RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 LystP97412 3788 aa4.07□□□□□ -1.76
Vcan-202ENSMUST00000109544 Dnah10D3YYQ8 4591 aa4.06□□□□□ -1.76
Vcan-202ENSMUST00000109544 2310046K23RikA0A0A6YVW6 87 aa4.05□□□□□ -1.76
Vcan-202ENSMUST00000109544 PlecQ9QXS1 4691 aaKnown RBP4.05□□□□□ -1.76
Vcan-202ENSMUST00000109544 Sprr2gO70558 76 aa4.04□□□□□ -1.76
Vcan-202ENSMUST00000109544 Gm10100J3QK64 120 aa4.03□□□□□ -1.76
Vcan-202ENSMUST00000109544 PrkdcP97313 4128 aa4.02□□□□□ -1.77
Vcan-202ENSMUST00000109544 Gm7735D3YX18 52 aa4□□□□□ -1.77
Vcan-202ENSMUST00000109544 Lce3bQ9CQM7 98 aa4□□□□□ -1.77
Vcan-202ENSMUST00000109544 Dync2h1Q45VK7 4306 aa3.97□□□□□ -1.77
Vcan-202ENSMUST00000109544 Lce3cQ91V05 98 aa3.97□□□□□ -1.77
Vcan-202ENSMUST00000109544 Gm10142J3KMP7 120 aa3.95□□□□□ -1.78
Vcan-202ENSMUST00000109544 Gm10272F7CZ33 110 aa3.95□□□□□ -1.78
Vcan-202ENSMUST00000109544 Dync1h1Q9JHU4 4644 aaKnown RBP3.93□□□□□ -1.78
Vcan-202ENSMUST00000109544 BsnO88737 3942 aa3.91□□□□□ -1.78
Vcan-202ENSMUST00000109544 Dnah2P0C6F1 4456 aa3.9□□□□□ -1.79
Vcan-202ENSMUST00000109544 Xirp2Q4U4S6 3784 aa3.89□□□□□ -1.79
Vcan-202ENSMUST00000109544 Pkd1O08852 4293 aa3.89□□□□□ -1.79
Vcan-202ENSMUST00000109544 Dnah11E9Q7N9 4488 aa3.89□□□□□ -1.79
Vcan-202ENSMUST00000109544 Dnah9B1AR51 4484 aa3.88□□□□□ -1.79
Vcan-202ENSMUST00000109544 Lce3eF8VQJ0 98 aa3.86□□□□□ -1.79
Vcan-202ENSMUST00000109544 Lce3fQ6PAI4 98 aa3.86□□□□□ -1.79
Vcan-202ENSMUST00000109544 Dnah8Q91XQ0 4731 aa3.86□□□□□ -1.79
Vcan-202ENSMUST00000109544 Gm9789Q8BIG3 52 aa3.86□□□□□ -1.79
Vcan-202ENSMUST00000109544 Lce3dE9Q8V1 98 aa3.85□□□□□ -1.79
Vcan-202ENSMUST00000109544 Dnah3Q8BW94 4083 aa3.85□□□□□ -1.79
Vcan-202ENSMUST00000109544 ApobE9Q414 4505 aa3.83□□□□□ -1.8
Vcan-202ENSMUST00000109544 Dnah1E9Q8T7 4250 aa3.82□□□□□ -1.8
Vcan-202ENSMUST00000109544 Hspg2Q05793 3707 aaKnown RBP3.82□□□□□ -1.8
Vcan-202ENSMUST00000109544 Krtap9-5A2A5X3 358 aa3.81□□□□□ -1.8
Vcan-202ENSMUST00000109544 CubnQ9JLB4 3623 aa3.81□□□□□ -1.8
Vcan-202ENSMUST00000109544 A0A1Y7VLE6 161 aa3.8□□□□□ -1.8
Vcan-202ENSMUST00000109544 Ryr2E9Q401 4966 aaKnown RBP3.8□□□□□ -1.8
