RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Gm17416Q30KP4 66 aa5.74□□□□□ -1.49
Vps54-202ENSMUST00000109578 HydinQ80W93 5154 aa5.73□□□□□ -1.49
Vps54-202ENSMUST00000109578 Kiaa1109A2AAE1 5005 aa5.71□□□□□ -1.5
Vps54-202ENSMUST00000109578 Gm21887J3QQ04 176 aa5.67□□□□□ -1.5
Vps54-202ENSMUST00000109578 2210017I01RikA0A0A6YVV1 95 aa5.66□□□□□ -1.5
Vps54-202ENSMUST00000109578 Herc2Q4U2R1 4836 aa5.65□□□□□ -1.5
Vps54-202ENSMUST00000109578 2310057N15RikQ9D6T8 200 aa5.63□□□□□ -1.51
Vps54-202ENSMUST00000109578 Lrp2A2ARV4 4660 aa5.62□□□□□ -1.51
Vps54-202ENSMUST00000109578 Mp68P56379 58 aa5.57□□□□□ -1.52
Vps54-202ENSMUST00000109578 Krtap13-1Q8K198 168 aa5.57□□□□□ -1.52
Vps54-202ENSMUST00000109578 Gm19426M0QWC7 77 aa5.55□□□□□ -1.52
Vps54-202ENSMUST00000109578 B930094E09RikQ8C4T2 136 aa5.55□□□□□ -1.52
Vps54-202ENSMUST00000109578 Dnhd1D3Z2X2 4750 aa5.55□□□□□ -1.52
Vps54-202ENSMUST00000109578 BC029722A0A0N4SW31 51 aa5.52□□□□□ -1.53
Vps54-202ENSMUST00000109578 PcloQ9QYX7 5068 aa5.51□□□□□ -1.53
Vps54-202ENSMUST00000109578 Gm20538F6Z9R1 75 aa5.5□□□□□ -1.53
Vps54-202ENSMUST00000109578 Birc6O88738 4882 aa5.46□□□□□ -1.54
Vps54-202ENSMUST00000109578 Gm10318A0A1W2P728 225 aa5.45□□□□□ -1.54
Vps54-202ENSMUST00000109578 Gm19402J3QJV4 266 aa5.44□□□□□ -1.54
Vps54-202ENSMUST00000109578 Crct1Q6PAI5 102 aa5.4□□□□□ -1.55
Vps54-202ENSMUST00000109578 Krtap1-5A2A590 122 aa5.36□□□□□ -1.55
Vps54-202ENSMUST00000109578 Sec61bQ9CQS8 96 aaKnown RBP5.34□□□□□ -1.55
Vps54-202ENSMUST00000109578 Krtap7-1Q9D3I6 87 aa5.34□□□□□ -1.55
Vps54-202ENSMUST00000109578 Spink7Q6IE32 76 aa5.3□□□□□ -1.56
Vps54-202ENSMUST00000109578 Gm17402F6Z0L5 76 aa5.28□□□□□ -1.56
Vps54-202ENSMUST00000109578 Krtap16-3Q8C1I6 86 aa5.28□□□□□ -1.56
Vps54-202ENSMUST00000109578 Gm19668J3QMD1 248 aa5.24□□□□□ -1.57
Vps54-202ENSMUST00000109578 Ndufaf8A2AMZ4 74 aa5.24□□□□□ -1.57
Vps54-202ENSMUST00000109578 Sprr2a3Q4KL71 83 aa5.23□□□□□ -1.57
Vps54-202ENSMUST00000109578 Sprr2a1Q9CQK8 83 aa5.23□□□□□ -1.57
Vps54-202ENSMUST00000109578 Herc1E9PZP8 4859 aa5.23□□□□□ -1.57
Vps54-202ENSMUST00000109578 Fam229aB2KGE5 128 aa5.22□□□□□ -1.57
Vps54-202ENSMUST00000109578 Ubr4A2AN08 5180 aa5.19□□□□□ -1.58
