RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Uqcr11Q9CPX8 56 aa4.3□□□□□ -1.72
Trim40-201ENSMUST00000087158 Defb13Q8R2I4 64 aa4.3□□□□□ -1.72
Trim40-201ENSMUST00000087158 Kiaa1109A2AAE1 5005 aa4.29□□□□□ -1.72
Trim40-201ENSMUST00000087158 Rps29P62274 56 aa4.29□□□□□ -1.72
Trim40-201ENSMUST00000087158 Rnase13Q5GAM7 153 aa4.28□□□□□ -1.72
Trim40-201ENSMUST00000087158 Q8BGJ3 129 aa4.28□□□□□ -1.72
Trim40-201ENSMUST00000087158 Lce1hQ9D6R3 140 aa4.28□□□□□ -1.72
Trim40-201ENSMUST00000087158 Mp68P56379 58 aa4.27□□□□□ -1.73
Trim40-201ENSMUST00000087158 Abca13Q5SSE9 5034 aa4.26□□□□□ -1.73
Trim40-201ENSMUST00000087158 Dnah8Q91XQ0 4731 aa4.25□□□□□ -1.73
Trim40-201ENSMUST00000087158 Gm18596A0A1W2P860 280 aa4.25□□□□□ -1.73
Trim40-201ENSMUST00000087158 HydinQ80W93 5154 aa4.25□□□□□ -1.73
Trim40-201ENSMUST00000087158 Lce1bQ9D149 137 aa4.24□□□□□ -1.73
Trim40-201ENSMUST00000087158 2310057N15RikQ9D6T8 200 aa4.24□□□□□ -1.73
Trim40-201ENSMUST00000087158 Vps13bQ80TY5 3993 aa4.24□□□□□ -1.73
Trim40-201ENSMUST00000087158 Krtap19-5O08632 62 aa4.23□□□□□ -1.73
Trim40-201ENSMUST00000087158 Pla2g10Q9QXX3 151 aa4.23□□□□□ -1.73
Trim40-201ENSMUST00000087158 Lce1a1Q9CQH5 143 aa4.22□□□□□ -1.73
Trim40-201ENSMUST00000087158 Lce1gQ9D195 139 aa4.22□□□□□ -1.73
Trim40-201ENSMUST00000087158 Pkhd1l1Q80ZA4 4249 aa4.21□□□□□ -1.74
Trim40-201ENSMUST00000087158 Herc1E9PZP8 4859 aa4.2□□□□□ -1.74
Trim40-201ENSMUST00000087158 Lrp1Q91ZX7 4545 aaKnown RBP4.19□□□□□ -1.74
Trim40-201ENSMUST00000087158 2310079G19RikQ9D6L6 185 aa4.17□□□□□ -1.74
Trim40-201ENSMUST00000087158 Dnhd1D3Z2X2 4750 aa4.17□□□□□ -1.74
Trim40-201ENSMUST00000087158 Mycbp2Q7TPH6 4711 aa4.17□□□□□ -1.74
Trim40-201ENSMUST00000087158 Gm10999F6Q4M4 69 aa4.16□□□□□ -1.74
Trim40-201ENSMUST00000087158 Romo1P60603 79 aa4.15□□□□□ -1.74
Trim40-201ENSMUST00000087158 D6Ertd527eA0A0N4SWI3 464 aa4.15□□□□□ -1.75
Trim40-201ENSMUST00000087158 Fat3Q8BNA6 4555 aa4.13□□□□□ -1.75
Trim40-201ENSMUST00000087158 LorP18165 486 aa4.13□□□□□ -1.75
Trim40-201ENSMUST00000087158 A930033H14RikG5E8X6 103 aa4.12□□□□□ -1.75
Trim40-201ENSMUST00000087158 Gm5767A0A0J9YTU8 78 aa4.1□□□□□ -1.75
Trim40-201ENSMUST00000087158 Gm9736A0A1W2P7N1 277 aa4.09□□□□□ -1.76
Trim40-201ENSMUST00000087158 Gm4491E0CX42 125 aa4.07□□□□□ -1.76
Trim40-201ENSMUST00000087158 Defb1P56386 69 aa4.06□□□□□ -1.76
Trim40-201ENSMUST00000087158 4930507D05RikQ8C9C9 103 aa4.06□□□□□ -1.76
Trim40-201ENSMUST00000087158 Lrp2A2ARV4 4660 aa4.05□□□□□ -1.76
Trim40-201ENSMUST00000087158 Gm5965D3Z724 196 aa4.04□□□□□ -1.76
Trim40-201ENSMUST00000087158 Lce1eQ9D139 143 aa4□□□□□ -1.77
Trim40-201ENSMUST00000087158 Rpl37Q9D823 97 aa3.98□□□□□ -1.77
Trim40-201ENSMUST00000087158 Ush2AQ2QI47 5193 aa3.97□□□□□ -1.77
Trim40-201ENSMUST00000087158 Gm20537G3UYK7 97 aa3.95□□□□□ -1.78
Trim40-201ENSMUST00000087158 Fam229aB2KGE5 128 aa3.94□□□□□ -1.78
Trim40-201ENSMUST00000087158 Cox6b2Q80ZN9 88 aa3.94□□□□□ -1.78
Trim40-201ENSMUST00000087158 Lce1lQ9D1G7 135 aa3.94□□□□□ -1.78
Trim40-201ENSMUST00000087158 Ubr4A2AN08 5180 aa3.93□□□□□ -1.78
Trim40-201ENSMUST00000087158 Gm7735D3YX18 52 aa3.93□□□□□ -1.78
Trim40-201ENSMUST00000087158 Prm1P02319 51 aa3.92□□□□□ -1.78
Trim40-201ENSMUST00000087158 4932415D10RikA0A1W2P6U8 4986 aa3.91□□□□□ -1.78
Trim40-201ENSMUST00000087158 Gm17416Q30KP4 66 aa3.91□□□□□ -1.78
Trim40-201ENSMUST00000087158 Gm9789Q8BIG3 52 aa3.88□□□□□ -1.79
Trim40-201ENSMUST00000087158 Gm3880A0A1B0GSB3 72 aa3.87□□□□□ -1.79
Trim40-201ENSMUST00000087158 Hmcn2A2AJ76 5100 aa3.86□□□□□ -1.79
Trim40-201ENSMUST00000087158 Ndufaf8A2AMZ4 74 aa3.86□□□□□ -1.79
Trim40-201ENSMUST00000087158 Gm11559Q9D3H7 191 aa3.82□□□□□ -1.8
Trim40-201ENSMUST00000087158 Gm9955Q8CEJ8 102 aa3.82□□□□□ -1.8
Trim40-201ENSMUST00000087158 Lce1dQ9D731 133 aa3.8□□□□□ -1.8
Trim40-201ENSMUST00000087158 Gm11562A0PK51 136 aa3.8□□□□□ -1.8
Trim40-201ENSMUST00000087158 Gm17606F6ZL36 78 aa3.8□□□□□ -1.8
Trim40-201ENSMUST00000087158 CriptO70333 101 aa3.76□□□□□ -1.81
Trim40-201ENSMUST00000087158 Gm10382Q3V0T5 144 aa3.76□□□□□ -1.81
Trim40-201ENSMUST00000087158 Camk2n1Q6QWF9 78 aa3.7□□□□□ -1.82
Trim40-201ENSMUST00000087158 Krtap13-1Q8K198 168 aa3.7□□□□□ -1.82
Trim40-201ENSMUST00000087158 Gm9112A2AI92 75 aa3.68□□□□□ -1.82
Trim40-201ENSMUST00000087158 Krtap1-5A2A590 122 aa3.64□□□□□ -1.83
Trim40-201ENSMUST00000087158 Krtap16-3Q8C1I6 86 aa3.64□□□□□ -1.83
Trim40-201ENSMUST00000087158 Crct1Q6PAI5 102 aa3.62□□□□□ -1.83
Trim40-201ENSMUST00000087158 BC029722A0A0N4SW31 51 aa3.62□□□□□ -1.83
