RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Ryr1E9PZQ0 5035 aa5.91□□□□□ -1.46
Trim11-202ENSMUST00000108809 Gm17416Q30KP4 66 aa5.9□□□□□ -1.47
Trim11-202ENSMUST00000108809 Krtap3-1A2A591 98 aa5.88□□□□□ -1.47
Trim11-202ENSMUST00000108809 Prm2P07978 107 aa5.88□□□□□ -1.47
Trim11-202ENSMUST00000108809 2210017I01RikA0A0A6YVV1 95 aa5.78□□□□□ -1.48
Trim11-202ENSMUST00000108809 Dnhd1D3Z2X2 4750 aa5.72□□□□□ -1.49
Trim11-202ENSMUST00000108809 Gm21887J3QQ04 176 aa5.66□□□□□ -1.5
Trim11-202ENSMUST00000108809 Ndufaf8A2AMZ4 74 aa5.62□□□□□ -1.51
Trim11-202ENSMUST00000108809 Kiaa1109A2AAE1 5005 aa5.62□□□□□ -1.51
Trim11-202ENSMUST00000108809 Krtap13-1Q8K198 168 aa5.61□□□□□ -1.51
Trim11-202ENSMUST00000108809 Birc6O88738 4882 aa5.6□□□□□ -1.51
Trim11-202ENSMUST00000108809 Herc2Q4U2R1 4836 aa5.59□□□□□ -1.51
Trim11-202ENSMUST00000108809 B930094E09RikQ8C4T2 136 aa5.59□□□□□ -1.51
Trim11-202ENSMUST00000108809 HydinQ80W93 5154 aa5.57□□□□□ -1.52
Trim11-202ENSMUST00000108809 BC029722A0A0N4SW31 51 aa5.54□□□□□ -1.52
Trim11-202ENSMUST00000108809 Gm19426M0QWC7 77 aa5.54□□□□□ -1.52
Trim11-202ENSMUST00000108809 2310057N15RikQ9D6T8 200 aa5.54□□□□□ -1.52
Trim11-202ENSMUST00000108809 Krtap1-5A2A590 122 aa5.51□□□□□ -1.53
Trim11-202ENSMUST00000108809 Lrp2A2ARV4 4660 aa5.51□□□□□ -1.53
Trim11-202ENSMUST00000108809 Spink7Q6IE32 76 aa5.49□□□□□ -1.53
Trim11-202ENSMUST00000108809 Gm17402F6Z0L5 76 aa5.48□□□□□ -1.53
Trim11-202ENSMUST00000108809 Sec61bQ9CQS8 96 aaKnown RBP5.43□□□□□ -1.54
Trim11-202ENSMUST00000108809 Krtap7-1Q9D3I6 87 aa5.43□□□□□ -1.54
Trim11-202ENSMUST00000108809 Gm19402J3QJV4 266 aa5.42□□□□□ -1.54
Trim11-202ENSMUST00000108809 Krtap16-3Q8C1I6 86 aa5.37□□□□□ -1.55
Trim11-202ENSMUST00000108809 Sprr2a3Q4KL71 83 aa5.35□□□□□ -1.55
Trim11-202ENSMUST00000108809 Sprr2a1Q9CQK8 83 aa5.35□□□□□ -1.55
Trim11-202ENSMUST00000108809 Gm10318A0A1W2P728 225 aa5.34□□□□□ -1.55
Trim11-202ENSMUST00000108809 Gm19668J3QMD1 248 aa5.33□□□□□ -1.56
Trim11-202ENSMUST00000108809 PcloQ9QYX7 5068 aa5.32□□□□□ -1.56
Trim11-202ENSMUST00000108809 Krtap19-1Q925H2 87 aa5.29□□□□□ -1.56
Trim11-202ENSMUST00000108809 Gm9112A2AI92 75 aa5.29□□□□□ -1.56
Trim11-202ENSMUST00000108809 Fam229aB2KGE5 128 aa5.25□□□□□ -1.57
