RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Gm17402F6Z0L5 76 aa5.26□□□□□ -1.57
Trim9-202ENSMUST00000110522 Dnah2P0C6F1 4456 aa5.25□□□□□ -1.57
Trim9-202ENSMUST00000110522 Dnah1E9Q8T7 4250 aa5.23□□□□□ -1.57
Trim9-202ENSMUST00000110522 SacsQ9JLC8 4582 aa5.2□□□□□ -1.58
Trim9-202ENSMUST00000110522 HydinQ80W93 5154 aa5.2□□□□□ -1.58
Trim9-202ENSMUST00000110522 Lrp1Q91ZX7 4545 aaKnown RBP5.19□□□□□ -1.58
Trim9-202ENSMUST00000110522 Hectd4E9Q2E4 4418 aa5.14□□□□□ -1.59
Trim9-202ENSMUST00000110522 Fat3Q8BNA6 4555 aa5.13□□□□□ -1.59
Trim9-202ENSMUST00000110522 Kiaa1109A2AAE1 5005 aa5.13□□□□□ -1.59
Trim9-202ENSMUST00000110522 Gm19668J3QMD1 248 aa5.11□□□□□ -1.59
Trim9-202ENSMUST00000110522 Fras1Q80T14 4010 aa5.11□□□□□ -1.59
Trim9-202ENSMUST00000110522 Dnah7cA0A087WR13 4024 aa5.1□□□□□ -1.59
Trim9-202ENSMUST00000110522 Fat1A0A1L1SQU7 4645 aa5.1□□□□□ -1.59
Trim9-202ENSMUST00000110522 Prm2P07978 107 aa5.1□□□□□ -1.59
Trim9-202ENSMUST00000110522 Herc2Q4U2R1 4836 aa5.07□□□□□ -1.6
Trim9-202ENSMUST00000110522 Gm9112A2AI92 75 aa5.06□□□□□ -1.6
Trim9-202ENSMUST00000110522 Lrp2A2ARV4 4660 aa5.04□□□□□ -1.6
Trim9-202ENSMUST00000110522 Krtap1-5A2A590 122 aa5.04□□□□□ -1.6
Trim9-202ENSMUST00000110522 Dnah7aE9Q0T8 4024 aa5.03□□□□□ -1.6
Trim9-202ENSMUST00000110522 LorP18165 486 aa5□□□□□ -1.61
Trim9-202ENSMUST00000110522 Vps13bQ80TY5 3993 aa5□□□□□ -1.61
Trim9-202ENSMUST00000110522 Gm18596A0A1W2P860 280 aa4.99□□□□□ -1.61
Trim9-202ENSMUST00000110522 Pkd1O08852 4293 aa4.97□□□□□ -1.61
Trim9-202ENSMUST00000110522 Gm19402J3QJV4 266 aa4.91□□□□□ -1.62
Trim9-202ENSMUST00000110522 Sprr2a3Q4KL71 83 aa4.91□□□□□ -1.62
Trim9-202ENSMUST00000110522 Sprr2a1Q9CQK8 83 aa4.91□□□□□ -1.62
Trim9-202ENSMUST00000110522 Krtap1-4Q3V2D6 188 aa4.89□□□□□ -1.63
Trim9-202ENSMUST00000110522 Ryr2E9Q401 4966 aaKnown RBP4.88□□□□□ -1.63
Trim9-202ENSMUST00000110522 Dnah8Q91XQ0 4731 aa4.86□□□□□ -1.63
Trim9-202ENSMUST00000110522 Fat2Q5F226 4351 aa4.82□□□□□ -1.64
Trim9-202ENSMUST00000110522 Krtap19-9aF8WH65 55 aa4.81□□□□□ -1.64
Trim9-202ENSMUST00000110522 Krtap7-1Q9D3I6 87 aa4.8□□□□□ -1.64
Trim9-202ENSMUST00000110522 Lce1mQ9CR91 182 aa4.79□□□□□ -1.64
Trim9-202ENSMUST00000110522 Krtap16-3Q8C1I6 86 aa4.79□□□□□ -1.64
Trim9-202ENSMUST00000110522 Krtap12-1Q9Z287 130 aa4.76□□□□□ -1.65
Trim9-202ENSMUST00000110522 Abca13Q5SSE9 5034 aa4.76□□□□□ -1.65
Trim9-202ENSMUST00000110522 Krtap19-3Q925H6 87 aa4.75□□□□□ -1.65
Trim9-202ENSMUST00000110522 Dnhd1D3Z2X2 4750 aa4.7□□□□□ -1.66
Trim9-202ENSMUST00000110522 Kmt2cQ8BRH4 4903 aa4.69□□□□□ -1.66
Trim9-202ENSMUST00000110522 Krtap19-1Q925H2 87 aa4.69□□□□□ -1.66
Trim9-202ENSMUST00000110522 PcloQ9QYX7 5068 aa4.62□□□□□ -1.67
Trim9-202ENSMUST00000110522 Birc6O88738 4882 aa4.59□□□□□ -1.68
Trim9-202ENSMUST00000110522 Pkhd1l1Q80ZA4 4249 aa4.57□□□□□ -1.68
Trim9-202ENSMUST00000110522 Krtap19-9bQ99NG9 58 aa4.56□□□□□ -1.68
Trim9-202ENSMUST00000110522 Gm6358A0A087WPH4 74 aa4.56□□□□□ -1.68
Trim9-202ENSMUST00000110522 Krtap8-1O08633 61 aa4.52□□□□□ -1.69
Trim9-202ENSMUST00000110522 Krtap9-5A2A5X3 358 aa4.52□□□□□ -1.69
Trim9-202ENSMUST00000110522 Pkhd1E9PZ36 4059 aa4.5□□□□□ -1.69
Trim9-202ENSMUST00000110522 Krtap1-3A2A588 173 aa4.49□□□□□ -1.69
Trim9-202ENSMUST00000110522 4933428G20RikQ9D3X4 101 aa4.49□□□□□ -1.69
Trim9-202ENSMUST00000110522 Prm1P02319 51 aa4.48□□□□□ -1.69
Trim9-202ENSMUST00000110522 Herc1E9PZP8 4859 aa4.44□□□□□ -1.7
Trim9-202ENSMUST00000110522 Ubr4A2AN08 5180 aa4.43□□□□□ -1.7
Trim9-202ENSMUST00000110522 Mdn1A2ANY6 5589 aaKnown RBP4.43□□□□□ -1.7
Trim9-202ENSMUST00000110522 Lce1jD3YUU5 139 aa4.43□□□□□ -1.7
Trim9-202ENSMUST00000110522 Gm7735D3YX18 52 aa4.43□□□□□ -1.7
Trim9-202ENSMUST00000110522 Gm9789Q8BIG3 52 aa4.36□□□□□ -1.71
Trim9-202ENSMUST00000110522 Krtap19-2Q925I0 141 aa4.34□□□□□ -1.72
Trim9-202ENSMUST00000110522 4932415D10RikA0A1W2P6U8 4986 aa4.33□□□□□ -1.72
Trim9-202ENSMUST00000110522 Mt2P02798 61 aa4.26□□□□□ -1.73
Trim9-202ENSMUST00000110522 Sprr2kO70562 68 aa4.25□□□□□ -1.73
Trim9-202ENSMUST00000110522 Ush2AQ2QI47 5193 aa4.23□□□□□ -1.73
Trim9-202ENSMUST00000110522 ZanO88799 5376 aa4.22□□□□□ -1.73
Trim9-202ENSMUST00000110522 Fat4Q2PZL6 4981 aa4.22□□□□□ -1.73
Trim9-202ENSMUST00000110522 Rnf213E9Q555 5152 aaKnown RBP4.2□□□□□ -1.74
Trim9-202ENSMUST00000110522 Gm10061D3Z714 54 aa4.17□□□□□ -1.74
Trim9-202ENSMUST00000110522 Krtap22-2J3QNX6 67 aa4.14□□□□□ -1.75