Trim40-201ENSMUST00000087158 Krtap1-3A2A588 173 aa3.62□□□□□ -1.83
Trim40-201ENSMUST00000087158 ZanO88799 5376 aa3.62□□□□□ -1.83
Trim40-201ENSMUST00000087158 Krtap19-1Q925H2 87 aa3.6□□□□□ -1.83
Trim40-201ENSMUST00000087158 B930094E09RikQ8C4T2 136 aa3.59□□□□□ -1.83
Trim40-201ENSMUST00000087158 Krtap19-3Q925H6 87 aa3.58□□□□□ -1.84
Trim40-201ENSMUST00000087158 Fat4Q2PZL6 4981 aa3.56□□□□□ -1.84
Trim40-201ENSMUST00000087158 Gm19426M0QWC7 77 aa3.55□□□□□ -1.84
Trim40-201ENSMUST00000087158 Gm10318A0A1W2P728 225 aa3.54□□□□□ -1.84
Trim40-201ENSMUST00000087158 Krtap7-1Q9D3I6 87 aa3.53□□□□□ -1.84
Trim40-201ENSMUST00000087158 Gm17402F6Z0L5 76 aa3.5□□□□□ -1.85
Trim40-201ENSMUST00000087158 Rnf213E9Q555 5152 aaKnown RBP3.49□□□□□ -1.85
Trim40-201ENSMUST00000087158 Gm10061D3Z714 54 aa3.45□□□□□ -1.86
Trim40-201ENSMUST00000087158 Gm45618A0A1B0GSA0 219 aa3.44□□□□□ -1.86
Trim40-201ENSMUST00000087158 Gm40193A0A1B0GT39 78 aa3.44□□□□□ -1.86
Trim40-201ENSMUST00000087158 Gm10100J3QK64 120 aa3.43□□□□□ -1.86
Trim40-201ENSMUST00000087158 Krtap1-4Q3V2D6 188 aa3.43□□□□□ -1.86
Trim40-201ENSMUST00000087158 Spink7Q6IE32 76 aa3.43□□□□□ -1.86
Trim40-201ENSMUST00000087158 Gm11569B1AQB1 180 aa3.43□□□□□ -1.86
Trim40-201ENSMUST00000087158 Sprr2a3Q4KL71 83 aa3.41□□□□□ -1.86
Trim40-201ENSMUST00000087158 Sprr2a1Q9CQK8 83 aa3.41□□□□□ -1.86
Trim40-201ENSMUST00000087158 Syne2Q6ZWQ0 6874 aaKnown RBP3.36□□□□□ -1.87
Trim40-201ENSMUST00000087158 Krtap9-5A2A5X3 358 aa3.31□□□□□ -1.88
Trim40-201ENSMUST00000087158 Krtap12-1Q9Z287 130 aa3.31□□□□□ -1.88
Trim40-201ENSMUST00000087158 SspoQ8CG65 4998 aa3.3□□□□□ -1.88
Trim40-201ENSMUST00000087158 Krtap19-9aF8WH65 55 aa3.29□□□□□ -1.88
Trim40-201ENSMUST00000087158 Gm11596B1AQB0 205 aa3.23□□□□□ -1.89
Trim40-201ENSMUST00000087158 Krtap4-6Q3V4B7 195 aa3.19□□□□□ -1.9
Trim40-201ENSMUST00000087158 Krtap19-2Q925I0 141 aa3.19□□□□□ -1.9
Trim40-201ENSMUST00000087158 Lce1kJ3QP15 125 aa3.16□□□□□ -1.9
Trim40-201ENSMUST00000087158 Mdn1A2ANY6 5589 aaKnown RBP3.16□□□□□ -1.9
Trim40-201ENSMUST00000087158 Muc5bE9Q5I3 4800 aa3.14□□□□□ -1.91
Trim40-201ENSMUST00000087158 Lce1iQ9D6P5 149 aa3.1□□□□□ -1.91
Retrieved 100 of 22,080 RNA–protein pairs in 83.7 ms