Trim11-202ENSMUST00000108809 Crct1Q6PAI5 102 aa5.25□□□□□ -1.57
Trim11-202ENSMUST00000108809 Krtap19-3Q925H6 87 aa5.23□□□□□ -1.57
Trim11-202ENSMUST00000108809 Lce1mQ9CR91 182 aa5.23□□□□□ -1.57
Trim11-202ENSMUST00000108809 Gm40193A0A1B0GT39 78 aa5.22□□□□□ -1.57
Trim11-202ENSMUST00000108809 Camk2n1Q6QWF9 78 aa5.2□□□□□ -1.58
Trim11-202ENSMUST00000108809 Krtap1-4Q3V2D6 188 aa5.14□□□□□ -1.59
Trim11-202ENSMUST00000108809 Herc1E9PZP8 4859 aa5.11□□□□□ -1.59
Trim11-202ENSMUST00000108809 ZanO88799 5376 aa5.04□□□□□ -1.6
Trim11-202ENSMUST00000108809 Gm18596A0A1W2P860 280 aa5.04□□□□□ -1.6
Trim11-202ENSMUST00000108809 4932415D10RikA0A1W2P6U8 4986 aa5.04□□□□□ -1.6
Trim11-202ENSMUST00000108809 Hmcn2A2AJ76 5100 aa4.97□□□□□ -1.61
Trim11-202ENSMUST00000108809 Lce1jD3YUU5 139 aa4.96□□□□□ -1.62
Trim11-202ENSMUST00000108809 Krtap1-3A2A588 173 aa4.96□□□□□ -1.62
Trim11-202ENSMUST00000108809 Ush2AQ2QI47 5193 aa4.94□□□□□ -1.62
Trim11-202ENSMUST00000108809 Ubr4A2AN08 5180 aa4.94□□□□□ -1.62
Trim11-202ENSMUST00000108809 Gm9789Q8BIG3 52 aa4.9□□□□□ -1.62
Trim11-202ENSMUST00000108809 Fat4Q2PZL6 4981 aa4.88□□□□□ -1.63
Trim11-202ENSMUST00000108809 Krtap12-1Q9Z287 130 aa4.88□□□□□ -1.63
Trim11-202ENSMUST00000108809 Prm1P02319 51 aa4.88□□□□□ -1.63
Trim11-202ENSMUST00000108809 Krtap19-9aF8WH65 55 aa4.87□□□□□ -1.63
Trim11-202ENSMUST00000108809 LorP18165 486 aa4.86□□□□□ -1.63
Trim11-202ENSMUST00000108809 Gm7735D3YX18 52 aa4.85□□□□□ -1.63
Trim11-202ENSMUST00000108809 Rnf213E9Q555 5152 aaKnown RBP4.81□□□□□ -1.64
Trim11-202ENSMUST00000108809 Tnp1P10856 55 aa4.76□□□□□ -1.65
Trim11-202ENSMUST00000108809 Krtap17-1A2A5X6 109 aa4.73□□□□□ -1.65
Trim11-202ENSMUST00000108809 Krtap8-1O08633 61 aa4.71□□□□□ -1.66
Trim11-202ENSMUST00000108809 Lce1iQ9D6P5 149 aa4.67□□□□□ -1.66
Trim11-202ENSMUST00000108809 SspoQ8CG65 4998 aa4.64□□□□□ -1.67
Trim11-202ENSMUST00000108809 Lce1a2Q9D1K4 149 aa4.64□□□□□ -1.67
Trim11-202ENSMUST00000108809 Krtap19-2Q925I0 141 aa4.61□□□□□ -1.67
Trim11-202ENSMUST00000108809 2310046K23RikA0A0A6YVW6 87 aa4.59□□□□□ -1.67
Trim11-202ENSMUST00000108809 Krtap19-9bQ99NG9 58 aa4.59□□□□□ -1.67
Trim11-202ENSMUST00000108809 Krtap9-5A2A5X3 358 aa4.55□□□□□ -1.68
Trim11-202ENSMUST00000108809 Krtap9-3Q3V2C1 136 aa4.5□□□□□ -1.69
