RNA–Protein interactions for RNA: ENSMUST00000102838.9

Sptbn1-203, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptbn1, Length 9,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-203ENSMUST00000102838 Hspg2Q05793 3707 aaKnown RBP3.65□□□□□ -1.83
Sptbn1-203ENSMUST00000102838 Lce3cQ91V05 98 aa3.63□□□□□ -1.83
Sptbn1-203ENSMUST00000102838 Krtap3-2Q9D638 99 aa3.62□□□□□ -1.83
Sptbn1-203ENSMUST00000102838 Krtap3-3Q9D7P0 99 aa3.62□□□□□ -1.83
Sptbn1-203ENSMUST00000102838 Fras1Q80T14 4010 aa3.62□□□□□ -1.83
Sptbn1-203ENSMUST00000102838 Krtap12-1Q9Z287 130 aa3.6□□□□□ -1.83
Sptbn1-203ENSMUST00000102838 Krtap1-4Q3V2D6 188 aa3.6□□□□□ -1.83
Sptbn1-203ENSMUST00000102838 Sprr2a3Q4KL71 83 aa3.6□□□□□ -1.83
Sptbn1-203ENSMUST00000102838 Sprr2a1Q9CQK8 83 aa3.6□□□□□ -1.83
Sptbn1-203ENSMUST00000102838 Sprr2iO70560 76 aa3.58□□□□□ -1.84
Sptbn1-203ENSMUST00000102838 PrkdcP97313 4128 aa3.58□□□□□ -1.84
Sptbn1-203ENSMUST00000102838 CubnQ9JLB4 3623 aa3.55□□□□□ -1.84
Sptbn1-203ENSMUST00000102838 Huwe1Q7TMY8 4377 aaKnown RBP3.55□□□□□ -1.84
Sptbn1-203ENSMUST00000102838 Lce3dE9Q8V1 98 aa3.5□□□□□ -1.85
Sptbn1-203ENSMUST00000102838 Lce3eF8VQJ0 98 aa3.48□□□□□ -1.85
Sptbn1-203ENSMUST00000102838 Lce3fQ6PAI4 98 aa3.48□□□□□ -1.85
Sptbn1-203ENSMUST00000102838 Dnah1E9Q8T7 4250 aa3.47□□□□□ -1.85
Sptbn1-203ENSMUST00000102838 Lce1mQ9CR91 182 aa3.47□□□□□ -1.85
Sptbn1-203ENSMUST00000102838 Gm10100J3QK64 120 aa3.44□□□□□ -1.86
Sptbn1-203ENSMUST00000102838 Krtap31-2Q8CAY5 177 aa3.41□□□□□ -1.86
Sptbn1-203ENSMUST00000102838 Lce3aQ497I5 98 aa3.4□□□□□ -1.87
Sptbn1-203ENSMUST00000102838 Gm38119A0A0A6YX29 146 aa3.4□□□□□ -1.87
Sptbn1-203ENSMUST00000102838 Sprr2eO70556 76 aa3.39□□□□□ -1.87
Sptbn1-203ENSMUST00000102838 Dnah14A0A140LIJ4 4489 aa3.35□□□□□ -1.87
Sptbn1-203ENSMUST00000102838 Krtap19-3Q925H6 87 aa3.35□□□□□ -1.87
Sptbn1-203ENSMUST00000102838 Gm10272F7CZ33 110 aa3.35□□□□□ -1.87
Sptbn1-203ENSMUST00000102838 Gm10142J3KMP7 120 aa3.34□□□□□ -1.88
Sptbn1-203ENSMUST00000102838 Lce1jD3YUU5 139 aa3.32□□□□□ -1.88
Sptbn1-203ENSMUST00000102838 Lce1gQ9D195 139 aa3.32□□□□□ -1.88
Sptbn1-203ENSMUST00000102838 Lce1iQ9D6P5 149 aa3.32□□□□□ -1.88
Sptbn1-203ENSMUST00000102838 Lce1hQ9D6R3 140 aa3.32□□□□□ -1.88
Sptbn1-203ENSMUST00000102838 Krtap16-3Q8C1I6 86 aa3.31□□□□□ -1.88