Vps54-202ENSMUST00000109578 Krtap19-1Q925H2 87 aa5.18□□□□□ -1.58
Vps54-202ENSMUST00000109578 ZanO88799 5376 aa5.15□□□□□ -1.58
Vps54-202ENSMUST00000109578 Krtap19-3Q925H6 87 aa5.15□□□□□ -1.58
Vps54-202ENSMUST00000109578 Fat4Q2PZL6 4981 aa5.12□□□□□ -1.59
Vps54-202ENSMUST00000109578 4932415D10RikA0A1W2P6U8 4986 aa5.08□□□□□ -1.6
Vps54-202ENSMUST00000109578 Gm40193A0A1B0GT39 78 aa5.08□□□□□ -1.6
Vps54-202ENSMUST00000109578 Krtap1-4Q3V2D6 188 aa5.05□□□□□ -1.6
Vps54-202ENSMUST00000109578 Camk2n1Q6QWF9 78 aa5.05□□□□□ -1.6
Vps54-202ENSMUST00000109578 Prm2P07978 107 aa5□□□□□ -1.61
Vps54-202ENSMUST00000109578 Ush2AQ2QI47 5193 aa4.99□□□□□ -1.61
Vps54-202ENSMUST00000109578 Lce1mQ9CR91 182 aa4.97□□□□□ -1.61
Vps54-202ENSMUST00000109578 Hmcn2A2AJ76 5100 aa4.96□□□□□ -1.61
Vps54-202ENSMUST00000109578 Lce1jD3YUU5 139 aa4.95□□□□□ -1.62
Vps54-202ENSMUST00000109578 Krtap1-3A2A588 173 aa4.88□□□□□ -1.63
Vps54-202ENSMUST00000109578 Rnf213E9Q555 5152 aaKnown RBP4.88□□□□□ -1.63
Vps54-202ENSMUST00000109578 LorP18165 486 aa4.85□□□□□ -1.63
Vps54-202ENSMUST00000109578 Krtap12-1Q9Z287 130 aa4.82□□□□□ -1.64
Vps54-202ENSMUST00000109578 Krtap17-1A2A5X6 109 aa4.8□□□□□ -1.64
Vps54-202ENSMUST00000109578 Krtap19-9aF8WH65 55 aa4.78□□□□□ -1.64
Vps54-202ENSMUST00000109578 Gm18596A0A1W2P860 280 aa4.74□□□□□ -1.65
Vps54-202ENSMUST00000109578 Tnp1P10856 55 aa4.72□□□□□ -1.65
Vps54-202ENSMUST00000109578 Gm9112A2AI92 75 aa4.71□□□□□ -1.66
Vps54-202ENSMUST00000109578 A0A1Y7VLE6 161 aa4.65□□□□□ -1.66
Vps54-202ENSMUST00000109578 Gm9789Q8BIG3 52 aa4.64□□□□□ -1.67
Vps54-202ENSMUST00000109578 Lce1iQ9D6P5 149 aa4.62□□□□□ -1.67
Vps54-202ENSMUST00000109578 Lce1a2Q9D1K4 149 aa4.6□□□□□ -1.67
Vps54-202ENSMUST00000109578 Gm7735D3YX18 52 aa4.59□□□□□ -1.68
Vps54-202ENSMUST00000109578 Krtap8-1O08633 61 aa4.58□□□□□ -1.68
Vps54-202ENSMUST00000109578 Prm1P02319 51 aa4.57□□□□□ -1.68
Vps54-202ENSMUST00000109578 Krtap19-2Q925I0 141 aa4.54□□□□□ -1.68
Vps54-202ENSMUST00000109578 Krtap9-5A2A5X3 358 aa4.53□□□□□ -1.68
Vps54-202ENSMUST00000109578 Krtap9-3Q3V2C1 136 aa4.53□□□□□ -1.68
Vps54-202ENSMUST00000109578 Krtap19-9bQ99NG9 58 aa4.52□□□□□ -1.69
Vps54-202ENSMUST00000109578 SspoQ8CG65 4998 aa4.48□□□□□ -1.69
