RNA–Protein interactions for RNA: ENSMUST00000095899.4

Syne1-202, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-202ENSMUST00000095899 HydinQ80W93 5154 aa4.24□□□□□ -1.73
Syne1-202ENSMUST00000095899 Cox6b2Q80ZN9 88 aa4.22□□□□□ -1.73
Syne1-202ENSMUST00000095899 Krtap15-1Q9QZU5 150 aa4.22□□□□□ -1.73
Syne1-202ENSMUST00000095899 Gm5965D3Z724 196 aa4.21□□□□□ -1.74
Syne1-202ENSMUST00000095899 CriptO70333 101 aa4.21□□□□□ -1.74
Syne1-202ENSMUST00000095899 Lce1mQ9CR91 182 aa4.21□□□□□ -1.74
Syne1-202ENSMUST00000095899 Ndufaf8A2AMZ4 74 aa4.19□□□□□ -1.74
Syne1-202ENSMUST00000095899 PcloQ9QYX7 5068 aa4.17□□□□□ -1.74
Syne1-202ENSMUST00000095899 Gm9955Q8CEJ8 102 aa4.16□□□□□ -1.74
Syne1-202ENSMUST00000095899 Gm9112A2AI92 75 aa4.15□□□□□ -1.74
Syne1-202ENSMUST00000095899 Rpl37Q9D823 97 aa4.15□□□□□ -1.74
Syne1-202ENSMUST00000095899 Lrp2A2ARV4 4660 aa4.13□□□□□ -1.75
Syne1-202ENSMUST00000095899 Krtap3-1A2A591 98 aa4.13□□□□□ -1.75
Syne1-202ENSMUST00000095899 Gm17416Q30KP4 66 aa4.12□□□□□ -1.75
Syne1-202ENSMUST00000095899 Gm10382Q3V0T5 144 aa4.09□□□□□ -1.75
Syne1-202ENSMUST00000095899 2310057N15RikQ9D6T8 200 aa4.07□□□□□ -1.76
Syne1-202ENSMUST00000095899 Gm18596A0A1W2P860 280 aa4.05□□□□□ -1.76
Syne1-202ENSMUST00000095899 Herc1E9PZP8 4859 aa4.03□□□□□ -1.76
Syne1-202ENSMUST00000095899 2210017I01RikA0A0A6YVV1 95 aa4.02□□□□□ -1.77
Syne1-202ENSMUST00000095899 Gm17606F6ZL36 78 aa3.99□□□□□ -1.77
Syne1-202ENSMUST00000095899 Krtap13-1Q8K198 168 aa3.95□□□□□ -1.78
Syne1-202ENSMUST00000095899 Prm1P02319 51 aa3.93□□□□□ -1.78
Syne1-202ENSMUST00000095899 Gm9789Q8BIG3 52 aa3.92□□□□□ -1.78
Syne1-202ENSMUST00000095899 Krtap7-1Q9D3I6 87 aa3.91□□□□□ -1.78
Syne1-202ENSMUST00000095899 Krtap1-5A2A590 122 aa3.91□□□□□ -1.78
Syne1-202ENSMUST00000095899 Krtap16-3Q8C1I6 86 aa3.9□□□□□ -1.79
Syne1-202ENSMUST00000095899 Ush2AQ2QI47 5193 aa3.9□□□□□ -1.79
Syne1-202ENSMUST00000095899 Gm7735D3YX18 52 aa3.89□□□□□ -1.79
Syne1-202ENSMUST00000095899 Gm19426M0QWC7 77 aa3.87□□□□□ -1.79
Syne1-202ENSMUST00000095899 B930094E09RikQ8C4T2 136 aa3.86□□□□□ -1.79
Syne1-202ENSMUST00000095899 Hmcn2A2AJ76 5100 aa3.86□□□□□ -1.79
Syne1-202ENSMUST00000095899 Camk2n1Q6QWF9 78 aa3.85□□□□□ -1.79
Syne1-202ENSMUST00000095899 Krtap19-1Q925H2 87 aa3.85□□□□□ -1.79
