RNA–Protein interactions for RNA: ENSMUST00000113685.9

Tpm1-205, Transcript of Tropomyosin alpha-1 chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Tpm1, Length 1,208 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-205ENSMUST00000113685 Fat4Q2PZL6 4981 aa5.3□□□□□ -1.56
Tpm1-205ENSMUST00000113685 Gm10999F6Q4M4 69 aa5.29□□□□□ -1.56
Tpm1-205ENSMUST00000113685 4930507D05RikQ8C9C9 103 aa5.29□□□□□ -1.56
Tpm1-205ENSMUST00000113685 Lce1jD3YUU5 139 aa5.28□□□□□ -1.56
Tpm1-205ENSMUST00000113685 Krtap16-3Q8C1I6 86 aa5.28□□□□□ -1.56
Tpm1-205ENSMUST00000113685 Atox1O08997 68 aaKnown RBP5.27□□□□□ -1.57
Tpm1-205ENSMUST00000113685 Krtap19-1Q925H2 87 aa5.27□□□□□ -1.57
Tpm1-205ENSMUST00000113685 Krtap19-3Q925H6 87 aa5.27□□□□□ -1.57
Tpm1-205ENSMUST00000113685 Krtap1-4Q3V2D6 188 aa5.21□□□□□ -1.58
Tpm1-205ENSMUST00000113685 4930518I15RikQ3V2W7 57 aa5.21□□□□□ -1.58
Tpm1-205ENSMUST00000113685 Gm10160F6Y577 67 aa5.2□□□□□ -1.58
Tpm1-205ENSMUST00000113685 Serp2Q6TAW2 65 aa5.2□□□□□ -1.58
Tpm1-205ENSMUST00000113685 Gm10643Q3URG9 111 aa5.19□□□□□ -1.58
Tpm1-205ENSMUST00000113685 Coa6Q8BGD8 79 aa5.18□□□□□ -1.58
Tpm1-205ENSMUST00000113685 Gm10061D3Z714 54 aa5.17□□□□□ -1.58
Tpm1-205ENSMUST00000113685 Sox16Q62247 57 aa5.17□□□□□ -1.58
Tpm1-205ENSMUST00000113685 Defb38Q7TNV7 63 aa5.17□□□□□ -1.58
Tpm1-205ENSMUST00000113685 Spint4Q9D263 159 aa5.17□□□□□ -1.58
Tpm1-205ENSMUST00000113685 Rnf213E9Q555 5152 aaKnown RBP5.16□□□□□ -1.58
Tpm1-205ENSMUST00000113685 Gm21798J3QNU5 87 aa5.15□□□□□ -1.59
Tpm1-205ENSMUST00000113685 B230307C23RikQ8BLB2 64 aa5.15□□□□□ -1.59
Tpm1-205ENSMUST00000113685 Anapc13Q8R034 74 aa5.15□□□□□ -1.59
Tpm1-205ENSMUST00000113685 Krtap31-1Q9D644 177 aa5.15□□□□□ -1.59
Tpm1-205ENSMUST00000113685 2310079G19RikQ9D6L6 185 aa5.15□□□□□ -1.59
Tpm1-205ENSMUST00000113685 Krtap13-1Q8K198 168 aa5.14□□□□□ -1.59
Tpm1-205ENSMUST00000113685 Krtap1-5A2A590 122 aa5.11□□□□□ -1.59
Tpm1-205ENSMUST00000113685 Gm11569B1AQB1 180 aa5.1□□□□□ -1.59
Tpm1-205ENSMUST00000113685 SptssbQ925E8 76 aa5.08□□□□□ -1.6
Tpm1-205ENSMUST00000113685 Smlr1J3QMJ4 66 aa5.04□□□□□ -1.6
Tpm1-205ENSMUST00000113685 Gm17606F6ZL36 78 aa5.03□□□□□ -1.6
Tpm1-205ENSMUST00000113685 Cox6b2Q80ZN9 88 aa5□□□□□ -1.61
Tpm1-205ENSMUST00000113685 Coa5Q99M07 74 aa4.98□□□□□ -1.61
Tpm1-205ENSMUST00000113685 Smim20D3Z7Q2 69 aa4.97□□□□□ -1.61
Tpm1-205ENSMUST00000113685 Gm19426M0QWC7 77 aa4.97□□□□□ -1.61
Tpm1-205ENSMUST00000113685 Defb1P56386 69 aa4.96□□□□□ -1.62
Tpm1-205ENSMUST00000113685 Lce1bQ9D149 137 aa4.96□□□□□ -1.62
Tpm1-205ENSMUST00000113685 SspoQ8CG65 4998 aa4.95□□□□□ -1.62
Tpm1-205ENSMUST00000113685 BC029722A0A0N4SW31 51 aa4.92□□□□□ -1.62
Tpm1-205ENSMUST00000113685 Gm20537G3UYK7 97 aa4.91□□□□□ -1.62
Tpm1-205ENSMUST00000113685 Krtap4-9B1AQA9 244 aa4.9□□□□□ -1.63
Tpm1-205ENSMUST00000113685 Lce1kJ3QP15 125 aa4.9□□□□□ -1.63
Tpm1-205ENSMUST00000113685 Pet100P0DJE0 76 aa4.88□□□□□ -1.63
Tpm1-205ENSMUST00000113685 B930094E09RikQ8C4T2 136 aa4.87□□□□□ -1.63
Tpm1-205ENSMUST00000113685 CriptO70333 101 aa4.85□□□□□ -1.63
Tpm1-205ENSMUST00000113685 Lce1cQ9D1C5 147 aa4.84□□□□□ -1.63
Tpm1-205ENSMUST00000113685 Tmem258P61166 79 aa4.83□□□□□ -1.64
Tpm1-205ENSMUST00000113685 Gm20661K7N787 53 aa4.82□□□□□ -1.64
Tpm1-205ENSMUST00000113685 Gm45618A0A1B0GSA0 219 aa4.81□□□□□ -1.64
Tpm1-205ENSMUST00000113685 Limd2Q8BGB5 128 aa4.8□□□□□ -1.64
Tpm1-205ENSMUST00000113685 Gm19935A0A1B0GSF9 52 aa4.79□□□□□ -1.64
