSMUST00000152946.7

Ldb1-206, Transcript of LIM domain-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ldb1, Length 2,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-206ENSMUST00000152946 Gm17606F6ZL36 78 aa13.18□□□□□ -0.3
Ldb1-206ENSMUST00000152946 HydinQ80W93 5154 aa13.14□□□□□ -0.31
Ldb1-206ENSMUST00000152946 Gm10382Q3V0T5 144 aa13.09□□□□□ -0.31
Ldb1-206ENSMUST00000152946 Lrp2A2ARV4 4660 aa12.95□□□□□ -0.34
Ldb1-206ENSMUST00000152946 Romo1P60603 79 aa12.92□□□□□ -0.34
Ldb1-206ENSMUST00000152946 2210017I01RikA0A0A6YVV1 95 aa12.83□□□□□ -0.35
Ldb1-206ENSMUST00000152946 Sec61bQ9CQS8 96 aaKnown RBP12.82□□□□□ -0.36
Ldb1-206ENSMUST00000152946 CriptO70333 101 aa12.8□□□□□ -0.36
Ldb1-206ENSMUST00000152946 Krtap3-1A2A591 98 aa12.79□□□□□ -0.36
Ldb1-206ENSMUST00000152946 PcloQ9QYX7 5068 aa12.72□□□□□ -0.37
Ldb1-206ENSMUST00000152946 2310057N15RikQ9D6T8 200 aa12.66□□□□□ -0.38
Ldb1-206ENSMUST00000152946 Mp68P56379 58 aa12.63□□□□□ -0.39
Ldb1-206ENSMUST00000152946 Gm20538F6Z9R1 75 aa12.6□□□□□ -0.39
Ldb1-206ENSMUST00000152946 Krtap13-1Q8K198 168 aa12.55□□□□□ -0.4
Ldb1-206ENSMUST00000152946 Lce1mQ9CR91 182 aa12.48□□□□□ -0.41
Ldb1-206ENSMUST00000152946 Krtap1-5A2A590 122 aa12.36□□□□□ -0.43
Ldb1-206ENSMUST00000152946 Gm19426M0QWC7 77 aa12.36□□□□□ -0.43
Ldb1-206ENSMUST00000152946 B930094E09RikQ8C4T2 136 aa12.35□□□□□ -0.43
Ldb1-206ENSMUST00000152946 Gm21887J3QQ04 176 aa12.34□□□□□ -0.43
Ldb1-206ENSMUST00000152946 Fam229aB2KGE5 128 aa12.31□□□□□ -0.44
Ldb1-206ENSMUST00000152946 BC029722A0A0N4SW31 51 aa12.29□□□□□ -0.44
Ldb1-206ENSMUST00000152946 Herc1E9PZP8 4859 aa12.28□□□□□ -0.44
Ldb1-206ENSMUST00000152946 Krtap16-3Q8C1I6 86 aa12.28□□□□□ -0.44
Ldb1-206ENSMUST00000152946 Krtap19-1Q925H2 87 aa12.17□□□□□ -0.46
Ldb1-206ENSMUST00000152946 Gm17402F6Z0L5 76 aa12.16□□□□□ -0.46
Ldb1-206ENSMUST00000152946 Crct1Q6PAI5 102 aa12.11□□□□□ -0.47
Ldb1-206ENSMUST00000152946 Krtap19-3Q925H6 87 aa12.08□□□□□ -0.47
Ldb1-206ENSMUST00000152946 Gm10318A0A1W2P728 225 aa11.98□□□□□ -0.49
Ldb1-206ENSMUST00000152946 Ush2AQ2QI47 5193 aa11.92□□□□□ -0.5
Ldb1-206ENSMUST00000152946 Krtap7-1Q9D3I6 87 aa11.89□□□□□ -0.51
Ldb1-206ENSMUST00000152946 Hmcn2A2AJ76 5100 aa11.85□□□□□ -0.51
Ldb1-206ENSMUST00000152946 Gm18596A0A1W2P860 280 aa11.83□□□□□ -0.52
Ldb1-206ENSMUST00000152946 Gm40193A0A1B0GT39 78 aa11.82□□□□□ -0.52
Ldb1-206ENSMUST00000152946 Gm19402J3QJV4 266 aa11.82□□□□□ -0.52
Ldb1-206ENSMUST00000152946 Gm9789Q8BIG3 52 aa11.8□□□□□ -0.52
Ldb1-206ENSMUST00000152946 Krtap1-3A2A588 173 aa11.78□□□□□ -0.52
Ldb1-206ENSMUST00000152946 Prm1P02319 51 aa11.72□□□□□ -0.53
Ldb1-206ENSMUST00000152946 Sprr2a3Q4KL71 83 aa11.68□□□□□ -0.54
Ldb1-206ENSMUST00000152946 Sprr2a1Q9CQK8 83 aa11.68□□□□□ -0.54
Ldb1-206ENSMUST00000152946 Ndufaf8A2AMZ4 74 aa11.67□□□□□ -0.54
Ldb1-206ENSMUST00000152946 Spink7Q6IE32 76 aa11.66□□□□□ -0.54
Ldb1-206ENSMUST00000152946 ZanO88799 5376 aa11.64□□□□□ -0.55
Ldb1-206ENSMUST00000152946 Gm7735D3YX18 52 aa11.62□□□□□ -0.55
Ldb1-206ENSMUST00000152946 Krtap1-4Q3V2D6 188 aa11.62□□□□□ -0.55
Ldb1-206ENSMUST00000152946 Ubr4A2AN08 5180 aa11.59□□□□□ -0.55
Ldb1-206ENSMUST00000152946 4932415D10RikA0A1W2P6U8 4986 aa11.58□□□□□ -0.56
Ldb1-206ENSMUST00000152946 LorP18165 486 aa11.45□□□□□ -0.58
Ldb1-206ENSMUST00000152946 Rnf213E9Q555 5152 aaKnown RBP11.33□□□□□ -0.6
Ldb1-206ENSMUST00000152946 Gm19668J3QMD1 248 aa11.24□□□□□ -0.61
Ldb1-206ENSMUST00000152946 Fat4Q2PZL6 4981 aa11.22□□□□□ -0.61
Ldb1-206ENSMUST00000152946 Camk2n1Q6QWF9 78 aa11.2□□□□□ -0.62
Ldb1-206ENSMUST00000152946 Krtap12-1Q9Z287 130 aa11.17□□□□□ -0.62
Ldb1-206ENSMUST00000152946 Lce1jD3YUU5 139 aa11.16□□□□□ -0.62
Ldb1-206ENSMUST00000152946 Krtap19-9aF8WH65 55 aa11.1□□□□□ -0.63
Ldb1-206ENSMUST00000152946 Prm2P07978 107 aa11.09□□□□□ -0.63
Ldb1-206ENSMUST00000152946 SspoQ8CG65 4998 aa10.91□□□□□ -0.66
Ldb1-206ENSMUST00000152946 Krtap19-2Q925I0 141 aa10.73□□□□□ -0.69
Ldb1-206ENSMUST00000152946 Tnp1P10856 55 aa10.67□□□□□ -0.7
Ldb1-206ENSMUST00000152946 Krtap17-1A2A5X6 109 aa10.64□□□□□ -0.71
Ldb1-206ENSMUST00000152946 Krtap9-5A2A5X3 358 aa10.64□□□□□ -0.71
Ldb1-206ENSMUST00000152946 Gm9112A2AI92 75 aa10.6□□□□□ -0.71
Ldb1-206ENSMUST00000152946 Gm10061D3Z714 54 aa10.57□□□□□ -0.72
Ldb1-206ENSMUST00000152946 Lce1iQ9D6P5 149 aa10.49□□□□□ -0.73
Ldb1-206ENSMUST00000152946 Lce1a2Q9D1K4 149 aa10.37□□□□□ -0.75
Ldb1-206ENSMUST00000152946 Krtap8-1O08633 61 aa10.35□□□□□ -0.75
Ldb1-206ENSMUST00000152946 Krtap19-9bQ99NG9 58 aa10.22□□□□□ -0.77