Trim11-202ENSMUST00000108809 Lce1hQ9D6R3 140 aa4.45□□□□□ -1.7
Trim11-202ENSMUST00000108809 Gm10061D3Z714 54 aa4.42□□□□□ -1.7
Trim11-202ENSMUST00000108809 Muc5bE9Q5I3 4800 aa4.32□□□□□ -1.72
Trim11-202ENSMUST00000108809 Gm6358A0A087WPH4 74 aa4.31□□□□□ -1.72
Trim11-202ENSMUST00000108809 Mt2P02798 61 aa4.3□□□□□ -1.72
Trim11-202ENSMUST00000108809 Gm11569B1AQB1 180 aa4.2□□□□□ -1.74
Trim11-202ENSMUST00000108809 Lce1dQ9D731 133 aa4.2□□□□□ -1.74
Trim11-202ENSMUST00000108809 Mdn1A2ANY6 5589 aaKnown RBP4.15□□□□□ -1.74
Trim11-202ENSMUST00000108809 Sprr2gO70558 76 aa4.11□□□□□ -1.75
Trim11-202ENSMUST00000108809 Lce1eQ9D139 143 aa4.07□□□□□ -1.76
Trim11-202ENSMUST00000108809 Sprr2dO70555 85 aa4.04□□□□□ -1.76
Trim11-202ENSMUST00000108809 Gm11938Q9D3H4 131 aa4.03□□□□□ -1.76
Trim11-202ENSMUST00000108809 Krtap22-2J3QNX6 67 aa4.02□□□□□ -1.77
Trim11-202ENSMUST00000108809 4933428G20RikQ9D3X4 101 aa3.99□□□□□ -1.77
Trim11-202ENSMUST00000108809 Gm10272F7CZ33 110 aa3.98□□□□□ -1.77
Trim11-202ENSMUST00000108809 Gm11562A0PK51 136 aa3.9□□□□□ -1.78
Trim11-202ENSMUST00000108809 Krtap4-2B1AQ85 167 aa3.88□□□□□ -1.79
Trim11-202ENSMUST00000108809 Syne1Q6ZWR6 8799 aa3.86□□□□□ -1.79
Trim11-202ENSMUST00000108809 Lce1cQ9D1C5 147 aa3.86□□□□□ -1.79
Trim11-202ENSMUST00000108809 Krtap4-6Q3V4B7 195 aa3.85□□□□□ -1.79
Trim11-202ENSMUST00000108809 Krtap31-1Q9D644 177 aa3.84□□□□□ -1.79
Trim11-202ENSMUST00000108809 Fsip2A2ARZ3 6995 aa3.83□□□□□ -1.8
Trim11-202ENSMUST00000108809 Lce1gQ9D195 139 aa3.82□□□□□ -1.8
Trim11-202ENSMUST00000108809 Syne2Q6ZWQ0 6874 aaKnown RBP3.8□□□□□ -1.8
Trim11-202ENSMUST00000108809 Krtap4-1Q3UUY3 169 aa3.76□□□□□ -1.81
Trim11-202ENSMUST00000108809 Gm11555B1AQ89 175 aa3.75□□□□□ -1.81
Trim11-202ENSMUST00000108809 Krtap19-4Q925H7 84 aa3.75□□□□□ -1.81
Trim11-202ENSMUST00000108809 Gm11596B1AQB0 205 aa3.72□□□□□ -1.81
Trim11-202ENSMUST00000108809 Lce1fB9EJP6 147 aa3.71□□□□□ -1.82
Trim11-202ENSMUST00000108809 Gm10100J3QK64 120 aa3.71□□□□□ -1.82
Trim11-202ENSMUST00000108809 Lce1a1Q9CQH5 143 aa3.71□□□□□ -1.82
Trim11-202ENSMUST00000108809 Muc16A0A140LJ72 8478 aa3.68□□□□□ -1.82
Trim11-202ENSMUST00000108809 Lce3bQ9CQM7 98 aa3.67□□□□□ -1.82
Retrieved 100 of 22,080 RNA–protein pairs in 65.7 ms