Syne1-202ENSMUST00000095899 Gm40193A0A1B0GT39 78 aa3.84□□□□□ -1.79
Syne1-202ENSMUST00000095899 Ubr4A2AN08 5180 aa3.82□□□□□ -1.8
Syne1-202ENSMUST00000095899 Gm19402J3QJV4 266 aa3.8□□□□□ -1.8
Syne1-202ENSMUST00000095899 Krtap19-3Q925H6 87 aa3.8□□□□□ -1.8
Syne1-202ENSMUST00000095899 Fam229aB2KGE5 128 aa3.8□□□□□ -1.8
Syne1-202ENSMUST00000095899 Crct1Q6PAI5 102 aa3.79□□□□□ -1.8
Syne1-202ENSMUST00000095899 ZanO88799 5376 aa3.78□□□□□ -1.8
Syne1-202ENSMUST00000095899 Krtap1-3A2A588 173 aa3.77□□□□□ -1.81
Syne1-202ENSMUST00000095899 4932415D10RikA0A1W2P6U8 4986 aa3.77□□□□□ -1.81
Syne1-202ENSMUST00000095899 BC029722A0A0N4SW31 51 aa3.75□□□□□ -1.81
Syne1-202ENSMUST00000095899 Gm10318A0A1W2P728 225 aa3.74□□□□□ -1.81
Syne1-202ENSMUST00000095899 Gm17402F6Z0L5 76 aa3.74□□□□□ -1.81
Syne1-202ENSMUST00000095899 Gm19668J3QMD1 248 aa3.74□□□□□ -1.81
Syne1-202ENSMUST00000095899 Sprr2a3Q4KL71 83 aa3.73□□□□□ -1.81
Syne1-202ENSMUST00000095899 Sprr2a1Q9CQK8 83 aa3.73□□□□□ -1.81
Syne1-202ENSMUST00000095899 Fat4Q2PZL6 4981 aa3.66□□□□□ -1.82
Syne1-202ENSMUST00000095899 Rnf213E9Q555 5152 aaKnown RBP3.65□□□□□ -1.82
Syne1-202ENSMUST00000095899 A0A1Y7VLE6 161 aa3.65□□□□□ -1.82
Syne1-202ENSMUST00000095899 Krtap31-1Q9D644 177 aa3.64□□□□□ -1.83
Syne1-202ENSMUST00000095899 Krtap1-4Q3V2D6 188 aa3.64□□□□□ -1.83
Syne1-202ENSMUST00000095899 LorP18165 486 aa3.6□□□□□ -1.83
Syne1-202ENSMUST00000095899 Lce1jD3YUU5 139 aa3.6□□□□□ -1.83
Syne1-202ENSMUST00000095899 Krtap31-2Q8CAY5 177 aa3.57□□□□□ -1.84
Syne1-202ENSMUST00000095899 SspoQ8CG65 4998 aa3.51□□□□□ -1.85
Syne1-202ENSMUST00000095899 Krtap17-1A2A5X6 109 aa3.51□□□□□ -1.85
Syne1-202ENSMUST00000095899 Spink7Q6IE32 76 aa3.47□□□□□ -1.85
Syne1-202ENSMUST00000095899 Krtap12-1Q9Z287 130 aa3.47□□□□□ -1.85
Syne1-202ENSMUST00000095899 Gm10061D3Z714 54 aa3.46□□□□□ -1.86
Syne1-202ENSMUST00000095899 Krtap19-9aF8WH65 55 aa3.43□□□□□ -1.86
Syne1-202ENSMUST00000095899 Gm11562A0PK51 136 aa3.42□□□□□ -1.86
Syne1-202ENSMUST00000095899 Lce1iQ9D6P5 149 aa3.39□□□□□ -1.87
Syne1-202ENSMUST00000095899 Lce1a2Q9D1K4 149 aa3.37□□□□□ -1.87
Syne1-202ENSMUST00000095899 Tnp1P10856 55 aa3.34□□□□□ -1.87
Syne1-202ENSMUST00000095899 Krtap19-2Q925I0 141 aa3.34□□□□□ -1.87