Ldb1-206ENSMUST00000152946 Muc5bE9Q5I3 4800 aa10.16□□□□□ -0.78
Ldb1-206ENSMUST00000152946 2310046K23RikA0A0A6YVW6 87 aa10.13□□□□□ -0.79
Ldb1-206ENSMUST00000152946 Gm6358A0A087WPH4 74 aa10.1□□□□□ -0.79
Ldb1-206ENSMUST00000152946 Mt2P02798 61 aa9.95□□□□□ -0.82
Ldb1-206ENSMUST00000152946 Gm11569B1AQB1 180 aa9.94□□□□□ -0.82
Ldb1-206ENSMUST00000152946 Krtap9-3Q3V2C1 136 aa9.62□□□□□ -0.87
Ldb1-206ENSMUST00000152946 Lce1hQ9D6R3 140 aa9.56□□□□□ -0.88
Ldb1-206ENSMUST00000152946 Krtap22-2J3QNX6 67 aa9.41□□□□□ -0.9
Ldb1-206ENSMUST00000152946 Mdn1A2ANY6 5589 aaKnown RBP9.26□□□□□ -0.93
Ldb1-206ENSMUST00000152946 Gm11555B1AQ89 175 aa9.06□□□□□ -0.96
Ldb1-206ENSMUST00000152946 Lce1dQ9D731 133 aa9.04□□□□□ -0.96
Ldb1-206ENSMUST00000152946 Sprr2gO70558 76 aa9.03□□□□□ -0.96
Ldb1-206ENSMUST00000152946 Krtap4-6Q3V4B7 195 aa9.02□□□□□ -0.96
Ldb1-206ENSMUST00000152946 4933428G20RikQ9D3X4 101 aa9.01□□□□□ -0.97
Ldb1-206ENSMUST00000152946 Lce1gQ9D195 139 aa8.98□□□□□ -0.97
Ldb1-206ENSMUST00000152946 Krtap4-2B1AQ85 167 aa8.89□□□□□ -0.99
Ldb1-206ENSMUST00000152946 Gm10272F7CZ33 110 aa8.86□□□□□ -0.99
Ldb1-206ENSMUST00000152946 Sprr2dO70555 85 aa8.85□□□□□ -0.99
Ldb1-206ENSMUST00000152946 Krtap4-1Q3UUY3 169 aa8.85□□□□□ -0.99
Ldb1-206ENSMUST00000152946 Gm11938Q9D3H4 131 aa8.8□□□□□ -1
Ldb1-206ENSMUST00000152946 Lce1eQ9D139 143 aa8.75□□□□□ -1.01
Ldb1-206ENSMUST00000152946 Gm11596B1AQB0 205 aa8.74□□□□□ -1.01
Ldb1-206ENSMUST00000152946 Syne2Q6ZWQ0 6874 aaKnown RBP8.58□□□□□ -1.04
Ldb1-206ENSMUST00000152946 Gm11564A2A4L9 201 aa8.58□□□□□ -1.04
Ldb1-206ENSMUST00000152946 Gm11563B1AQ90 168 aa8.58□□□□□ -1.04
Ldb1-206ENSMUST00000152946 Gm11595B1AQA7 289 aa8.58□□□□□ -1.04
Ldb1-206ENSMUST00000152946 Krtap4-8B1AQA8 209 aa8.58□□□□□ -1.04
Ldb1-206ENSMUST00000152946 Gm11562A0PK51 136 aa8.57□□□□□ -1.04
Ldb1-206ENSMUST00000152946 Mt4P47945 62 aa8.42□□□□□ -1.06
Ldb1-206ENSMUST00000152946 Lce1bQ9D149 137 aa8.41□□□□□ -1.06
Ldb1-206ENSMUST00000152946 Krtap4-9B1AQA9 244 aa8.37□□□□□ -1.07
Ldb1-206ENSMUST00000152946 Gm38119A0A0A6YX29 146 aa8.28□□□□□ -1.08
Ldb1-206ENSMUST00000152946 Lce1cQ9D1C5 147 aa8.27□□□□□ -1.09
Ldb1-206ENSMUST00000152946 Krtap19-4Q925H7 84 aa8.25□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 82.1 ms