Trim9-202ENSMUST00000110522 Gm10272F7CZ33 110 aa4.13□□□□□ -1.75
Trim9-202ENSMUST00000110522 Hmcn2A2AJ76 5100 aa4.09□□□□□ -1.75
Trim9-202ENSMUST00000110522 Krtap17-1A2A5X6 109 aa4.08□□□□□ -1.76
Trim9-202ENSMUST00000110522 Lce1iQ9D6P5 149 aa4.07□□□□□ -1.76
Trim9-202ENSMUST00000110522 2310046K23RikA0A0A6YVW6 87 aa4.07□□□□□ -1.76
Trim9-202ENSMUST00000110522 Gm11569B1AQB1 180 aa4.03□□□□□ -1.76
Trim9-202ENSMUST00000110522 Lce1a2Q9D1K4 149 aa4.02□□□□□ -1.77
Trim9-202ENSMUST00000110522 Lce3bQ9CQM7 98 aa4□□□□□ -1.77
Trim9-202ENSMUST00000110522 Syne1Q6ZWR6 8799 aa3.98□□□□□ -1.77
Trim9-202ENSMUST00000110522 Gm38119A0A0A6YX29 146 aa3.97□□□□□ -1.77
Trim9-202ENSMUST00000110522 Gm10100J3QK64 120 aa3.94□□□□□ -1.78
Trim9-202ENSMUST00000110522 Sprr2gO70558 76 aa3.94□□□□□ -1.78
Trim9-202ENSMUST00000110522 Lce3cQ91V05 98 aa3.93□□□□□ -1.78
Trim9-202ENSMUST00000110522 Krtap9-3Q3V2C1 136 aa3.85□□□□□ -1.79
Trim9-202ENSMUST00000110522 Lce3eF8VQJ0 98 aa3.82□□□□□ -1.8
Trim9-202ENSMUST00000110522 Lce3fQ6PAI4 98 aa3.82□□□□□ -1.8
Trim9-202ENSMUST00000110522 Krtap4-6Q3V4B7 195 aa3.81□□□□□ -1.8
Trim9-202ENSMUST00000110522 Lce1hQ9D6R3 140 aa3.81□□□□□ -1.8
Trim9-202ENSMUST00000110522 Gm10142J3KMP7 120 aa3.79□□□□□ -1.8
Trim9-202ENSMUST00000110522 Fsip2A2ARZ3 6995 aa3.78□□□□□ -1.8
Trim9-202ENSMUST00000110522 Krtap4-2B1AQ85 167 aa3.75□□□□□ -1.81
Trim9-202ENSMUST00000110522 Mt4P47945 62 aa3.74□□□□□ -1.81
Trim9-202ENSMUST00000110522 Lce3dE9Q8V1 98 aa3.73□□□□□ -1.81
Trim9-202ENSMUST00000110522 Muc16A0A140LJ72 8478 aa3.72□□□□□ -1.81
Trim9-202ENSMUST00000110522 Muc5bE9Q5I3 4800 aa3.7□□□□□ -1.82
Trim9-202ENSMUST00000110522 Lce1bQ9D149 137 aa3.68□□□□□ -1.82
Trim9-202ENSMUST00000110522 Lce3aQ497I5 98 aa3.68□□□□□ -1.82
Trim9-202ENSMUST00000110522 Sprr2iO70560 76 aa3.68□□□□□ -1.82
Trim9-202ENSMUST00000110522 Lce1gQ9D195 139 aa3.67□□□□□ -1.82
Trim9-202ENSMUST00000110522 Lce1fB9EJP6 147 aa3.67□□□□□ -1.82
Trim9-202ENSMUST00000110522 Lce1cQ9D1C5 147 aa3.67□□□□□ -1.82
Trim9-202ENSMUST00000110522 Lce1lQ9D1G7 135 aa3.67□□□□□ -1.82
Trim9-202ENSMUST00000110522 Lce1dQ9D731 133 aa3.67□□□□□ -1.82
Retrieved 100 of 22,080 RNA–protein pairs in 55.2 ms