Vcan-202ENSMUST00000109544 Lce3aQ497I5 98 aa3.78□□□□□ -1.8
Vcan-202ENSMUST00000109544 Herc2Q4U2R1 4836 aa3.77□□□□□ -1.81
Vcan-202ENSMUST00000109544 Dnah7bL7N1Y0 4068 aa3.76□□□□□ -1.81
Vcan-202ENSMUST00000109544 Krtap22-2J3QNX6 67 aa3.76□□□□□ -1.81
Vcan-202ENSMUST00000109544 Krtap19-3Q925H6 87 aa3.76□□□□□ -1.81
Vcan-202ENSMUST00000109544 SacsQ9JLC8 4582 aa3.76□□□□□ -1.81
Vcan-202ENSMUST00000109544 Krtap16-3Q8C1I6 86 aa3.75□□□□□ -1.81
Vcan-202ENSMUST00000109544 Ryr3A2AGL3 4863 aa3.75□□□□□ -1.81
Vcan-202ENSMUST00000109544 Lrp1bQ9JI18 4599 aa3.73□□□□□ -1.81
Vcan-202ENSMUST00000109544 Dnhd1D3Z2X2 4750 aa3.72□□□□□ -1.81
Vcan-202ENSMUST00000109544 Krtap4-2B1AQ85 167 aa3.71□□□□□ -1.81
Vcan-202ENSMUST00000109544 Fras1Q80T14 4010 aa3.71□□□□□ -1.82
Vcan-202ENSMUST00000109544 Kmt2aP55200 3966 aa3.7□□□□□ -1.82
Vcan-202ENSMUST00000109544 Krtap17-1A2A5X6 109 aa3.7□□□□□ -1.82
Vcan-202ENSMUST00000109544 Csmd3Q80T79 3707 aa3.69□□□□□ -1.82
Vcan-202ENSMUST00000109544 Hectd4E9Q2E4 4418 aa3.69□□□□□ -1.82
Vcan-202ENSMUST00000109544 Mycbp2Q7TPH6 4711 aa3.69□□□□□ -1.82
Vcan-202ENSMUST00000109544 Mt2P02798 61 aa3.68□□□□□ -1.82
Vcan-202ENSMUST00000109544 Sprr2iO70560 76 aa3.68□□□□□ -1.82
Vcan-202ENSMUST00000109544 Gm10024A0A0A0MQA4 119 aa3.68□□□□□ -1.82
Vcan-202ENSMUST00000109544 Krtap19-1Q925H2 87 aa3.68□□□□□ -1.82
Vcan-202ENSMUST00000109544 Fat1A0A1L1SQU7 4645 aa3.68□□□□□ -1.82
Vcan-202ENSMUST00000109544 Lrp1Q91ZX7 4545 aaKnown RBP3.67□□□□□ -1.82
Vcan-202ENSMUST00000109544 HydinQ80W93 5154 aa3.67□□□□□ -1.82
Vcan-202ENSMUST00000109544 Dnah6E9Q0B6 4144 aa3.67□□□□□ -1.82
Vcan-202ENSMUST00000109544 Kiaa1109A2AAE1 5005 aa3.65□□□□□ -1.82
Vcan-202ENSMUST00000109544 Krtap19-4Q925H7 84 aa3.63□□□□□ -1.83
Vcan-202ENSMUST00000109544 Gm11569B1AQB1 180 aa3.63□□□□□ -1.83
Vcan-202ENSMUST00000109544 Fat3Q8BNA6 4555 aa3.62□□□□□ -1.83
Vcan-202ENSMUST00000109544 Birc6O88738 4882 aa3.6□□□□□ -1.83
Vcan-202ENSMUST00000109544 Gm10061D3Z714 54 aa3.6□□□□□ -1.83
Vcan-202ENSMUST00000109544 Lce1gQ9D195 139 aa3.59□□□□□ -1.83
Vcan-202ENSMUST00000109544 Krtap9-3Q3V2C1 136 aa3.59□□□□□ -1.84
Vcan-202ENSMUST00000109544 Gm11562A0PK51 136 aa3.57□□□□□ -1.84