Sptbn1-203ENSMUST00000102838 Dync2h1Q45VK7 4306 aa3.3□□□□□ -1.88
Sptbn1-203ENSMUST00000102838 Gm10024A0A0A0MQA4 119 aa3.3□□□□□ -1.88
Sptbn1-203ENSMUST00000102838 Vps13dB1ART2 4390 aa3.29□□□□□ -1.88
Sptbn1-203ENSMUST00000102838 Pkhd1E9PZ36 4059 aa3.28□□□□□ -1.88
Sptbn1-203ENSMUST00000102838 Lce1bQ9D149 137 aa3.28□□□□□ -1.88
Sptbn1-203ENSMUST00000102838 Krtap9-5A2A5X3 358 aa3.25□□□□□ -1.89
Sptbn1-203ENSMUST00000102838 Lce1fB9EJP6 147 aa3.25□□□□□ -1.89
Sptbn1-203ENSMUST00000102838 Lce1cQ9D1C5 147 aa3.25□□□□□ -1.89
Sptbn1-203ENSMUST00000102838 Lce1lQ9D1G7 135 aa3.25□□□□□ -1.89
Sptbn1-203ENSMUST00000102838 Lce1dQ9D731 133 aa3.25□□□□□ -1.89
Sptbn1-203ENSMUST00000102838 Hectd4E9Q2E4 4418 aa3.25□□□□□ -1.89
Sptbn1-203ENSMUST00000102838 Prm1P02319 51 aa3.24□□□□□ -1.89
Sptbn1-203ENSMUST00000102838 Krtap22-2J3QNX6 67 aa3.23□□□□□ -1.89
Sptbn1-203ENSMUST00000102838 Ryr1E9PZQ0 5035 aa3.23□□□□□ -1.89
Sptbn1-203ENSMUST00000102838 Lce1eQ9D139 143 aa3.17□□□□□ -1.9
Sptbn1-203ENSMUST00000102838 Dnah10D3YYQ8 4591 aa3.17□□□□□ -1.9
Sptbn1-203ENSMUST00000102838 Krtap19-4Q925H7 84 aa3.16□□□□□ -1.9
Sptbn1-203ENSMUST00000102838 Pkd1O08852 4293 aa3.15□□□□□ -1.9
Sptbn1-203ENSMUST00000102838 Krtap31-1Q9D644 177 aa3.15□□□□□ -1.91
Sptbn1-203ENSMUST00000102838 Mt2P02798 61 aa3.13□□□□□ -1.91
Sptbn1-203ENSMUST00000102838 Krtap19-2Q925I0 141 aa3.11□□□□□ -1.91
Sptbn1-203ENSMUST00000102838 Sprr2hO70559 108 aa3.1□□□□□ -1.91
Sptbn1-203ENSMUST00000102838 PlecQ9QXS1 4691 aaKnown RBP3.07□□□□□ -1.92
Sptbn1-203ENSMUST00000102838 Pkhd1l1Q80ZA4 4249 aa3.07□□□□□ -1.92
Sptbn1-203ENSMUST00000102838 Dnah2P0C6F1 4456 aa3.06□□□□□ -1.92
Sptbn1-203ENSMUST00000102838 Dync1h1Q9JHU4 4644 aaKnown RBP3.06□□□□□ -1.92
Sptbn1-203ENSMUST00000102838 Dnah17Q69Z23 4481 aa3.03□□□□□ -1.92
Sptbn1-203ENSMUST00000102838 Dnah9B1AR51 4484 aa3.02□□□□□ -1.93
Sptbn1-203ENSMUST00000102838 Sprr2dO70555 85 aa3.02□□□□□ -1.93
Sptbn1-203ENSMUST00000102838 Krtap9-3Q3V2C1 136 aa3□□□□□ -1.93
Sptbn1-203ENSMUST00000102838 Dnah5Q8VHE6 4621 aa3□□□□□ -1.93
Sptbn1-203ENSMUST00000102838 Gm7735D3YX18 52 aa2.99□□□□□ -1.93
Sptbn1-203ENSMUST00000102838 Krtap4-2B1AQ85 167 aa2.99□□□□□ -1.93
Sptbn1-203ENSMUST00000102838 Mt4P47945 62 aa2.97□□□□□ -1.93