Syne1-202ENSMUST00000095899 Gm11569B1AQB1 180 aa3.32□□□□□ -1.88
Syne1-202ENSMUST00000095899 Krtap8-1O08633 61 aa3.29□□□□□ -1.88
Syne1-202ENSMUST00000095899 Krtap9-5A2A5X3 358 aa3.29□□□□□ -1.88
Syne1-202ENSMUST00000095899 A0A1Y7VJH8 109 aa3.28□□□□□ -1.88
Syne1-202ENSMUST00000095899 Krtap9-3Q3V2C1 136 aa3.23□□□□□ -1.89
Syne1-202ENSMUST00000095899 Muc5bE9Q5I3 4800 aa3.23□□□□□ -1.89
Syne1-202ENSMUST00000095899 2310046K23RikA0A0A6YVW6 87 aa3.21□□□□□ -1.9
Syne1-202ENSMUST00000095899 Krtap4-2B1AQ85 167 aa3.2□□□□□ -1.9
Syne1-202ENSMUST00000095899 Krtap19-9bQ99NG9 58 aa3.19□□□□□ -1.9
Syne1-202ENSMUST00000095899 Lce1hQ9D6R3 140 aa3.18□□□□□ -1.9
Syne1-202ENSMUST00000095899 Lce1gQ9D195 139 aa3.18□□□□□ -1.9
Syne1-202ENSMUST00000095899 Mdn1A2ANY6 5589 aaKnown RBP3.16□□□□□ -1.9
Syne1-202ENSMUST00000095899 Gm6358A0A087WPH4 74 aa3.16□□□□□ -1.9
Syne1-202ENSMUST00000095899 Krtap4-1Q3UUY3 169 aa3.15□□□□□ -1.91
Syne1-202ENSMUST00000095899 Gm11555B1AQ89 175 aa3.14□□□□□ -1.91
Syne1-202ENSMUST00000095899 Krtap28-10A0A1Y7VP58 119 aa3.14□□□□□ -1.91
Syne1-202ENSMUST00000095899 Mt2P02798 61 aa3.08□□□□□ -1.92
Syne1-202ENSMUST00000095899 Gm11596B1AQB0 205 aa3.06□□□□□ -1.92
Syne1-202ENSMUST00000095899 Krtap4-6Q3V4B7 195 aa3.04□□□□□ -1.92
Syne1-202ENSMUST00000095899 Syne2Q6ZWQ0 6874 aaKnown RBP3.03□□□□□ -1.92
Syne1-202ENSMUST00000095899 Krtap28-13A0A087WQP5 138 aa2.99□□□□□ -1.93
Syne1-202ENSMUST00000095899 Lce1dQ9D731 133 aa2.96□□□□□ -1.94
Syne1-202ENSMUST00000095899 A030005L19RikA0A1Y7VIU2 113 aa2.92□□□□□ -1.94
Syne1-202ENSMUST00000095899 Gm11564A2A4L9 201 aa2.91□□□□□ -1.94
Syne1-202ENSMUST00000095899 Gm11563B1AQ90 168 aa2.91□□□□□ -1.94
Syne1-202ENSMUST00000095899 Gm11595B1AQA7 289 aa2.91□□□□□ -1.94
Syne1-202ENSMUST00000095899 Krtap4-8B1AQA8 209 aa2.91□□□□□ -1.94
Syne1-202ENSMUST00000095899 Krtap4-7Q9D732 168 aa2.91□□□□□ -1.94
Syne1-202ENSMUST00000095899 A030005K14RikA0A1Y7VNY1 122 aa2.89□□□□□ -1.95
Syne1-202ENSMUST00000095899 Lce1eQ9D139 143 aa2.88□□□□□ -1.95
Syne1-202ENSMUST00000095899 Krtap22-2J3QNX6 67 aa2.87□□□□□ -1.95
Syne1-202ENSMUST00000095899 4933428G20RikQ9D3X4 101 aa2.87□□□□□ -1.95
Syne1-202ENSMUST00000095899 Sprr2gO70558 76 aa2.84□□□□□ -1.95
Retrieved 100 of 22,080 RNA–protein pairs in 117.1 ms