Vcan-202ENSMUST00000109544 Krtap1-3A2A588 173 aa3.57□□□□□ -1.84
Vcan-202ENSMUST00000109544 4932415D10RikA0A1W2P6U8 4986 aa3.55□□□□□ -1.84
Vcan-202ENSMUST00000109544 Lce1jD3YUU5 139 aa3.54□□□□□ -1.84
Vcan-202ENSMUST00000109544 Sprr2eO70556 76 aa3.54□□□□□ -1.84
Vcan-202ENSMUST00000109544 Lce1iQ9D6P5 149 aa3.54□□□□□ -1.84
Vcan-202ENSMUST00000109544 Lce1hQ9D6R3 140 aa3.54□□□□□ -1.84
Vcan-202ENSMUST00000109544 Krtap19-2Q925I0 141 aa3.53□□□□□ -1.84
Vcan-202ENSMUST00000109544 Herc1E9PZP8 4859 aa3.53□□□□□ -1.84
Vcan-202ENSMUST00000109544 Dnah7aE9Q0T8 4024 aa3.52□□□□□ -1.85
Vcan-202ENSMUST00000109544 Lce1fB9EJP6 147 aa3.52□□□□□ -1.85
Vcan-202ENSMUST00000109544 Lce1cQ9D1C5 147 aa3.52□□□□□ -1.85
Vcan-202ENSMUST00000109544 Lce1lQ9D1G7 135 aa3.52□□□□□ -1.85
Vcan-202ENSMUST00000109544 Lce1dQ9D731 133 aa3.52□□□□□ -1.85
Vcan-202ENSMUST00000109544 Gm38119A0A0A6YX29 146 aa3.48□□□□□ -1.85
Vcan-202ENSMUST00000109544 Lce1eQ9D139 143 aa3.48□□□□□ -1.85
Vcan-202ENSMUST00000109544 Lrp2A2ARV4 4660 aa3.48□□□□□ -1.85
Vcan-202ENSMUST00000109544 Dnah7cA0A087WR13 4024 aa3.47□□□□□ -1.85
Vcan-202ENSMUST00000109544 Sprr2fO70557 76 aa3.47□□□□□ -1.85
Vcan-202ENSMUST00000109544 Fat2Q5F226 4351 aa3.46□□□□□ -1.86
Vcan-202ENSMUST00000109544 Lce1bQ9D149 137 aa3.45□□□□□ -1.86
Vcan-202ENSMUST00000109544 Krtap4-1Q3UUY3 169 aa3.45□□□□□ -1.86
Vcan-202ENSMUST00000109544 A030003K21RikA0A1Y7VIM3 128 aa3.43□□□□□ -1.86
Vcan-202ENSMUST00000109544 Gm11596B1AQB0 205 aa3.41□□□□□ -1.86
Vcan-202ENSMUST00000109544 Krtap4-6Q3V4B7 195 aa3.39□□□□□ -1.87
Vcan-202ENSMUST00000109544 Sprr2hO70559 108 aa3.36□□□□□ -1.87
Vcan-202ENSMUST00000109544 PcloQ9QYX7 5068 aa3.35□□□□□ -1.87
Vcan-202ENSMUST00000109544 Kmt2cQ8BRH4 4903 aa3.34□□□□□ -1.87
Vcan-202ENSMUST00000109544 Mt4P47945 62 aa3.32□□□□□ -1.88
Vcan-202ENSMUST00000109544 Vps13bQ80TY5 3993 aa3.29□□□□□ -1.88
Vcan-202ENSMUST00000109544 Pkhd1l1Q80ZA4 4249 aa3.29□□□□□ -1.88
Vcan-202ENSMUST00000109544 Sprr2dO70555 85 aa3.26□□□□□ -1.89
Vcan-202ENSMUST00000109544 Gm11564A2A4L9 201 aa3.25□□□□□ -1.89
Vcan-202ENSMUST00000109544 Gm11563B1AQ90 168 aa3.25□□□□□ -1.89
Retrieved 100 of 22,080 RNA–protein pairs in 61.7 ms