Sptbn1-203ENSMUST00000102838 Gm11569B1AQB1 180 aa2.95□□□□□ -1.94
Sptbn1-203ENSMUST00000102838 Lrp1Q91ZX7 4545 aaKnown RBP2.93□□□□□ -1.94
Sptbn1-203ENSMUST00000102838 A0A1Y7VLE6 161 aa2.91□□□□□ -1.94
Sptbn1-203ENSMUST00000102838 Dnah11E9Q7N9 4488 aa2.91□□□□□ -1.94
Sptbn1-203ENSMUST00000102838 Gm9789Q8BIG3 52 aa2.86□□□□□ -1.95
Sptbn1-203ENSMUST00000102838 Gm10061D3Z714 54 aa2.84□□□□□ -1.95
Sptbn1-203ENSMUST00000102838 SacsQ9JLC8 4582 aa2.83□□□□□ -1.96
Sptbn1-203ENSMUST00000102838 Stard9Q80TF6 4561 aa2.83□□□□□ -1.96
Sptbn1-203ENSMUST00000102838 Krtap17-1A2A5X6 109 aa2.83□□□□□ -1.96
Sptbn1-203ENSMUST00000102838 Krtap19-1Q925H2 87 aa2.82□□□□□ -1.96
Sptbn1-203ENSMUST00000102838 ApobE9Q414 4505 aa2.82□□□□□ -1.96
Sptbn1-203ENSMUST00000102838 Fat1A0A1L1SQU7 4645 aa2.81□□□□□ -1.96
Sptbn1-203ENSMUST00000102838 Sprr2bO70554 98 aa2.81□□□□□ -1.96
Sptbn1-203ENSMUST00000102838 Krtap4-6Q3V4B7 195 aa2.8□□□□□ -1.96
Sptbn1-203ENSMUST00000102838 Dnah8Q91XQ0 4731 aa2.79□□□□□ -1.96
Sptbn1-203ENSMUST00000102838 Fat2Q5F226 4351 aa2.76□□□□□ -1.97
Sptbn1-203ENSMUST00000102838 Mycbp2Q7TPH6 4711 aa2.75□□□□□ -1.97
Sptbn1-203ENSMUST00000102838 Lce1a1Q9CQH5 143 aa2.75□□□□□ -1.97
Sptbn1-203ENSMUST00000102838 Lce1a2Q9D1K4 149 aa2.75□□□□□ -1.97
Sptbn1-203ENSMUST00000102838 Mt3P28184 68 aa2.74□□□□□ -1.97
Sptbn1-203ENSMUST00000102838 Krtap4-7Q9D732 168 aa2.73□□□□□ -1.97
Sptbn1-203ENSMUST00000102838 Krtap1-3A2A588 173 aa2.73□□□□□ -1.97
Sptbn1-203ENSMUST00000102838 Ryr2E9Q401 4966 aaKnown RBP2.72□□□□□ -1.97
Sptbn1-203ENSMUST00000102838 Lrp1bQ9JI18 4599 aa2.71□□□□□ -1.98
Sptbn1-203ENSMUST00000102838 Gm11596B1AQB0 205 aa2.7□□□□□ -1.98
Sptbn1-203ENSMUST00000102838 Birc6O88738 4882 aa2.7□□□□□ -1.98
Sptbn1-203ENSMUST00000102838 Dnhd1D3Z2X2 4750 aa2.69□□□□□ -1.98
Sptbn1-203ENSMUST00000102838 2300003K06RikA2A4M0 262 aa2.68□□□□□ -1.98
Sptbn1-203ENSMUST00000102838 ZanO88799 5376 aa2.67□□□□□ -1.98
Sptbn1-203ENSMUST00000102838 Gm11562A0PK51 136 aa2.65□□□□□ -1.98
Sptbn1-203ENSMUST00000102838 Krtap4-1Q3UUY3 169 aa2.64□□□□□ -1.99
Sptbn1-203ENSMUST00000102838 Gm11938Q9D3H4 131 aa2.64□□□□□ -1.99
Sptbn1-203ENSMUST00000102838 Gm11564A2A4L9 201 aa2.63□□□□□ -1.99
Sptbn1-203ENSMUST00000102838 Gm11563B1AQ90 168 aa2.63□□□□□ -1.99
Retrieved 100 of 22,080 RNA–protein pairs in 81.9 ms