Vps54-202ENSMUST00000109578 2310046K23RikA0A0A6YVW6 87 aa4.45□□□□□ -1.7
Vps54-202ENSMUST00000109578 Lce1hQ9D6R3 140 aa4.44□□□□□ -1.7
Vps54-202ENSMUST00000109578 A0A1Y7VJH8 109 aa4.3□□□□□ -1.72
Vps54-202ENSMUST00000109578 Mt2P02798 61 aa4.27□□□□□ -1.73
Vps54-202ENSMUST00000109578 Gm6358A0A087WPH4 74 aa4.25□□□□□ -1.73
Vps54-202ENSMUST00000109578 Muc5bE9Q5I3 4800 aa4.23□□□□□ -1.73
Vps54-202ENSMUST00000109578 Krtap28-10A0A1Y7VP58 119 aa4.23□□□□□ -1.73
Vps54-202ENSMUST00000109578 Gm10061D3Z714 54 aa4.22□□□□□ -1.73
Vps54-202ENSMUST00000109578 Lce1dQ9D731 133 aa4.21□□□□□ -1.73
Vps54-202ENSMUST00000109578 A030003K21RikA0A1Y7VIM3 128 aa4.13□□□□□ -1.75
Vps54-202ENSMUST00000109578 Mdn1A2ANY6 5589 aaKnown RBP4.1□□□□□ -1.75
Vps54-202ENSMUST00000109578 Gm7544A0A1Y7VJ58 118 aa4.07□□□□□ -1.76
Vps54-202ENSMUST00000109578 Lce1eQ9D139 143 aa4.06□□□□□ -1.76
Vps54-202ENSMUST00000109578 A030005L19RikA0A1Y7VIU2 113 aa4.04□□□□□ -1.76
Vps54-202ENSMUST00000109578 Gm10272F7CZ33 110 aa4.02□□□□□ -1.77
Vps54-202ENSMUST00000109578 Sprr2gO70558 76 aa4□□□□□ -1.77
Vps54-202ENSMUST00000109578 Krtap22-2J3QNX6 67 aa3.98□□□□□ -1.77
Vps54-202ENSMUST00000109578 Gm11938Q9D3H4 131 aa3.97□□□□□ -1.77
Vps54-202ENSMUST00000109578 Gm11569B1AQB1 180 aa3.95□□□□□ -1.78
Vps54-202ENSMUST00000109578 Krtap28-13A0A087WQP5 138 aa3.95□□□□□ -1.78
Vps54-202ENSMUST00000109578 A030005K14RikA0A1Y7VNY1 122 aa3.92□□□□□ -1.78
Vps54-202ENSMUST00000109578 4933428G20RikQ9D3X4 101 aa3.9□□□□□ -1.78
Vps54-202ENSMUST00000109578 Sprr2dO70555 85 aa3.9□□□□□ -1.79
Vps54-202ENSMUST00000109578 Lce1cQ9D1C5 147 aa3.89□□□□□ -1.79
Vps54-202ENSMUST00000109578 Gm6217A0A1Y7VJK9 128 aa3.83□□□□□ -1.8
Vps54-202ENSMUST00000109578 Syne1Q6ZWR6 8799 aa3.77□□□□□ -1.81
Vps54-202ENSMUST00000109578 Gm11562A0PK51 136 aa3.76□□□□□ -1.81
Vps54-202ENSMUST00000109578 Lce1fB9EJP6 147 aa3.74□□□□□ -1.81
Vps54-202ENSMUST00000109578 Lce1a1Q9CQH5 143 aa3.74□□□□□ -1.81
Vps54-202ENSMUST00000109578 Gm10100J3QK64 120 aa3.72□□□□□ -1.81
Vps54-202ENSMUST00000109578 Lce3bQ9CQM7 98 aa3.7□□□□□ -1.82
Vps54-202ENSMUST00000109578 Gm11555B1AQ89 175 aa3.7□□□□□ -1.82
Vps54-202ENSMUST00000109578 Krtap4-2B1AQ85 167 aa3.64□□□□□ -1.83
Retrieved 100 of 22,080 RNA–protein pairs in 117.2 ms