Tpm1-205ENSMUST00000113685 Cdc42se1Q8BHL7 80 aa4.79□□□□□ -1.64
Tpm1-205ENSMUST00000113685 Lce1fB9EJP6 147 aa4.78□□□□□ -1.64
Tpm1-205ENSMUST00000113685 Krtap12-1Q9Z287 130 aa4.78□□□□□ -1.64
Tpm1-205ENSMUST00000113685 Pcp4P63054 62 aa4.77□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Gm10382Q3V0T5 144 aa4.77□□□□□ -1.65
Tpm1-205ENSMUST00000113685 H2al1aQ5M8Q2 105 aa4.77□□□□□ -1.65
Tpm1-205ENSMUST00000113685 H2al1eQ810S6 105 aa4.77□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Gm11596B1AQB0 205 aa4.76□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Sec61gP60060 68 aa4.76□□□□□ -1.65
Tpm1-205ENSMUST00000113685 SvipQ3UZP4 77 aa4.76□□□□□ -1.65
Tpm1-205ENSMUST00000113685 SnurfQ9WU12 71 aa4.76□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Syne2Q6ZWQ0 6874 aaKnown RBP4.76□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Uqcr11Q9CPX8 56 aa4.75□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Lce1eQ9D139 143 aa4.75□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Gm11554B1AQB2 190 aa4.74□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Gm2431E9Q8S1 172 aa4.74□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Krtap19-2Q925I0 141 aa4.74□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Pla2g10Q9QXX3 151 aa4.74□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Serp1Q9Z1W5 66 aa4.73□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Krtap9-5A2A5X3 358 aa4.72□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Krtap19-9aF8WH65 55 aa4.72□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Spink7Q6IE32 76 aa4.72□□□□□ -1.65
Tpm1-205ENSMUST00000113685 Gm39115A0A1B0GSH7 232 aa4.71□□□□□ -1.66
Tpm1-205ENSMUST00000113685 Krtap4-6Q3V4B7 195 aa4.71□□□□□ -1.66
Tpm1-205ENSMUST00000113685 Gm11567Q9D141 195 aa4.7□□□□□ -1.66
Tpm1-205ENSMUST00000113685 Phxr4P15974 95 aa4.69□□□□□ -1.66
Tpm1-205ENSMUST00000113685 Gm11559Q9D3H7 191 aa4.69□□□□□ -1.66
Tpm1-205ENSMUST00000113685 Ndufb1P0DN34 57 aa4.67□□□□□ -1.66
Tpm1-205ENSMUST00000113685 SmcpP15265 143 aa4.67□□□□□ -1.66
Tpm1-205ENSMUST00000113685 H2al1bA0A087WP11 105 aa4.66□□□□□ -1.66
Tpm1-205ENSMUST00000113685 Muc5bE9Q5I3 4800 aa4.65□□□□□ -1.67
Tpm1-205ENSMUST00000113685 Gm9955Q8CEJ8 102 aa4.63□□□□□ -1.67
Tpm1-205ENSMUST00000113685 Gm17402F6Z0L5 76 aa4.61□□□□□ -1.67
Tpm1-205ENSMUST00000113685 Prm2P07978 107 aa4.61□□□□□ -1.67
Tpm1-205ENSMUST00000113685 Brk1Q91VR8 75 aa4.59□□□□□ -1.67
Tpm1-205ENSMUST00000113685 Gm10100J3QK64 120 aa4.57□□□□□ -1.68
Tpm1-205ENSMUST00000113685 Gm29735A0A1B0GT06 219 aa4.56□□□□□ -1.68
Tpm1-205ENSMUST00000113685 Rps28P62858 69 aaKnown RBP4.55□□□□□ -1.68
Tpm1-205ENSMUST00000113685 Gm6358A0A087WPH4 74 aa4.52□□□□□ -1.69
Tpm1-205ENSMUST00000113685 Gm11564A2A4L9 201 aa4.52□□□□□ -1.69
Tpm1-205ENSMUST00000113685 Gm11595B1AQA7 289 aa4.52□□□□□ -1.69
Tpm1-205ENSMUST00000113685 Krtap4-8B1AQA8 209 aa4.52□□□□□ -1.69
Tpm1-205ENSMUST00000113685 Sprr2a3Q4KL71 83 aa4.5□□□□□ -1.69
Tpm1-205ENSMUST00000113685 Sprr2a1Q9CQK8 83 aa4.5□□□□□ -1.69
Tpm1-205ENSMUST00000113685 Mdn1A2ANY6 5589 aaKnown RBP4.47□□□□□ -1.69
Tpm1-205ENSMUST00000113685 Lce1iQ9D6P5 149 aa4.4□□□□□ -1.71
Tpm1-205ENSMUST00000113685 Mt2P02798 61 aa4.34□□□□□ -1.71
Tpm1-205ENSMUST00000113685 Mt4P47945 62 aa4.33□□□□□ -1.72
Tpm1-205ENSMUST00000113685 Lce1a2Q9D1K4 149 aa4.32□□□□□ -1.72
Tpm1-205ENSMUST00000113685 H2al1kJ3QP08 105 aa4.3□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms