RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Krtap15-1Q9QZU5 150 aa6.35□□□□□ -1.39
Vamp1-203ENSMUST00000100942 Rnase13Q5GAM7 153 aa6.33□□□□□ -1.4
Vamp1-203ENSMUST00000100942 Herc2Q4U2R1 4836 aa6.32□□□□□ -1.4
Vamp1-203ENSMUST00000100942 Kiaa1109A2AAE1 5005 aa6.31□□□□□ -1.4
Vamp1-203ENSMUST00000100942 Birc6O88738 4882 aa6.31□□□□□ -1.4
Vamp1-203ENSMUST00000100942 Gm17606F6ZL36 78 aa6.28□□□□□ -1.4
Vamp1-203ENSMUST00000100942 Ndufaf8A2AMZ4 74 aa6.27□□□□□ -1.41
Vamp1-203ENSMUST00000100942 Gm21887J3QQ04 176 aa6.26□□□□□ -1.41
Vamp1-203ENSMUST00000100942 HydinQ80W93 5154 aa6.23□□□□□ -1.41
Vamp1-203ENSMUST00000100942 Gm17416Q30KP4 66 aa6.2□□□□□ -1.42
Vamp1-203ENSMUST00000100942 Lrp2A2ARV4 4660 aa6.1□□□□□ -1.43
Vamp1-203ENSMUST00000100942 Krtap3-1A2A591 98 aa6.09□□□□□ -1.44
Vamp1-203ENSMUST00000100942 PcloQ9QYX7 5068 aa6.06□□□□□ -1.44
Vamp1-203ENSMUST00000100942 2210017I01RikA0A0A6YVV1 95 aa6.05□□□□□ -1.44
Vamp1-203ENSMUST00000100942 Gm19426M0QWC7 77 aa6.03□□□□□ -1.44
Vamp1-203ENSMUST00000100942 Krtap7-1Q9D3I6 87 aa5.99□□□□□ -1.45
Vamp1-203ENSMUST00000100942 2310057N15RikQ9D6T8 200 aa5.98□□□□□ -1.45
Vamp1-203ENSMUST00000100942 B930094E09RikQ8C4T2 136 aa5.95□□□□□ -1.46
Vamp1-203ENSMUST00000100942 Gm40193A0A1B0GT39 78 aa5.94□□□□□ -1.46
Vamp1-203ENSMUST00000100942 Krtap13-1Q8K198 168 aa5.94□□□□□ -1.46
Vamp1-203ENSMUST00000100942 Gm10318A0A1W2P728 225 aa5.93□□□□□ -1.46
Vamp1-203ENSMUST00000100942 Sec61bQ9CQS8 96 aaKnown RBP5.93□□□□□ -1.46
Vamp1-203ENSMUST00000100942 Gm9112A2AI92 75 aa5.92□□□□□ -1.46
Vamp1-203ENSMUST00000100942 Fam229aB2KGE5 128 aa5.9□□□□□ -1.47
Vamp1-203ENSMUST00000100942 Gm19668J3QMD1 248 aa5.88□□□□□ -1.47
Vamp1-203ENSMUST00000100942 Krtap1-5A2A590 122 aa5.82□□□□□ -1.48
Vamp1-203ENSMUST00000100942 Gm19402J3QJV4 266 aa5.81□□□□□ -1.48
Vamp1-203ENSMUST00000100942 Krtap16-3Q8C1I6 86 aa5.8□□□□□ -1.48
Vamp1-203ENSMUST00000100942 Herc1E9PZP8 4859 aa5.8□□□□□ -1.48
Vamp1-203ENSMUST00000100942 BC029722A0A0N4SW31 51 aa5.78□□□□□ -1.48
Vamp1-203ENSMUST00000100942 Lce1mQ9CR91 182 aa5.77□□□□□ -1.49
Vamp1-203ENSMUST00000100942 Gm17402F6Z0L5 76 aa5.75□□□□□ -1.49
Vamp1-203ENSMUST00000100942 Crct1Q6PAI5 102 aa5.75□□□□□ -1.49
Vamp1-203ENSMUST00000100942 Krtap19-1Q925H2 87 aa5.73□□□□□ -1.49
Vamp1-203ENSMUST00000100942 Krtap19-3Q925H6 87 aa5.69□□□□□ -1.5
Vamp1-203ENSMUST00000100942 Spink7Q6IE32 76 aa5.69□□□□□ -1.5
Vamp1-203ENSMUST00000100942 Ush2AQ2QI47 5193 aa5.61□□□□□ -1.51
Vamp1-203ENSMUST00000100942 Hmcn2A2AJ76 5100 aa5.59□□□□□ -1.51
Vamp1-203ENSMUST00000100942 Ubr4A2AN08 5180 aa5.56□□□□□ -1.52
Vamp1-203ENSMUST00000100942 ZanO88799 5376 aa5.54□□□□□ -1.52
Vamp1-203ENSMUST00000100942 Krtap1-3A2A588 173 aa5.54□□□□□ -1.52
Vamp1-203ENSMUST00000100942 4932415D10RikA0A1W2P6U8 4986 aa5.51□□□□□ -1.53
Vamp1-203ENSMUST00000100942 Sprr2a3Q4KL71 83 aa5.51□□□□□ -1.53
Vamp1-203ENSMUST00000100942 Sprr2a1Q9CQK8 83 aa5.51□□□□□ -1.53
Vamp1-203ENSMUST00000100942 Gm18596A0A1W2P860 280 aa5.48□□□□□ -1.53
Vamp1-203ENSMUST00000100942 Krtap1-4Q3V2D6 188 aa5.48□□□□□ -1.53
Vamp1-203ENSMUST00000100942 Gm9789Q8BIG3 52 aa5.48□□□□□ -1.53
Vamp1-203ENSMUST00000100942 Fat4Q2PZL6 4981 aa5.42□□□□□ -1.54
Vamp1-203ENSMUST00000100942 Camk2n1Q6QWF9 78 aa5.4□□□□□ -1.54
Vamp1-203ENSMUST00000100942 Prm1P02319 51 aa5.4□□□□□ -1.55
Vamp1-203ENSMUST00000100942 LorP18165 486 aa5.38□□□□□ -1.55
Vamp1-203ENSMUST00000100942 Gm7735D3YX18 52 aa5.37□□□□□ -1.55
Vamp1-203ENSMUST00000100942 Rnf213E9Q555 5152 aaKnown RBP5.33□□□□□ -1.56
Vamp1-203ENSMUST00000100942 Lce1jD3YUU5 139 aa5.32□□□□□ -1.56
Vamp1-203ENSMUST00000100942 Krtap12-1Q9Z287 130 aa5.26□□□□□ -1.57
Vamp1-203ENSMUST00000100942 Krtap19-9aF8WH65 55 aa5.21□□□□□ -1.57
Vamp1-203ENSMUST00000100942 Tnp1P10856 55 aa5.21□□□□□ -1.57
Vamp1-203ENSMUST00000100942 Krtap17-1A2A5X6 109 aa5.13□□□□□ -1.59
Vamp1-203ENSMUST00000100942 SspoQ8CG65 4998 aa5.13□□□□□ -1.59
Vamp1-203ENSMUST00000100942 Krtap19-2Q925I0 141 aa5.04□□□□□ -1.6
Vamp1-203ENSMUST00000100942 Krtap9-5A2A5X3 358 aa5.01□□□□□ -1.61
Vamp1-203ENSMUST00000100942 Lce1iQ9D6P5 149 aa5□□□□□ -1.61
Vamp1-203ENSMUST00000100942 Lce1a2Q9D1K4 149 aa4.95□□□□□ -1.62
Vamp1-203ENSMUST00000100942 2310046K23RikA0A0A6YVW6 87 aa4.94□□□□□ -1.62
Vamp1-203ENSMUST00000100942 Gm10061D3Z714 54 aa4.92□□□□□ -1.62
Vamp1-203ENSMUST00000100942 Krtap8-1O08633 61 aa4.89□□□□□ -1.63
Vamp1-203ENSMUST00000100942 Krtap19-9bQ99NG9 58 aa4.82□□□□□ -1.64
Vamp1-203ENSMUST00000100942 Krtap9-3Q3V2C1 136 aa4.79□□□□□ -1.64
Vamp1-203ENSMUST00000100942 Muc5bE9Q5I3 4800 aa4.78□□□□□ -1.64
Vamp1-203ENSMUST00000100942 Gm6358A0A087WPH4 74 aa4.75□□□□□ -1.65
Vamp1-203ENSMUST00000100942 Mt2P02798 61 aa4.68□□□□□ -1.66
Vamp1-203ENSMUST00000100942 Lce1hQ9D6R3 140 aa4.64□□□□□ -1.67
Vamp1-203ENSMUST00000100942 Gm11569B1AQB1 180 aa4.62□□□□□ -1.67
Vamp1-203ENSMUST00000100942 Lce1dQ9D731 133 aa4.54□□□□□ -1.68
Vamp1-203ENSMUST00000100942 4933428G20RikQ9D3X4 101 aa4.47□□□□□ -1.69
Vamp1-203ENSMUST00000100942 Krtap31-1Q9D644 177 aa4.46□□□□□ -1.7
Vamp1-203ENSMUST00000100942 Mdn1A2ANY6 5589 aaKnown RBP4.42□□□□□ -1.7
Vamp1-203ENSMUST00000100942 Krtap22-2J3QNX6 67 aa4.4□□□□□ -1.71
Vamp1-203ENSMUST00000100942 Sprr2gO70558 76 aa4.38□□□□□ -1.71
Vamp1-203ENSMUST00000100942 Lce1eQ9D139 143 aa4.34□□□□□ -1.72
Vamp1-203ENSMUST00000100942 Gm11938Q9D3H4 131 aa4.29□□□□□ -1.72
Vamp1-203ENSMUST00000100942 Gm10272F7CZ33 110 aa4.25□□□□□ -1.73
Vamp1-203ENSMUST00000100942 Sprr2dO70555 85 aa4.25□□□□□ -1.73
Vamp1-203ENSMUST00000100942 Krtap31-2Q8CAY5 177 aa4.2□□□□□ -1.74
Vamp1-203ENSMUST00000100942 Krtap4-6Q3V4B7 195 aa4.2□□□□□ -1.74
Vamp1-203ENSMUST00000100942 Gm11555B1AQ89 175 aa4.19□□□□□ -1.74
Vamp1-203ENSMUST00000100942 Lce1cQ9D1C5 147 aa4.17□□□□□ -1.74
Vamp1-203ENSMUST00000100942 A0A1Y7VJH8 109 aa4.16□□□□□ -1.74
Vamp1-203ENSMUST00000100942 Syne1Q6ZWR6 8799 aa4.15□□□□□ -1.74
Vamp1-203ENSMUST00000100942 Lce1gQ9D195 139 aa4.12□□□□□ -1.75
Vamp1-203ENSMUST00000100942 Krtap4-1Q3UUY3 169 aa4.11□□□□□ -1.75
Vamp1-203ENSMUST00000100942 Krtap28-10A0A1Y7VP58 119 aa4.07□□□□□ -1.76
Vamp1-203ENSMUST00000100942 Krtap4-2B1AQ85 167 aa4.07□□□□□ -1.76
Vamp1-203ENSMUST00000100942 Gm11562A0PK51 136 aa4.05□□□□□ -1.76
Vamp1-203ENSMUST00000100942 Sprr2iO70560 76 aa4.05□□□□□ -1.76
Vamp1-203ENSMUST00000100942 Syne2Q6ZWQ0 6874 aaKnown RBP4.04□□□□□ -1.76
Vamp1-203ENSMUST00000100942 Gm11596B1AQB0 205 aa4.03□□□□□ -1.76
Vamp1-203ENSMUST00000100942 Lce1fB9EJP6 147 aa4.02□□□□□ -1.77
Vamp1-203ENSMUST00000100942 Lce1a1Q9CQH5 143 aa4.02□□□□□ -1.77
Vamp1-203ENSMUST00000100942 Gm10100J3QK64 120 aa4.01□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms